RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 ADAMTS3O15072 1205 aa13.86□□□□□ -0.19
CHD4-203ENST00000535717 CYBAP13498 195 aa13.86□□□□□ -0.19
CHD4-203ENST00000535717 EDNRBP24530 442 aa13.86□□□□□ -0.19
CHD4-203ENST00000535717 CCND3P30281 292 aaPredicted RBP13.86□□□□□ -0.19
CHD4-203ENST00000535717 MRPL12P52815 198 aaKnown RBP13.86□□□□□ -0.19
CHD4-203ENST00000535717 PWP2Q15269 919 aaKnown RBP13.86□□□□□ -0.19
CHD4-203ENST00000535717 SMARCC2Q8TAQ2 1214 aa13.86□□□□□ -0.19
CHD4-203ENST00000535717 MORC4Q8TE76 937 aa13.86□□□□□ -0.19
CHD4-203ENST00000535717 NSUN6Q8TEA1 469 aaKnown RBP13.86□□□□□ -0.19
CHD4-203ENST00000535717 CCDC12Q8WUD4 166 aaPredicted RBP13.86□□□□□ -0.19
CHD4-203ENST00000535717 ZMYND12Q9H0C1 365 aa13.86□□□□□ -0.19
CHD4-203ENST00000535717 PXMP2Q9NR77 195 aa13.86□□□□□ -0.19
CHD4-203ENST00000535717 RPTORQ8N122 1335 aa13.86□□□□□ -0.19
CHD4-203ENST00000535717 ZNF865P0CJ78 1059 aaPredicted RBP13.85□□□□□ -0.19
CHD4-203ENST00000535717 EIF2AK2P19525 551 aaKnown RBP13.85□□□□□ -0.19
CHD4-203ENST00000535717 ARHGEF16Q5VV41 709 aa13.85□□□□□ -0.19
CHD4-203ENST00000535717 TEX2Q8IWB9 1127 aa13.85□□□□□ -0.19
CHD4-203ENST00000535717 KATNBL1Q9H079 304 aa13.85□□□□□ -0.19
CHD4-203ENST00000535717 C6orf50Q9HD87 102 aa13.85□□□□□ -0.19
CHD4-203ENST00000535717 HMX1Q9NP08 348 aaPredicted RBP13.85□□□□□ -0.19
CHD4-203ENST00000535717 GJB4Q9NTQ9 266 aa13.85□□□□□ -0.19
CHD4-203ENST00000535717 NRBP1Q9UHY1 535 aa13.85□□□□□ -0.19
CHD4-203ENST00000535717 CNPY2Q9Y2B0 182 aa13.85□□□□□ -0.19
CHD4-203ENST00000535717 BRCA2P51587 3418 aa13.85□□□□□ -0.19
CHD4-203ENST00000535717 CLK2P49760 499 aaKnown RBP13.84□□□□□ -0.19
CHD4-203ENST00000535717 NLRP5P59047 1200 aa13.84□□□□□ -0.19
CHD4-203ENST00000535717 PDE4DQ08499 809 aa13.84□□□□□ -0.19
CHD4-203ENST00000535717 ACVR2BQ13705 512 aa13.84□□□□□ -0.19
CHD4-203ENST00000535717 CCDC148Q8NFR7 591 aa13.84□□□□□ -0.19
CHD4-203ENST00000535717 IL31RAQ8NI17 732 aa13.84□□□□□ -0.19
CHD4-203ENST00000535717 WASF1Q92558 559 aa13.84□□□□□ -0.19
CHD4-203ENST00000535717 IWS1Q96ST2 819 aa13.84□□□□□ -0.19
CHD4-203ENST00000535717 PDCD2LQ9BRP1 358 aa13.84□□□□□ -0.19
CHD4-203ENST00000535717 ALG1Q9BT22 464 aa13.84□□□□□ -0.19
CHD4-203ENST00000535717 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.84□□□□□ -0.19
CHD4-203ENST00000535717 RNF208Q9H0X6 261 aa13.84□□□□□ -0.19
CHD4-203ENST00000535717 GLT8D2Q9H1C3 349 aa13.84□□□□□ -0.19
CHD4-203ENST00000535717 ABHD16BQ9H3Z7 469 aa13.84□□□□□ -0.19
CHD4-203ENST00000535717 PAK6Q9NQU5 681 aaPredicted RBP13.84□□□□□ -0.19
CHD4-203ENST00000535717 TMEM260Q9NX78 707 aa13.84□□□□□ -0.19
CHD4-203ENST00000535717 FRMPD4Q14CM0 1322 aa13.84□□□□□ -0.19
CHD4-203ENST00000535717 B4DLN1 442 aa13.83□□□□□ -0.2
CHD4-203ENST00000535717 NR3C2P08235 984 aa13.83□□□□□ -0.2
CHD4-203ENST00000535717 CNGA1P29973 690 aa13.83□□□□□ -0.2
CHD4-203ENST00000535717 GNA11P29992 359 aa13.83□□□□□ -0.2
CHD4-203ENST00000535717 PGM5Q15124 567 aa13.83□□□□□ -0.2
CHD4-203ENST00000535717 NPY5RQ15761 445 aa13.83□□□□□ -0.2
CHD4-203ENST00000535717 EEPD1Q7L9B9 569 aa13.83□□□□□ -0.2
CHD4-203ENST00000535717 FBXO16Q8IX29 292 aaPredicted RBP13.83□□□□□ -0.2
CHD4-203ENST00000535717 FAM177A1Q8N128 213 aaPredicted RBP13.83□□□□□ -0.2
CHD4-203ENST00000535717 SNX21Q969T3 373 aa13.83□□□□□ -0.2
CHD4-203ENST00000535717 MPHOSPH6Q99547 160 aaKnown RBP13.83□□□□□ -0.2
CHD4-203ENST00000535717 VTA1Q9NP79 307 aa13.83□□□□□ -0.2
CHD4-203ENST00000535717 ZHX1Q9UKY1 873 aaPredicted RBP13.83□□□□□ -0.2
CHD4-203ENST00000535717 PCDHA6Q9UN73 950 aa13.83□□□□□ -0.2
CHD4-203ENST00000535717 KCNJ14Q9UNX9 436 aa13.83□□□□□ -0.2
CHD4-203ENST00000535717 PCDHA8Q9Y5H6 950 aa13.83□□□□□ -0.2
CHD4-203ENST00000535717 LRRC37A2A6NM11 1700 aa13.83□□□□□ -0.2
CHD4-203ENST00000535717 KIAA0100Q14667 2235 aaKnown RBP13.82□□□□□ -0.2
CHD4-203ENST00000535717 CCDC85CA6NKD9 419 aa13.82□□□□□ -0.2
CHD4-203ENST00000535717 SPDYE3A6NKU9 549 aa13.82□□□□□ -0.2
CHD4-203ENST00000535717 SEPT4O43236 478 aa13.82□□□□□ -0.2
CHD4-203ENST00000535717 FOSP01100 380 aaPredicted RBP13.82□□□□□ -0.2
CHD4-203ENST00000535717 GJB1P08034 283 aa13.82□□□□□ -0.2
CHD4-203ENST00000535717 MYCLP12524 364 aaPredicted RBP13.82□□□□□ -0.2
CHD4-203ENST00000535717 HMGN5P82970 282 aaKnown RBP13.82□□□□□ -0.2
CHD4-203ENST00000535717 CUL4AQ13619 759 aa13.82□□□□□ -0.2
CHD4-203ENST00000535717 STXBP2Q15833 593 aa13.82□□□□□ -0.2
CHD4-203ENST00000535717 CCDC144BQ3MJ40 725 aa13.82□□□□□ -0.2
CHD4-203ENST00000535717 JAKMIP3Q5VZ66 844 aa13.82□□□□□ -0.2
CHD4-203ENST00000535717 TAPT1Q6NXT6 567 aa13.82□□□□□ -0.2
CHD4-203ENST00000535717 VSIG10LQ86VR7 867 aa13.82□□□□□ -0.2
CHD4-203ENST00000535717 REXO1Q8N1G1 1221 aaKnown RBP13.82□□□□□ -0.2
CHD4-203ENST00000535717 BICD2Q8TD16 824 aa13.82□□□□□ -0.2
CHD4-203ENST00000535717 PGBD1Q96JS3 809 aa13.82□□□□□ -0.2
CHD4-203ENST00000535717 DEFB118Q96PH6 123 aa13.82□□□□□ -0.2
CHD4-203ENST00000535717 PHF20Q9BVI0 1012 aa13.82□□□□□ -0.2
CHD4-203ENST00000535717 PDGFCQ9NRA1 345 aa13.82□□□□□ -0.2
CHD4-203ENST00000535717 PCDHA4Q9UN74 947 aa13.82□□□□□ -0.2
CHD4-203ENST00000535717 K7ELQ4 463 aaPredicted RBP13.81□□□□□ -0.2
CHD4-203ENST00000535717 EIF3JO75822 258 aaKnown RBP13.81□□□□□ -0.2
CHD4-203ENST00000535717 XBP1P17861 261 aa13.81□□□□□ -0.2
CHD4-203ENST00000535717 CCND2P30279 289 aa13.81□□□□□ -0.2
CHD4-203ENST00000535717 FOSBP53539 338 aa13.81□□□□□ -0.2
CHD4-203ENST00000535717 MRPS9P82933 396 aaKnown RBP13.81□□□□□ -0.2
CHD4-203ENST00000535717 AP3B2Q13367 1082 aa13.81□□□□□ -0.2
CHD4-203ENST00000535717 ANO1Q5XXA6 986 aa13.81□□□□□ -0.2
CHD4-203ENST00000535717 LHX8Q68G74 356 aa13.81□□□□□ -0.2
CHD4-203ENST00000535717 GALNT17Q6IS24 598 aa13.81□□□□□ -0.2
CHD4-203ENST00000535717 BLIDQ8IZY5 108 aa13.81□□□□□ -0.2
CHD4-203ENST00000535717 DAGLBQ8NCG7 672 aa13.81□□□□□ -0.2
CHD4-203ENST00000535717 RASGRP4Q8TDF6 673 aa13.81□□□□□ -0.2
CHD4-203ENST00000535717 ZFP91Q96JP5 570 aaPredicted RBP13.81□□□□□ -0.2
CHD4-203ENST00000535717 TMEM106CQ9BVX2 250 aa13.81□□□□□ -0.2
CHD4-203ENST00000535717 ANO3Q9BYT9 981 aa13.81□□□□□ -0.2
CHD4-203ENST00000535717 DDX20Q9UHI6 824 aaKnown RBP13.81□□□□□ -0.2
CHD4-203ENST00000535717 FAM184BQ9ULE4 1060 aa13.81□□□□□ -0.2
CHD4-203ENST00000535717 RBM47A0AV96 593 aaKnown RBP13.8□□□□□ -0.2
CHD4-203ENST00000535717 POTEFA5A3E0 1075 aa13.8□□□□□ -0.2
CHD4-203ENST00000535717 M0R2N6 131 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms