RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 ZNF669Q96BR6 464 aaPredicted RBP7.89□□□□□ -1.15
PRKDC-205ENST00000535375 PEX11GQ96HA9 241 aa7.89□□□□□ -1.15
PRKDC-205ENST00000535375 MTA3Q9BTC8 594 aa7.89□□□□□ -1.15
PRKDC-205ENST00000535375 AARSD1Q9BTE6 412 aaKnown RBP7.89□□□□□ -1.15
PRKDC-205ENST00000535375 CCDC113Q9H0I3 377 aa7.89□□□□□ -1.15
PRKDC-205ENST00000535375 GCM1Q9NP62 436 aa7.89□□□□□ -1.15
PRKDC-205ENST00000535375 IRAK3Q9Y616 596 aa7.89□□□□□ -1.15
PRKDC-205ENST00000535375 N4BP3O15049 544 aa7.88□□□□□ -1.15
PRKDC-205ENST00000535375 GTF2A2P52657 109 aa7.88□□□□□ -1.15
PRKDC-205ENST00000535375 PRR5P85299 388 aa7.88□□□□□ -1.15
PRKDC-205ENST00000535375 RBL2Q08999 1139 aa7.88□□□□□ -1.15
PRKDC-205ENST00000535375 MAP4K2Q12851 820 aa7.88□□□□□ -1.15
PRKDC-205ENST00000535375 LDHDQ86WU2 507 aa7.88□□□□□ -1.15
PRKDC-205ENST00000535375 NETO2Q8NC67 525 aa7.88□□□□□ -1.15
PRKDC-205ENST00000535375 KREMEN2Q8NCW0 462 aa7.88□□□□□ -1.15
PRKDC-205ENST00000535375 SREK1Q8WXA9 508 aaKnown RBP7.88□□□□□ -1.15
PRKDC-205ENST00000535375 CHAMP1Q96JM3 812 aa7.88□□□□□ -1.15
PRKDC-205ENST00000535375 MSRB2Q9Y3D2 182 aa7.88□□□□□ -1.15
PRKDC-205ENST00000535375 TRAV20A0A0B4J274 112 aa7.87□□□□□ -1.15
PRKDC-205ENST00000535375 KRTAP4-8A0A0G2JLE6 195 aa7.87□□□□□ -1.15
PRKDC-205ENST00000535375 C22orf46C9J442 243 aa7.87□□□□□ -1.15
PRKDC-205ENST00000535375 RFXAPO00287 272 aa7.87□□□□□ -1.15
PRKDC-205ENST00000535375 PRODHO43272 600 aa7.87□□□□□ -1.15
PRKDC-205ENST00000535375 CDR1P51861 262 aa7.87□□□□□ -1.15
PRKDC-205ENST00000535375 LINC00310P59036 64 aa7.87□□□□□ -1.15
PRKDC-205ENST00000535375 ZNF200P98182 395 aaPredicted RBP7.87□□□□□ -1.15
PRKDC-205ENST00000535375 IFRD2Q12894 506 aaPredicted RBP7.87□□□□□ -1.15
PRKDC-205ENST00000535375 RASGRF1Q13972 1273 aa7.87□□□□□ -1.15
PRKDC-205ENST00000535375 TARBP2Q15633 366 aaKnown RBP7.87□□□□□ -1.15
PRKDC-205ENST00000535375 ZNF385BQ569K4 471 aa7.87□□□□□ -1.15
PRKDC-205ENST00000535375 WWC2Q6AWC2 1192 aa7.87□□□□□ -1.15
PRKDC-205ENST00000535375 CCDC103Q8IW40 242 aa7.87□□□□□ -1.15
PRKDC-205ENST00000535375 TEX2Q8IWB9 1127 aa7.87□□□□□ -1.15
PRKDC-205ENST00000535375 LRRC56Q8IYG6 542 aaPredicted RBP7.87□□□□□ -1.15
PRKDC-205ENST00000535375 PMFBP1Q8TBY8 1022 aa7.87□□□□□ -1.15
PRKDC-205ENST00000535375 DPF3Q92784 378 aa7.87□□□□□ -1.15
PRKDC-205ENST00000535375 TRMT2BQ96GJ1 504 aaKnown RBP7.87□□□□□ -1.15
PRKDC-205ENST00000535375 SIGLEC10Q96LC7 697 aa7.87□□□□□ -1.15
PRKDC-205ENST00000535375 IPO9Q96P70 1041 aaKnown RBP7.87□□□□□ -1.15
PRKDC-205ENST00000535375 SPATA9Q9BWV2 254 aa7.87□□□□□ -1.15
PRKDC-205ENST00000535375 RXFP1Q9HBX9 757 aa7.87□□□□□ -1.15
PRKDC-205ENST00000535375 TMEFF2Q9UIK5 374 aaPredicted RBP7.87□□□□□ -1.15
PRKDC-205ENST00000535375 PCDHA2Q9Y5H9 948 aa7.87□□□□□ -1.15
PRKDC-205ENST00000535375 NUAK1O60285 661 aa7.86□□□□□ -1.15
PRKDC-205ENST00000535375 ZBTB7AO95365 584 aa7.86□□□□□ -1.15
PRKDC-205ENST00000535375 NTRK1P04629 796 aa7.86□□□□□ -1.15
PRKDC-205ENST00000535375 PFKLP17858 780 aa7.86□□□□□ -1.15
PRKDC-205ENST00000535375 EPHB3P54753 998 aa7.86□□□□□ -1.15
PRKDC-205ENST00000535375 SLC9A5Q14940 896 aa7.86□□□□□ -1.15
PRKDC-205ENST00000535375 SLC35F1Q5T1Q4 408 aa7.86□□□□□ -1.15
PRKDC-205ENST00000535375 NSMFQ6X4W1 530 aa7.86□□□□□ -1.15
PRKDC-205ENST00000535375 CEP68Q76N32 757 aa7.86□□□□□ -1.15
PRKDC-205ENST00000535375 TMEM169Q96HH4 297 aa7.86□□□□□ -1.15
PRKDC-205ENST00000535375 FBLN5Q9UBX5 448 aa7.86□□□□□ -1.15
PRKDC-205ENST00000535375 PFDN2Q9UHV9 154 aa7.86□□□□□ -1.15
PRKDC-205ENST00000535375 COA3Q9Y2R0 106 aaPredicted RBP7.86□□□□□ -1.15
PRKDC-205ENST00000535375 KCTD3Q9Y597 815 aa7.86□□□□□ -1.15
PRKDC-205ENST00000535375 HCFC2Q9Y5Z7 792 aa7.86□□□□□ -1.15
PRKDC-205ENST00000535375 DLX3O60479 287 aa7.85□□□□□ -1.15
PRKDC-205ENST00000535375 CAPNS1P04632 268 aa7.85□□□□□ -1.15
PRKDC-205ENST00000535375 FGFR1P11362 822 aa7.85□□□□□ -1.15
PRKDC-205ENST00000535375 PABPC1P11940 636 aaKnown RBP7.85□□□□□ -1.15
PRKDC-205ENST00000535375 CFPP27918 469 aa7.85□□□□□ -1.15
PRKDC-205ENST00000535375 BCL6P41182 706 aa7.85□□□□□ -1.15
PRKDC-205ENST00000535375 NCKAP1LP55160 1127 aa7.85□□□□□ -1.15
PRKDC-205ENST00000535375 SSRP1Q08945 709 aaKnown RBP7.85□□□□□ -1.15
PRKDC-205ENST00000535375 LSAMPQ13449 338 aa7.85□□□□□ -1.15
PRKDC-205ENST00000535375 USP53Q70EK8 1073 aa7.85□□□□□ -1.15
PRKDC-205ENST00000535375 SPATC1Q76KD6 591 aa7.85□□□□□ -1.15
PRKDC-205ENST00000535375 RCBTB1Q8NDN9 531 aa7.85□□□□□ -1.15
PRKDC-205ENST00000535375 PLEKHO2Q8TD55 490 aa7.85□□□□□ -1.15
PRKDC-205ENST00000535375 ALG3Q92685 438 aa7.85□□□□□ -1.15
PRKDC-205ENST00000535375 AP5M1Q9H0R1 490 aa7.85□□□□□ -1.15
PRKDC-205ENST00000535375 IRF2BPLQ9H1B7 796 aa7.85□□□□□ -1.15
PRKDC-205ENST00000535375 ARHGEF4Q9NR80 690 aa7.85□□□□□ -1.15
PRKDC-205ENST00000535375 TESK1Q15569 626 aa7.84□□□□□ -1.15
PRKDC-205ENST00000535375 DENND5AQ6IQ26 1287 aa7.84□□□□□ -1.15
PRKDC-205ENST00000535375 DCP2Q8IU60 420 aaKnown RBP7.84□□□□□ -1.15
PRKDC-205ENST00000535375 CDC6Q99741 560 aa7.84□□□□□ -1.15
PRKDC-205ENST00000535375 FAN1Q9Y2M0 1017 aa7.84□□□□□ -1.15
PRKDC-205ENST00000535375 ARNTLO00327 626 aa7.83□□□□□ -1.16
PRKDC-205ENST00000535375 BUB1BO60566 1050 aaPredicted RBP7.83□□□□□ -1.16
PRKDC-205ENST00000535375 LCP1P13796 627 aa7.83□□□□□ -1.16
PRKDC-205ENST00000535375 FPR2P25090 351 aa7.83□□□□□ -1.16
PRKDC-205ENST00000535375 SERINC3Q13530 473 aa7.83□□□□□ -1.16
PRKDC-205ENST00000535375 MROH9Q5TGP6 573 aa7.83□□□□□ -1.16
PRKDC-205ENST00000535375 DPH6Q7L8W6 267 aa7.83□□□□□ -1.16
PRKDC-205ENST00000535375 LRP10Q7Z4F1 713 aa7.83□□□□□ -1.16
PRKDC-205ENST00000535375 TSPAN17Q96FV3 270 aa7.83□□□□□ -1.16
PRKDC-205ENST00000535375 C1orf159Q96HA4 380 aa7.83□□□□□ -1.16
PRKDC-205ENST00000535375 DEPDC7Q96QD5 511 aa7.83□□□□□ -1.16
PRKDC-205ENST00000535375 SRPK1Q96SB4 655 aaKnown RBP7.83□□□□□ -1.16
PRKDC-205ENST00000535375 CLDND1Q9NY35 253 aa7.83□□□□□ -1.16
PRKDC-205ENST00000535375 PCDHA5Q9Y5H7 936 aa7.83□□□□□ -1.16
PRKDC-205ENST00000535375 NCAM1P13591 858 aa7.82□□□□□ -1.16
PRKDC-205ENST00000535375 PI3P19957 117 aa7.82□□□□□ -1.16
PRKDC-205ENST00000535375 SSPNQ14714 243 aa7.82□□□□□ -1.16
PRKDC-205ENST00000535375 IGDCC3Q8IVU1 814 aa7.82□□□□□ -1.16
PRKDC-205ENST00000535375 SCUBE1Q8IWY4 988 aa7.82□□□□□ -1.16
PRKDC-205ENST00000535375 DCAF4Q8WV16 495 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms