RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 CDK8P49336 464 aa12.89□□□□□ -0.35
VAMP1-204ENST00000535180 BRDTQ58F21 947 aaPredicted RBP12.89□□□□□ -0.35
VAMP1-204ENST00000535180 MCTP2Q6DN12 878 aa12.89□□□□□ -0.35
VAMP1-204ENST00000535180 SDR42E1Q8WUS8 393 aa12.89□□□□□ -0.35
VAMP1-204ENST00000535180 CTAGE1Q96RT6 745 aa12.89□□□□□ -0.35
VAMP1-204ENST00000535180 ATRXP46100 2492 aa12.89□□□□□ -0.35
VAMP1-204ENST00000535180 PKD1L2Q7Z442 2459 aa12.88□□□□□ -0.35
VAMP1-204ENST00000535180 F5H6K3 240 aa12.88□□□□□ -0.35
VAMP1-204ENST00000535180 KPNA6O60684 536 aa12.88□□□□□ -0.35
VAMP1-204ENST00000535180 KLRC3Q07444 240 aa12.88□□□□□ -0.35
VAMP1-204ENST00000535180 RBL2Q08999 1139 aa12.88□□□□□ -0.35
VAMP1-204ENST00000535180 MKRN4PQ13434 485 aaPredicted RBP12.88□□□□□ -0.35
VAMP1-204ENST00000535180 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.88□□□□□ -0.35
VAMP1-204ENST00000535180 FRMD5Q7Z6J6 570 aa12.88□□□□□ -0.35
VAMP1-204ENST00000535180 FBXO11Q86XK2 927 aa12.88□□□□□ -0.35
VAMP1-204ENST00000535180 MORC4Q8TE76 937 aa12.88□□□□□ -0.35
VAMP1-204ENST00000535180 KIFC2Q96AC6 838 aa12.88□□□□□ -0.35
VAMP1-204ENST00000535180 RIPOR3Q96MK2 946 aa12.88□□□□□ -0.35
VAMP1-204ENST00000535180 WDR11Q9BZH6 1224 aa12.88□□□□□ -0.35
VAMP1-204ENST00000535180 ANTXR1Q9H6X2 564 aa12.88□□□□□ -0.35
VAMP1-204ENST00000535180 AMHP03971 560 aa12.87□□□□□ -0.35
VAMP1-204ENST00000535180 GNAI3P08754 354 aa12.87□□□□□ -0.35
VAMP1-204ENST00000535180 ADAM15Q13444 863 aa12.87□□□□□ -0.35
VAMP1-204ENST00000535180 OR6J1Q8NGC5 347 aa12.87□□□□□ -0.35
VAMP1-204ENST00000535180 DHX38Q92620 1227 aaKnown RBP12.87□□□□□ -0.35
VAMP1-204ENST00000535180 MSLNLQ96KJ4 702 aa12.87□□□□□ -0.35
VAMP1-204ENST00000535180 RBM47A0AV96 593 aaKnown RBP12.86□□□□□ -0.35
VAMP1-204ENST00000535180 A6NJR5 290 aa12.86□□□□□ -0.35
VAMP1-204ENST00000535180 NDUFB10O96000 172 aa12.86□□□□□ -0.35
VAMP1-204ENST00000535180 PDGFBP01127 241 aaPredicted RBP12.86□□□□□ -0.35
VAMP1-204ENST00000535180 CKBP12277 381 aa12.86□□□□□ -0.35
VAMP1-204ENST00000535180 ICAM3P32942 547 aa12.86□□□□□ -0.35
VAMP1-204ENST00000535180 GTF2F1P35269 517 aaKnown RBP eCLIP12.86□□□□□ -0.35
VAMP1-204ENST00000535180 PUM1Q14671 1186 aaKnown RBP eCLIP12.86□□□□□ -0.35
VAMP1-204ENST00000535180 ALDH1L2Q3SY69 923 aa12.86□□□□□ -0.35
VAMP1-204ENST00000535180 C16orf86Q6ZW13 317 aa12.86□□□□□ -0.35
VAMP1-204ENST00000535180 MYOCDQ8IZQ8 938 aa12.86□□□□□ -0.35
VAMP1-204ENST00000535180 LMAN2LQ9H0V9 348 aa12.86□□□□□ -0.35
VAMP1-204ENST00000535180 RNF146Q9NTX7 359 aa12.86□□□□□ -0.35
VAMP1-204ENST00000535180 FEM1BQ9UK73 627 aa12.86□□□□□ -0.35
VAMP1-204ENST00000535180 RAD50Q92878 1312 aa12.86□□□□□ -0.35
VAMP1-204ENST00000535180 PNMA6EA0A0J9YXQ4 647 aa12.85□□□□□ -0.35
VAMP1-204ENST00000535180 LINC01565O15544 149 aa12.85□□□□□ -0.35
VAMP1-204ENST00000535180 FDX1P10109 184 aa12.85□□□□□ -0.35
VAMP1-204ENST00000535180 C12orf60Q5U649 245 aa12.85□□□□□ -0.35
VAMP1-204ENST00000535180 GDF6Q6KF10 455 aaPredicted RBP12.85□□□□□ -0.35
VAMP1-204ENST00000535180 SESTD1Q86VW0 696 aa12.85□□□□□ -0.35
VAMP1-204ENST00000535180 SMRP1Q8NCR6 262 aa12.85□□□□□ -0.35
VAMP1-204ENST00000535180 YME1L1Q96TA2 773 aa12.85□□□□□ -0.35
VAMP1-204ENST00000535180 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.85□□□□□ -0.35
VAMP1-204ENST00000535180 IGFLR1Q9H665 355 aa12.85□□□□□ -0.35
VAMP1-204ENST00000535180 NYAP2Q9P242 653 aa12.85□□□□□ -0.35
VAMP1-204ENST00000535180 DBNLQ9UJU6 430 aaKnown RBP12.85□□□□□ -0.35
VAMP1-204ENST00000535180 SPTBN2O15020 2390 aa12.85□□□□□ -0.35
VAMP1-204ENST00000535180 C5orf67F2Z3F1 127 aa12.84□□□□□ -0.35
VAMP1-204ENST00000535180 LGR5O75473 907 aa12.84□□□□□ -0.35
VAMP1-204ENST00000535180 RB1P06400 928 aa12.84□□□□□ -0.35
VAMP1-204ENST00000535180 NDUFV1P49821 464 aa12.84□□□□□ -0.35
VAMP1-204ENST00000535180 RRP1P56182 461 aaKnown RBP12.84□□□□□ -0.35
VAMP1-204ENST00000535180 COASYQ13057 564 aa12.84□□□□□ -0.35
VAMP1-204ENST00000535180 PTPN21Q16825 1174 aa12.84□□□□□ -0.35
VAMP1-204ENST00000535180 TKFCQ3LXA3 575 aa12.84□□□□□ -0.35
VAMP1-204ENST00000535180 LCORLQ8N3X6 602 aa12.84□□□□□ -0.35
VAMP1-204ENST00000535180 TMEM105Q8N8V8 129 aa12.84□□□□□ -0.35
VAMP1-204ENST00000535180 TOP1MTQ969P6 601 aa12.84□□□□□ -0.35
VAMP1-204ENST00000535180 TRERF1Q96PN7 1200 aa12.84□□□□□ -0.35
VAMP1-204ENST00000535180 PHF7Q9BWX1 381 aaPredicted RBP12.84□□□□□ -0.35
VAMP1-204ENST00000535180 CYP39A1Q9NYL5 469 aa12.84□□□□□ -0.35
VAMP1-204ENST00000535180 MYH7BA7E2Y1 1941 aa12.84□□□□□ -0.35
VAMP1-204ENST00000535180 FRYLO94915 3013 aa12.83□□□□□ -0.36
VAMP1-204ENST00000535180 CYP2D7A0A087X1C5 515 aa12.83□□□□□ -0.36
VAMP1-204ENST00000535180 NKRFO15226 690 aaKnown RBP eCLIP12.83□□□□□ -0.36
VAMP1-204ENST00000535180 GRM6O15303 877 aa12.83□□□□□ -0.36
VAMP1-204ENST00000535180 CHMP4BP1P59074 171 aa12.83□□□□□ -0.36
VAMP1-204ENST00000535180 MBTPS1Q14703 1052 aa12.83□□□□□ -0.36
VAMP1-204ENST00000535180 SLC9C2Q5TAH2 1124 aa12.83□□□□□ -0.36
VAMP1-204ENST00000535180 TRAF7Q6Q0C0 670 aa12.83□□□□□ -0.36
VAMP1-204ENST00000535180 RPGRIP1Q96KN7 1286 aa12.83□□□□□ -0.36
VAMP1-204ENST00000535180 API5Q9BZZ5 524 aaKnown RBP12.83□□□□□ -0.36
VAMP1-204ENST00000535180 ATP8A2Q9NTI2 1148 aa12.83□□□□□ -0.36
VAMP1-204ENST00000535180 SMC4Q9NTJ3 1288 aa12.83□□□□□ -0.36
VAMP1-204ENST00000535180 TLR7Q9NYK1 1049 aaKnown RBP12.83□□□□□ -0.36
VAMP1-204ENST00000535180 CLEC1BQ9P126 229 aa12.83□□□□□ -0.36
VAMP1-204ENST00000535180 PDE6AP16499 860 aa12.82□□□□□ -0.36
VAMP1-204ENST00000535180 ZNF618Q5T7W0 954 aa12.82□□□□□ -0.36
VAMP1-204ENST00000535180 AMOTL1Q8IY63 956 aa12.82□□□□□ -0.36
VAMP1-204ENST00000535180 DBF4BQ8NFT6 615 aa12.82□□□□□ -0.36
VAMP1-204ENST00000535180 PURBQ96QR8 312 aaKnown RBP12.82□□□□□ -0.36
VAMP1-204ENST00000535180 C11orf84Q9BUA3 381 aaPredicted RBP12.82□□□□□ -0.36
VAMP1-204ENST00000535180 INCENPQ9NQS7 918 aa12.82□□□□□ -0.36
VAMP1-204ENST00000535180 NOB1Q9ULX3 412 aaKnown RBP12.82□□□□□ -0.36
VAMP1-204ENST00000535180 USP15Q9Y4E8 981 aaPredicted RBP12.82□□□□□ -0.36
VAMP1-204ENST00000535180 USP24Q9UPU5 2620 aa12.82□□□□□ -0.36
VAMP1-204ENST00000535180 EMSYQ7Z589 1322 aa12.82□□□□□ -0.36
VAMP1-204ENST00000535180 KIAA1217Q5T5P2 1943 aa12.82□□□□□ -0.36
VAMP1-204ENST00000535180 KIAA1671Q9BY89 1806 aa12.81□□□□□ -0.36
VAMP1-204ENST00000535180 LOC102724159A0A0B4J2E5 919 aa12.81□□□□□ -0.36
VAMP1-204ENST00000535180 RBAK-RBAKDNI3L0D1 243 aa12.81□□□□□ -0.36
VAMP1-204ENST00000535180 PRKAB2O43741 272 aa12.81□□□□□ -0.36
VAMP1-204ENST00000535180 ALAS1P13196 640 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms