RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 ABCB11O95342 1321 aa15.05■□□□□ -0
BEST1-208ENST00000534553 CYP3A4P08684 503 aa15.04■□□□□ -0
BEST1-208ENST00000534553 RASSF7Q02833 373 aa15.04■□□□□ -0
BEST1-208ENST00000534553 TPD52L1Q16890 204 aaPredicted RBP15.04■□□□□ -0
BEST1-208ENST00000534553 USH1GQ495M9 461 aa15.04■□□□□ -0
BEST1-208ENST00000534553 HAUS3Q68CZ6 603 aa15.04■□□□□ -0
BEST1-208ENST00000534553 TMC6Q7Z403 805 aa15.04■□□□□ -0
BEST1-208ENST00000534553 VSTM4Q8IW00 320 aa15.04■□□□□ -0
BEST1-208ENST00000534553 GIMAP8Q8ND71 665 aaPredicted RBP15.04■□□□□ -0
BEST1-208ENST00000534553 SNX29Q8TEQ0 813 aa15.04■□□□□ -0
BEST1-208ENST00000534553 LARP4BQ92615 738 aaKnown RBP15.04■□□□□ -0
BEST1-208ENST00000534553 STAMQ92783 540 aa15.04■□□□□ -0
BEST1-208ENST00000534553 FAM20AQ96MK3 541 aa15.04■□□□□ -0
BEST1-208ENST00000534553 MMTAG2Q9BU76 263 aaKnown RBP15.04■□□□□ -0
BEST1-208ENST00000534553 PVALEFA0A1B0GWK0 134 aa15.03■□□□□ -0
BEST1-208ENST00000534553 PSMA7O14818 248 aa15.03■□□□□ -0
BEST1-208ENST00000534553 FDX1P10109 184 aa15.03■□□□□ -0
BEST1-208ENST00000534553 SFPQP23246 707 aaKnown RBP eCLIP15.03■□□□□ -0
BEST1-208ENST00000534553 CASP1P29466 404 aa15.03■□□□□ -0
BEST1-208ENST00000534553 KCNJ6P48051 423 aa15.03■□□□□ -0
BEST1-208ENST00000534553 USP14P54578 494 aa15.03■□□□□ -0
BEST1-208ENST00000534553 CDKAL1Q5VV42 579 aa15.03■□□□□ -0
BEST1-208ENST00000534553 CCDC112Q8NEF3 446 aa15.03■□□□□ -0
BEST1-208ENST00000534553 CACTINQ8WUQ7 758 aaKnown RBP15.03■□□□□ -0
BEST1-208ENST00000534553 HAS1Q92839 578 aa15.03■□□□□ -0
BEST1-208ENST00000534553 DEFB129Q9H1M3 183 aa15.03■□□□□ -0
BEST1-208ENST00000534553 HACL1Q9UJ83 578 aa15.03■□□□□ -0
BEST1-208ENST00000534553 GJA3Q9Y6H8 435 aa15.03■□□□□ -0
BEST1-208ENST00000534553 CD44P16070 742 aaKnown RBP15.03■□□□□ -0
BEST1-208ENST00000534553 KMT5BQ4FZB7 885 aa15.03■□□□□ -0
BEST1-208ENST00000534553 FILIP1LQ4L180 1135 aa15.03■□□□□ -0
BEST1-208ENST00000534553 TMEM119Q4V9L6 283 aa15.03■□□□□ -0
BEST1-208ENST00000534553 KLHL10Q6JEL2 608 aa15.03■□□□□ -0
BEST1-208ENST00000534553 CDAN1Q8IWY9 1227 aa15.03■□□□□ -0
BEST1-208ENST00000534553 TRMT44Q8IYL2 757 aaKnown RBP15.03■□□□□ -0
BEST1-208ENST00000534553 SAMD3Q8N6K7 520 aa15.03■□□□□ -0
BEST1-208ENST00000534553 ERMNQ8TAM6 284 aa15.03■□□□□ -0
BEST1-208ENST00000534553 NOC3LQ8WTT2 800 aaKnown RBP15.03■□□□□ -0
BEST1-208ENST00000534553 KIFC2Q96AC6 838 aa15.03■□□□□ -0
BEST1-208ENST00000534553 ZNF341Q9BYN7 854 aa15.03■□□□□ -0
BEST1-208ENST00000534553 EXOC1Q9NV70 894 aa15.03■□□□□ -0
BEST1-208ENST00000534553 BICDL2A1A5D9 508 aa15.02■□□□□ -0
BEST1-208ENST00000534553 PSDA5PKW4 1024 aaPredicted RBP15.02■□□□□ -0
BEST1-208ENST00000534553 GCOM1H8Y6P7 765 aaPredicted RBP15.02■□□□□ -0
BEST1-208ENST00000534553 KLRC4O43908 158 aa15.02■□□□□ -0
BEST1-208ENST00000534553 POLR2MP0CAP2 368 aa15.02■□□□□ -0
BEST1-208ENST00000534553 TERF1P54274 439 aa15.02■□□□□ -0
BEST1-208ENST00000534553 GRB10Q13322 594 aa15.02■□□□□ -0
BEST1-208ENST00000534553 ADSSL1Q8N142 457 aa15.02■□□□□ -0
BEST1-208ENST00000534553 GPC2Q8N158 579 aa15.02■□□□□ -0
BEST1-208ENST00000534553 PRPF38AQ8NAV1 312 aaKnown RBP15.02■□□□□ -0
BEST1-208ENST00000534553 DHTKD1Q96HY7 919 aaPredicted RBP15.02■□□□□ -0
BEST1-208ENST00000534553 AS3MTQ9HBK9 375 aa15.02■□□□□ -0
BEST1-208ENST00000534553 MAP3K20Q9NYL2 800 aaKnown RBP15.02■□□□□ -0
BEST1-208ENST00000534553 A0A1B0GTH6 734 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 SHTN1A0MZ66 631 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 POTEMA6NI47 508 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 LMNB1P20700 586 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 TBC1D10BQ4KMP7 808 aaPredicted RBP15.01□□□□□ -0.01
BEST1-208ENST00000534553 KIAA1755Q5JYT7 1200 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 SAMD7Q7Z3H4 446 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 NELFBQ8WX92 580 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 RAD54LQ92698 747 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 MED15Q96RN5 788 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 KCND1Q9NSA2 647 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 BMP2KQ9NSY1 1161 aaPredicted RBP15.01□□□□□ -0.01
BEST1-208ENST00000534553 PYCARDQ9ULZ3 195 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 CTNND2Q9UQB3 1225 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 MYH7BA7E2Y1 1941 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 OPLAHO14841 1288 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 ICAM1P05362 532 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 SKILP12757 684 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 ASIC1P78348 528 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 PSMD2Q13200 908 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 SPECC1LQ69YQ0 1117 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 UNC13DQ70J99 1090 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 ETNPPLQ8TBG4 499 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 PNMA5Q96PV4 448 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 SPON1Q9HCB6 807 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 SAMSN1Q9NSI8 373 aaKnown RBP15.01□□□□□ -0.01
BEST1-208ENST00000534553 ZNF112Q9UJU3 913 aa15.01□□□□□ -0.01
BEST1-208ENST00000534553 LRRC10BA6NIK2 292 aa15□□□□□ -0.01
BEST1-208ENST00000534553 EGFRP00533 1210 aa15□□□□□ -0.01
BEST1-208ENST00000534553 PRCPP42785 496 aa15□□□□□ -0.01
BEST1-208ENST00000534553 PDE4DQ08499 809 aa15□□□□□ -0.01
BEST1-208ENST00000534553 LRMPQ12912 555 aa15□□□□□ -0.01
BEST1-208ENST00000534553 FOXR2Q6PJQ5 311 aa15□□□□□ -0.01
BEST1-208ENST00000534553 MCF2L2Q86YR7 1114 aa15□□□□□ -0.01
BEST1-208ENST00000534553 SMYD4Q8IYR2 804 aaPredicted RBP15□□□□□ -0.01
BEST1-208ENST00000534553 PLIN2Q99541 437 aa15□□□□□ -0.01
BEST1-208ENST00000534553 SLF1Q9BQI6 1058 aa15□□□□□ -0.01
BEST1-208ENST00000534553 WDR18Q9BV38 432 aa15□□□□□ -0.01
BEST1-208ENST00000534553 BLOC1S4Q9NUP1 217 aa15□□□□□ -0.01
BEST1-208ENST00000534553 GPRC5DQ9NZD1 345 aa15□□□□□ -0.01
BEST1-208ENST00000534553 ATAD5Q96QE3 1844 aa15□□□□□ -0.01
BEST1-208ENST00000534553 EEF1GP26641 437 aaKnown RBP14.99□□□□□ -0.01
BEST1-208ENST00000534553 ZNF76P36508 570 aa14.99□□□□□ -0.01
BEST1-208ENST00000534553 SNAP25P60880 206 aa14.99□□□□□ -0.01
BEST1-208ENST00000534553 SETQ01105 290 aaPredicted RBP14.99□□□□□ -0.01
BEST1-208ENST00000534553 GHRHRQ02643 423 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms