RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 NLRP5P59047 1200 aa18.88■□□□□ 0.61
PACSIN3-210ENST00000533686 CACNB2Q08289 660 aaPredicted RBP18.88■□□□□ 0.61
PACSIN3-210ENST00000533686 TRIM32Q13049 653 aa18.88■□□□□ 0.61
PACSIN3-210ENST00000533686 ARHGEF16Q5VV41 709 aa18.88■□□□□ 0.61
PACSIN3-210ENST00000533686 MCTP2Q6DN12 878 aa18.88■□□□□ 0.61
PACSIN3-210ENST00000533686 ARMCX2Q7L311 632 aa18.88■□□□□ 0.61
PACSIN3-210ENST00000533686 FCHSD1Q86WN1 690 aa18.88■□□□□ 0.61
PACSIN3-210ENST00000533686 ZNF333Q96JL9 665 aa18.88■□□□□ 0.61
PACSIN3-210ENST00000533686 PXMP2Q9NR77 195 aa18.88■□□□□ 0.61
PACSIN3-210ENST00000533686 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.88■□□□□ 0.61
PACSIN3-210ENST00000533686 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.88■□□□□ 0.61
PACSIN3-210ENST00000533686 DTNBO60941 627 aa18.87■□□□□ 0.61
PACSIN3-210ENST00000533686 FOSP01100 380 aaPredicted RBP18.87■□□□□ 0.61
PACSIN3-210ENST00000533686 AP3B2Q13367 1082 aa18.87■□□□□ 0.61
PACSIN3-210ENST00000533686 FRMPD4Q14CM0 1322 aa18.87■□□□□ 0.61
PACSIN3-210ENST00000533686 UBE2SQ16763 222 aa18.87■□□□□ 0.61
PACSIN3-210ENST00000533686 DAGLBQ8NCG7 672 aa18.87■□□□□ 0.61
PACSIN3-210ENST00000533686 CNPY2Q9Y2B0 182 aa18.87■□□□□ 0.61
PACSIN3-210ENST00000533686 RBBP6Q7Z6E9 1792 aaKnown RBP18.86■□□□□ 0.61
PACSIN3-210ENST00000533686 RPTORQ8N122 1335 aa18.86■□□□□ 0.61
PACSIN3-210ENST00000533686 SPDYE3A6NKU9 549 aa18.86■□□□□ 0.61
PACSIN3-210ENST00000533686 CYBAP13498 195 aa18.86■□□□□ 0.61
PACSIN3-210ENST00000533686 PRKAR2AP13861 404 aaKnown RBP18.86■□□□□ 0.61
PACSIN3-210ENST00000533686 HSCBQ8IWL3 235 aa18.86■□□□□ 0.61
PACSIN3-210ENST00000533686 PDCD2LQ9BRP1 358 aa18.86■□□□□ 0.61
PACSIN3-210ENST00000533686 PHF20Q9BVI0 1012 aa18.86■□□□□ 0.61
PACSIN3-210ENST00000533686 ABHD16BQ9H3Z7 469 aa18.86■□□□□ 0.61
PACSIN3-210ENST00000533686 PCDHA6Q9UN73 950 aa18.86■□□□□ 0.61
PACSIN3-210ENST00000533686 PCDHA4Q9UN74 947 aa18.86■□□□□ 0.61
PACSIN3-210ENST00000533686 KIF3AQ9Y496 699 aa18.86■□□□□ 0.61
PACSIN3-210ENST00000533686 PCDHA8Q9Y5H6 950 aa18.86■□□□□ 0.61
PACSIN3-210ENST00000533686 HTTP42858 3142 aa18.86■□□□□ 0.61
PACSIN3-210ENST00000533686 PLXNA1Q9UIW2 1896 aa18.86■□□□□ 0.61
PACSIN3-210ENST00000533686 LCTP09848 1927 aa18.85■□□□□ 0.61
PACSIN3-210ENST00000533686 NR3C2P08235 984 aa18.85■□□□□ 0.61
PACSIN3-210ENST00000533686 EIF2AK2P19525 551 aaKnown RBP18.85■□□□□ 0.61
PACSIN3-210ENST00000533686 PDE4DQ08499 809 aa18.85■□□□□ 0.61
PACSIN3-210ENST00000533686 NPY5RQ15761 445 aa18.85■□□□□ 0.61
PACSIN3-210ENST00000533686 REXO1Q8N1G1 1221 aaKnown RBP18.85■□□□□ 0.61
PACSIN3-210ENST00000533686 FAM184AQ8NB25 1140 aa18.85■□□□□ 0.61
PACSIN3-210ENST00000533686 INTS4Q96HW7 963 aaKnown RBP18.85■□□□□ 0.61
PACSIN3-210ENST00000533686 KATNBL1Q9H079 304 aa18.85■□□□□ 0.61
PACSIN3-210ENST00000533686 EHMT1Q9H9B1 1298 aa18.85■□□□□ 0.61
PACSIN3-210ENST00000533686 HMX1Q9NP08 348 aaPredicted RBP18.85■□□□□ 0.61
PACSIN3-210ENST00000533686 ZNF865P0CJ78 1059 aaPredicted RBP18.84■□□□□ 0.61
PACSIN3-210ENST00000533686 ACVR2BQ13705 512 aa18.84■□□□□ 0.61
PACSIN3-210ENST00000533686 TRIM29Q14134 588 aa18.84■□□□□ 0.61
PACSIN3-210ENST00000533686 PGM5Q15124 567 aa18.84■□□□□ 0.61
PACSIN3-210ENST00000533686 STXBP2Q15833 593 aa18.84■□□□□ 0.61
PACSIN3-210ENST00000533686 XRRA1Q6P2D8 792 aa18.84■□□□□ 0.61
PACSIN3-210ENST00000533686 VSIG10LQ86VR7 867 aa18.84■□□□□ 0.61
PACSIN3-210ENST00000533686 TNS4Q8IZW8 715 aa18.84■□□□□ 0.61
PACSIN3-210ENST00000533686 BLIDQ8IZY5 108 aa18.84■□□□□ 0.61
PACSIN3-210ENST00000533686 TRPV1Q8NER1 839 aa18.84■□□□□ 0.61
PACSIN3-210ENST00000533686 VTA1Q9NP79 307 aa18.84■□□□□ 0.61
PACSIN3-210ENST00000533686 KCNJ14Q9UNX9 436 aa18.84■□□□□ 0.61
PACSIN3-210ENST00000533686 SMC3Q9UQE7 1217 aa18.84■□□□□ 0.61
PACSIN3-210ENST00000533686 EIF3JO75822 258 aaKnown RBP18.83■□□□□ 0.6
PACSIN3-210ENST00000533686 CCL5P13501 91 aa18.83■□□□□ 0.6
PACSIN3-210ENST00000533686 CCND2P30279 289 aa18.83■□□□□ 0.6
PACSIN3-210ENST00000533686 MTFR1Q15390 333 aa18.83■□□□□ 0.6
PACSIN3-210ENST00000533686 PRAMEF19Q5SWL8 479 aa18.83■□□□□ 0.6
PACSIN3-210ENST00000533686 JAKMIP3Q5VZ66 844 aa18.83■□□□□ 0.6
PACSIN3-210ENST00000533686 ABHD8Q96I13 439 aa18.83■□□□□ 0.6
PACSIN3-210ENST00000533686 C8orf76Q96K31 380 aa18.83■□□□□ 0.6
PACSIN3-210ENST00000533686 ANO3Q9BYT9 981 aa18.83■□□□□ 0.6
PACSIN3-210ENST00000533686 UNC93B1Q9H1C4 597 aa18.83■□□□□ 0.6
PACSIN3-210ENST00000533686 M0R2N6 131 aa18.82■□□□□ 0.6
PACSIN3-210ENST00000533686 ADAMTS3O15072 1205 aa18.82■□□□□ 0.6
PACSIN3-210ENST00000533686 SEPT4O43236 478 aa18.82■□□□□ 0.6
PACSIN3-210ENST00000533686 STAM2O75886 525 aa18.82■□□□□ 0.6
PACSIN3-210ENST00000533686 GJB2P29033 226 aa18.82■□□□□ 0.6
PACSIN3-210ENST00000533686 CCND3P30281 292 aaPredicted RBP18.82■□□□□ 0.6
PACSIN3-210ENST00000533686 PCNX4Q63HM2 1172 aa18.82■□□□□ 0.6
PACSIN3-210ENST00000533686 KRT40Q6A162 431 aa18.82■□□□□ 0.6
PACSIN3-210ENST00000533686 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.82■□□□□ 0.6
PACSIN3-210ENST00000533686 RNF208Q9H0X6 261 aa18.82■□□□□ 0.6
PACSIN3-210ENST00000533686 PAK6Q9NQU5 681 aaPredicted RBP18.82■□□□□ 0.6
PACSIN3-210ENST00000533686 GJB4Q9NTQ9 266 aa18.82■□□□□ 0.6
PACSIN3-210ENST00000533686 TMEM260Q9NX78 707 aa18.82■□□□□ 0.6
PACSIN3-210ENST00000533686 ZHX1Q9UKY1 873 aaPredicted RBP18.82■□□□□ 0.6
PACSIN3-210ENST00000533686 DDX49Q9Y6V7 483 aaKnown RBP18.82■□□□□ 0.6
PACSIN3-210ENST00000533686 RBM47A0AV96 593 aaKnown RBP18.81■□□□□ 0.6
PACSIN3-210ENST00000533686 MSCO60682 206 aa18.81■□□□□ 0.6
PACSIN3-210ENST00000533686 MMP1P03956 469 aa18.81■□□□□ 0.6
PACSIN3-210ENST00000533686 SREBF1P36956 1147 aa18.81■□□□□ 0.6
PACSIN3-210ENST00000533686 TAPT1Q6NXT6 567 aa18.81■□□□□ 0.6
PACSIN3-210ENST00000533686 FBXO18Q8NFZ0 1043 aa18.81■□□□□ 0.6
PACSIN3-210ENST00000533686 IL31RAQ8NI17 732 aa18.81■□□□□ 0.6
PACSIN3-210ENST00000533686 BRMS1Q9HCU9 246 aa18.81■□□□□ 0.6
PACSIN3-210ENST00000533686 FAM184BQ9ULE4 1060 aa18.81■□□□□ 0.6
PACSIN3-210ENST00000533686 MYCLP12524 364 aaPredicted RBP18.8■□□□□ 0.6
PACSIN3-210ENST00000533686 AKR1A1P14550 325 aa18.8■□□□□ 0.6
PACSIN3-210ENST00000533686 CAPN2P17655 700 aa18.8■□□□□ 0.6
PACSIN3-210ENST00000533686 KRT2P35908 639 aa18.8■□□□□ 0.6
PACSIN3-210ENST00000533686 IQSEC1Q6DN90 963 aa18.8■□□□□ 0.6
PACSIN3-210ENST00000533686 EEPD1Q7L9B9 569 aa18.8■□□□□ 0.6
PACSIN3-210ENST00000533686 FBXO16Q8IX29 292 aaPredicted RBP18.8■□□□□ 0.6
PACSIN3-210ENST00000533686 RASGRP4Q8TDF6 673 aa18.8■□□□□ 0.6
PACSIN3-210ENST00000533686 DDX20Q9UHI6 824 aaKnown RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms