RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 ALDH8A1Q9H2A2 487 aaPredicted RBP10.21□□□□□ -0.77
COPB1-210ENST00000533533 RNF41Q9H4P4 317 aaPredicted RBP10.21□□□□□ -0.77
COPB1-210ENST00000533533 ANAPC4Q9UJX5 808 aa10.21□□□□□ -0.77
COPB1-210ENST00000533533 CCPG1Q9ULG6 757 aa10.21□□□□□ -0.77
COPB1-210ENST00000533533 MTMR7Q9Y216 660 aa10.21□□□□□ -0.77
COPB1-210ENST00000533533 SLC4A7Q9Y6M7 1214 aa10.21□□□□□ -0.77
COPB1-210ENST00000533533 ZMYM6O95789 1325 aa10.2□□□□□ -0.78
COPB1-210ENST00000533533 SUPT20HL2P0C7V6 817 aa10.2□□□□□ -0.78
COPB1-210ENST00000533533 MYOGP15173 224 aa10.2□□□□□ -0.78
COPB1-210ENST00000533533 COL9A1P20849 921 aa10.2□□□□□ -0.78
COPB1-210ENST00000533533 NOVP48745 357 aa10.2□□□□□ -0.78
COPB1-210ENST00000533533 PTH1RQ03431 593 aa10.2□□□□□ -0.78
COPB1-210ENST00000533533 CCDC96Q2M329 555 aa10.2□□□□□ -0.78
COPB1-210ENST00000533533 PPP2R2DQ66LE6 453 aa10.2□□□□□ -0.78
COPB1-210ENST00000533533 TBC1D10CQ8IV04 446 aa10.2□□□□□ -0.78
COPB1-210ENST00000533533 SCLYQ96I15 445 aa10.2□□□□□ -0.78
COPB1-210ENST00000533533 ESYT1Q9BSJ8 1104 aa10.2□□□□□ -0.78
COPB1-210ENST00000533533 WDR11Q9BZH6 1224 aa10.2□□□□□ -0.78
COPB1-210ENST00000533533 RANBP17Q9H2T7 1088 aaKnown RBP10.2□□□□□ -0.78
COPB1-210ENST00000533533 ANO2Q9NQ90 1003 aa10.2□□□□□ -0.78
COPB1-210ENST00000533533 TRMT13Q9NUP7 481 aaKnown RBP10.2□□□□□ -0.78
COPB1-210ENST00000533533 ADD3Q9UEY8 706 aaKnown RBP10.2□□□□□ -0.78
COPB1-210ENST00000533533 PCDHA11Q9Y5I1 949 aa10.2□□□□□ -0.78
COPB1-210ENST00000533533 TNKSO95271 1327 aa10.19□□□□□ -0.78
COPB1-210ENST00000533533 LOC102724159A0A0B4J2E5 919 aa10.19□□□□□ -0.78
COPB1-210ENST00000533533 ZBBXA8MT70 800 aa10.19□□□□□ -0.78
COPB1-210ENST00000533533 ORC4O43929 436 aa10.19□□□□□ -0.78
COPB1-210ENST00000533533 PFKMP08237 780 aa10.19□□□□□ -0.78
COPB1-210ENST00000533533 CYP2C9P11712 490 aa10.19□□□□□ -0.78
COPB1-210ENST00000533533 ATP2A2P16615 1042 aaKnown RBP10.19□□□□□ -0.78
COPB1-210ENST00000533533 ALDH5A1P51649 535 aaPredicted RBP10.19□□□□□ -0.78
COPB1-210ENST00000533533 PURAQ00577 322 aaKnown RBP10.19□□□□□ -0.78
COPB1-210ENST00000533533 BAATQ14032 418 aaPredicted RBP10.19□□□□□ -0.78
COPB1-210ENST00000533533 TTLL4Q14679 1199 aa10.19□□□□□ -0.78
COPB1-210ENST00000533533 PWP2Q15269 919 aaKnown RBP10.19□□□□□ -0.78
COPB1-210ENST00000533533 TTBK2Q6IQ55 1244 aa10.19□□□□□ -0.78
COPB1-210ENST00000533533 BTNL9Q6UXG8 535 aa10.19□□□□□ -0.78
COPB1-210ENST00000533533 IL27Q8NEV9 243 aa10.19□□□□□ -0.78
COPB1-210ENST00000533533 DCAF4Q8WV16 495 aa10.19□□□□□ -0.78
COPB1-210ENST00000533533 ESR2Q92731 530 aa10.19□□□□□ -0.78
COPB1-210ENST00000533533 UHRF1Q96T88 793 aaPredicted RBP10.19□□□□□ -0.78
COPB1-210ENST00000533533 TSPYL2Q9H2G4 693 aaPredicted RBP10.19□□□□□ -0.78
COPB1-210ENST00000533533 POLR3EQ9NVU0 708 aa10.19□□□□□ -0.78
COPB1-210ENST00000533533 MUC6Q6W4X9 2439 aa10.18□□□□□ -0.78
COPB1-210ENST00000533533 NEDD4P46934 1319 aa10.18□□□□□ -0.78
COPB1-210ENST00000533533 MYH6P13533 1939 aa10.18□□□□□ -0.78
COPB1-210ENST00000533533 RBM47A0AV96 593 aaKnown RBP10.18□□□□□ -0.78
COPB1-210ENST00000533533 PTPDC1A2A3K4 754 aa10.18□□□□□ -0.78
COPB1-210ENST00000533533 B4E1Z4 1266 aa10.18□□□□□ -0.78
COPB1-210ENST00000533533 NFIBO00712 420 aa10.18□□□□□ -0.78
COPB1-210ENST00000533533 MYL3P08590 195 aa10.18□□□□□ -0.78
COPB1-210ENST00000533533 FGRP09769 529 aa10.18□□□□□ -0.78
COPB1-210ENST00000533533 SLC16A2P36021 539 aa10.18□□□□□ -0.78
COPB1-210ENST00000533533 CPT1AP50416 773 aa10.18□□□□□ -0.78
COPB1-210ENST00000533533 TRDNQ13061 729 aa10.18□□□□□ -0.78
COPB1-210ENST00000533533 TMEM67Q5HYA8 995 aa10.18□□□□□ -0.78
COPB1-210ENST00000533533 SYDE2Q5VT97 1194 aa10.18□□□□□ -0.78
COPB1-210ENST00000533533 DEFB128Q7Z7B8 93 aa10.18□□□□□ -0.78
COPB1-210ENST00000533533 ZKSCAN3Q9BRR0 538 aa10.18□□□□□ -0.78
COPB1-210ENST00000533533 MTG1Q9BT17 334 aaPredicted RBP10.18□□□□□ -0.78
COPB1-210ENST00000533533 GPHNQ9NQX3 736 aaPredicted RBP10.18□□□□□ -0.78
COPB1-210ENST00000533533 RBM8AQ9Y5S9 174 aaKnown RBP10.18□□□□□ -0.78
COPB1-210ENST00000533533 TANC1Q9C0D5 1861 aa10.18□□□□□ -0.78
COPB1-210ENST00000533533 MYO7AQ13402 2215 aa10.17□□□□□ -0.78
COPB1-210ENST00000533533 KDM4AO75164 1064 aa10.17□□□□□ -0.78
COPB1-210ENST00000533533 TOP1P11387 765 aaKnown RBP10.17□□□□□ -0.78
COPB1-210ENST00000533533 PCP11498 1178 aaKnown RBP10.17□□□□□ -0.78
COPB1-210ENST00000533533 NBPF20Q3BBV1 942 aa10.17□□□□□ -0.78
COPB1-210ENST00000533533 BRDTQ58F21 947 aaPredicted RBP10.17□□□□□ -0.78
COPB1-210ENST00000533533 RALYLQ86SE5 291 aaKnown RBP10.17□□□□□ -0.78
COPB1-210ENST00000533533 MICALL1Q8N3F8 863 aa10.17□□□□□ -0.78
COPB1-210ENST00000533533 OR6J1Q8NGC5 347 aa10.17□□□□□ -0.78
COPB1-210ENST00000533533 CLEC4DQ8WXI8 215 aa10.17□□□□□ -0.78
COPB1-210ENST00000533533 TMEM47Q9BQJ4 181 aa10.17□□□□□ -0.78
COPB1-210ENST00000533533 KRT23Q9C075 422 aa10.17□□□□□ -0.78
COPB1-210ENST00000533533 CNNM2Q9H8M5 875 aa10.17□□□□□ -0.78
COPB1-210ENST00000533533 GPCPD1Q9NPB8 672 aa10.17□□□□□ -0.78
COPB1-210ENST00000533533 PNMA2Q9UL42 364 aa10.17□□□□□ -0.78
COPB1-210ENST00000533533 MYH7BA7E2Y1 1941 aa10.17□□□□□ -0.78
COPB1-210ENST00000533533 KIAA1217Q5T5P2 1943 aa10.17□□□□□ -0.78
COPB1-210ENST00000533533 FRMPD2Q68DX3 1309 aaPredicted RBP10.16□□□□□ -0.78
COPB1-210ENST00000533533 PTPRSQ13332 1948 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 A6NJR5 290 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 NKRFO15226 690 aaKnown RBP eCLIP10.16□□□□□ -0.78
COPB1-210ENST00000533533 KPNA6O60684 536 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 CA3P07451 260 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 CYP21A2P08686 494 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 ACTN1P12814 892 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 BMP1P13497 986 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 POU3F3P20264 500 aaPredicted RBP10.16□□□□□ -0.78
COPB1-210ENST00000533533 CALML3P27482 149 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 RFC2P35250 354 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 TFF2Q03403 129 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 PDE4DQ08499 809 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 PPP2R5BQ15173 497 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 AAK1Q2M2I8 961 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 FAM47CQ5HY64 1035 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 NFRKBQ6P4R8 1299 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 SLC30A10Q6XR72 485 aa10.16□□□□□ -0.78
COPB1-210ENST00000533533 RNF207Q6ZRF8 634 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms