RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 CALM3P0DP25 149 aa25.85■■□□□ 1.73
BEST1-207ENST00000533521 IRX5P78411 483 aaPredicted RBP25.85■■□□□ 1.73
BEST1-207ENST00000533521 CTCFLQ8NI51 663 aaPredicted RBP25.85■■□□□ 1.73
BEST1-207ENST00000533521 TRIM43Q96BQ3 446 aaPredicted RBP25.85■■□□□ 1.73
BEST1-207ENST00000533521 RMDN3Q96TC7 470 aa25.85■■□□□ 1.73
BEST1-207ENST00000533521 NEFLP07196 543 aa25.84■■□□□ 1.73
BEST1-207ENST00000533521 FAAP100Q0VG06 881 aa25.84■■□□□ 1.73
BEST1-207ENST00000533521 SGMS1Q86VZ5 419 aa25.84■■□□□ 1.73
BEST1-207ENST00000533521 TAAR1Q96RJ0 339 aa25.84■■□□□ 1.73
BEST1-207ENST00000533521 PRDM5Q9NQX1 630 aaPredicted RBP25.84■■□□□ 1.73
BEST1-207ENST00000533521 COL20A1Q9P218 1284 aa25.84■■□□□ 1.73
BEST1-207ENST00000533521 PQBP1O60828 265 aaKnown RBP25.83■■□□□ 1.73
BEST1-207ENST00000533521 CPT1AP50416 773 aa25.83■■□□□ 1.73
BEST1-207ENST00000533521 BEX3Q00994 111 aa25.83■■□□□ 1.73
BEST1-207ENST00000533521 PPP2R5BQ15173 497 aa25.83■■□□□ 1.73
BEST1-207ENST00000533521 STXBP2Q15833 593 aa25.83■■□□□ 1.73
BEST1-207ENST00000533521 ERICH6BQ5W0A0 696 aa25.83■■□□□ 1.73
BEST1-207ENST00000533521 SH3RF1Q7Z6J0 888 aa25.83■■□□□ 1.73
BEST1-207ENST00000533521 PIGSQ96S52 555 aa25.83■■□□□ 1.73
BEST1-207ENST00000533521 POLR3EQ9NVU0 708 aa25.83■■□□□ 1.73
BEST1-207ENST00000533521 CCDC69A6NI79 296 aa25.82■■□□□ 1.72
BEST1-207ENST00000533521 KPNA6O60684 536 aa25.82■■□□□ 1.72
BEST1-207ENST00000533521 EIF3JO75822 258 aaKnown RBP25.82■■□□□ 1.72
BEST1-207ENST00000533521 KRT32Q14532 448 aa25.82■■□□□ 1.72
BEST1-207ENST00000533521 TTLL4Q14679 1199 aa25.82■■□□□ 1.72
BEST1-207ENST00000533521 BRDTQ58F21 947 aaPredicted RBP25.82■■□□□ 1.72
BEST1-207ENST00000533521 CCDC62Q6P9F0 684 aa25.82■■□□□ 1.72
BEST1-207ENST00000533521 VTI1AQ96AJ9 217 aa25.82■■□□□ 1.72
BEST1-207ENST00000533521 TMEM39AQ9NV64 488 aa25.82■■□□□ 1.72
BEST1-207ENST00000533521 TBX21Q9UL17 535 aa25.82■■□□□ 1.72
BEST1-207ENST00000533521 CFBP00751 764 aa25.81■■□□□ 1.72
BEST1-207ENST00000533521 CXCL17Q6UXB2 119 aa25.81■■□□□ 1.72
BEST1-207ENST00000533521 FAM126BQ8IXS8 530 aa25.81■■□□□ 1.72
BEST1-207ENST00000533521 NEK1Q96PY6 1258 aa25.81■■□□□ 1.72
BEST1-207ENST00000533521 PXMP2Q9NR77 195 aa25.81■■□□□ 1.72
BEST1-207ENST00000533521 A6NJR5 290 aa25.8■■□□□ 1.72
BEST1-207ENST00000533521 TLR3O15455 904 aaKnown RBP25.8■■□□□ 1.72
BEST1-207ENST00000533521 RAG1P15918 1043 aa25.8■■□□□ 1.72
BEST1-207ENST00000533521 TMEM63BQ5T3F8 832 aa25.8■■□□□ 1.72
BEST1-207ENST00000533521 ARHGEF16Q5VV41 709 aa25.8■■□□□ 1.72
BEST1-207ENST00000533521 NFXL1Q6ZNB6 911 aa25.8■■□□□ 1.72
BEST1-207ENST00000533521 HOMER1Q86YM7 354 aa25.8■■□□□ 1.72
BEST1-207ENST00000533521 BADQ92934 168 aa25.8■■□□□ 1.72
BEST1-207ENST00000533521 KCNB2Q92953 911 aa25.8■■□□□ 1.72
BEST1-207ENST00000533521 GPHNQ9NQX3 736 aaPredicted RBP25.8■■□□□ 1.72
BEST1-207ENST00000533521 CD4P01730 458 aa25.79■■□□□ 1.72
BEST1-207ENST00000533521 NR3C2P08235 984 aa25.79■■□□□ 1.72
BEST1-207ENST00000533521 HMGB1P09429 215 aaKnown RBP25.79■■□□□ 1.72
BEST1-207ENST00000533521 TXNP10599 105 aaKnown RBP25.79■■□□□ 1.72
BEST1-207ENST00000533521 EXOSC10Q01780 885 aaKnown RBP25.79■■□□□ 1.72
BEST1-207ENST00000533521 ITGA7Q13683 1181 aa25.79■■□□□ 1.72
BEST1-207ENST00000533521 DHX32Q7L7V1 743 aaKnown RBP25.79■■□□□ 1.72
BEST1-207ENST00000533521 OR6J1Q8NGC5 347 aa25.79■■□□□ 1.72
BEST1-207ENST00000533521 RRP36Q96EU6 259 aaKnown RBP25.79■■□□□ 1.72
BEST1-207ENST00000533521 SLC12A7Q9Y666 1083 aa25.79■■□□□ 1.72
BEST1-207ENST00000533521 GCOM1H8Y6P7 765 aaPredicted RBP25.78■■□□□ 1.72
BEST1-207ENST00000533521 EPB41L2O43491 1005 aaKnown RBP25.78■■□□□ 1.72
BEST1-207ENST00000533521 TIMP1P01033 207 aa25.78■■□□□ 1.72
BEST1-207ENST00000533521 POLR2MP0CAP2 368 aa25.78■■□□□ 1.72
BEST1-207ENST00000533521 SCN10AQ9Y5Y9 1956 aa25.78■■□□□ 1.72
BEST1-207ENST00000533521 SOX1O00570 391 aaPredicted RBP25.77■■□□□ 1.72
BEST1-207ENST00000533521 PURAQ00577 322 aaKnown RBP25.77■■□□□ 1.72
BEST1-207ENST00000533521 KCNV1Q6PIU1 500 aa25.77■■□□□ 1.72
BEST1-207ENST00000533521 PDCD2LQ9BRP1 358 aa25.77■■□□□ 1.72
BEST1-207ENST00000533521 GRIN2DO15399 1336 aa25.77■■□□□ 1.72
BEST1-207ENST00000533521 LAMA3Q16787 3333 aa25.77■■□□□ 1.72
BEST1-207ENST00000533521 ITGB8P26012 769 aa25.76■■□□□ 1.71
BEST1-207ENST00000533521 COL9A3Q14050 684 aaPredicted RBP25.76■■□□□ 1.71
BEST1-207ENST00000533521 VSIG10LQ86VR7 867 aa25.76■■□□□ 1.71
BEST1-207ENST00000533521 TEX2Q8IWB9 1127 aa25.76■■□□□ 1.71
BEST1-207ENST00000533521 FANCBQ8NB91 859 aa25.76■■□□□ 1.71
BEST1-207ENST00000533521 EMID1Q96A84 441 aaPredicted RBP25.76■■□□□ 1.71
BEST1-207ENST00000533521 MTG1Q9BT17 334 aaPredicted RBP25.76■■□□□ 1.71
BEST1-207ENST00000533521 SEC63Q9UGP8 760 aaKnown RBP25.76■■□□□ 1.71
BEST1-207ENST00000533521 FRMPD4Q14CM0 1322 aa25.75■■□□□ 1.71
BEST1-207ENST00000533521 PIK3CDO00329 1044 aa25.75■■□□□ 1.71
BEST1-207ENST00000533521 TGFB3P10600 412 aa25.75■■□□□ 1.71
BEST1-207ENST00000533521 EIF2AK2P19525 551 aaKnown RBP25.75■■□□□ 1.71
BEST1-207ENST00000533521 PTGS1P23219 599 aa25.75■■□□□ 1.71
BEST1-207ENST00000533521 RCAN1P53805 252 aa25.75■■□□□ 1.71
BEST1-207ENST00000533521 MFSD5Q6N075 450 aa25.75■■□□□ 1.71
BEST1-207ENST00000533521 SYNE3Q6ZMZ3 975 aa25.75■■□□□ 1.71
BEST1-207ENST00000533521 RASEFQ8IZ41 740 aa25.75■■□□□ 1.71
BEST1-207ENST00000533521 SRBD1Q8N5C6 995 aaKnown RBP25.75■■□□□ 1.71
BEST1-207ENST00000533521 MYL10Q9BUA6 226 aa25.75■■□□□ 1.71
BEST1-207ENST00000533521 SZT2Q5T011 3432 aa25.74■■□□□ 1.71
BEST1-207ENST00000533521 STAM2O75886 525 aa25.74■■□□□ 1.71
BEST1-207ENST00000533521 REC8O95072 547 aa25.74■■□□□ 1.71
BEST1-207ENST00000533521 ARIH2O95376 493 aa25.74■■□□□ 1.71
BEST1-207ENST00000533521 GH1P01241 217 aa25.74■■□□□ 1.71
BEST1-207ENST00000533521 FPGSQ05932 587 aa25.74■■□□□ 1.71
BEST1-207ENST00000533521 DDX41Q9UJV9 622 aaKnown RBP25.74■■□□□ 1.71
BEST1-207ENST00000533521 HSPA4P34932 840 aa25.73■■□□□ 1.71
BEST1-207ENST00000533521 PTPN11Q06124 597 aaPredicted RBP25.73■■□□□ 1.71
BEST1-207ENST00000533521 PGM5Q15124 567 aa25.73■■□□□ 1.71
BEST1-207ENST00000533521 APOA5Q6Q788 366 aa25.73■■□□□ 1.71
BEST1-207ENST00000533521 SEPT14Q6ZU15 432 aa25.73■■□□□ 1.71
BEST1-207ENST00000533521 LRCH3Q96II8 777 aa25.73■■□□□ 1.71
BEST1-207ENST00000533521 RBM28Q9NW13 759 aaKnown RBP25.73■■□□□ 1.71
BEST1-207ENST00000533521 SUPT20HL2P0C7V6 817 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms