RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 RBM47A0AV96 593 aaKnown RBP10.63□□□□□ -0.71
USF1-210ENST00000531842 LINC01553A4QN01 128 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 H3BQ06 376 aaPredicted RBP10.63□□□□□ -0.71
USF1-210ENST00000531842 SORBS3O60504 671 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 NBNO60934 754 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 HMMRO75330 724 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 PFKMP08237 780 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 SUPT20HL2P0C7V6 817 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 ZNF200P98182 395 aaPredicted RBP10.63□□□□□ -0.71
USF1-210ENST00000531842 PTGISQ16647 500 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 TKFCQ3LXA3 575 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 GIMAP6Q6P9H5 292 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 CHST3Q7LGC8 479 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 FAM178BQ8IXR5 827 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 RETREG2Q8NC44 543 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 CLEC4DQ8WXI8 215 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 TBC1D5Q92609 795 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 PHOX2BQ99453 314 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 C17orf80Q9BSJ5 609 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 ZBED2Q9BTP6 218 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 OSBPL7Q9BZF2 842 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 LRRCC1Q9C099 1032 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 CPVLQ9H3G5 476 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 GPHNQ9NQX3 736 aaPredicted RBP10.63□□□□□ -0.71
USF1-210ENST00000531842 ECHDC1Q9NTX5 307 aa10.63□□□□□ -0.71
USF1-210ENST00000531842 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.63□□□□□ -0.71
USF1-210ENST00000531842 USP34Q70CQ2 3546 aa10.62□□□□□ -0.71
USF1-210ENST00000531842 PATL2C9JE40 543 aaKnown RBP10.62□□□□□ -0.71
USF1-210ENST00000531842 ICAM1P05362 532 aa10.62□□□□□ -0.71
USF1-210ENST00000531842 SSTR3P32745 418 aaPredicted RBP10.62□□□□□ -0.71
USF1-210ENST00000531842 KCNJ6P48051 423 aa10.62□□□□□ -0.71
USF1-210ENST00000531842 MRE11P49959 708 aa10.62□□□□□ -0.71
USF1-210ENST00000531842 CPT1AP50416 773 aa10.62□□□□□ -0.71
USF1-210ENST00000531842 HIC1Q14526 733 aa10.62□□□□□ -0.71
USF1-210ENST00000531842 MBTPS1Q14703 1052 aa10.62□□□□□ -0.71
USF1-210ENST00000531842 VPS53Q5VIR6 699 aa10.62□□□□□ -0.71
USF1-210ENST00000531842 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.62□□□□□ -0.71
USF1-210ENST00000531842 GJD3Q8N144 294 aa10.62□□□□□ -0.71
USF1-210ENST00000531842 PHOSPHO2Q8TCD6 241 aa10.62□□□□□ -0.71
USF1-210ENST00000531842 KAT2BQ92831 832 aa10.62□□□□□ -0.71
USF1-210ENST00000531842 RANBP17Q9H2T7 1088 aaKnown RBP10.62□□□□□ -0.71
USF1-210ENST00000531842 NOD1Q9Y239 953 aa10.62□□□□□ -0.71
USF1-210ENST00000531842 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.61□□□□□ -0.71
USF1-210ENST00000531842 A6NJR5 290 aa10.61□□□□□ -0.71
USF1-210ENST00000531842 TSPY2A6NKD2 308 aa10.61□□□□□ -0.71
USF1-210ENST00000531842 KIF28PB7ZC32 967 aa10.61□□□□□ -0.71
USF1-210ENST00000531842 PITPNM1O00562 1244 aa10.61□□□□□ -0.71
USF1-210ENST00000531842 RANBP6O60518 1105 aaKnown RBP10.61□□□□□ -0.71
USF1-210ENST00000531842 TXNP10599 105 aaKnown RBP10.61□□□□□ -0.71
USF1-210ENST00000531842 MS4A1P11836 297 aa10.61□□□□□ -0.71
USF1-210ENST00000531842 RFC2P35250 354 aa10.61□□□□□ -0.71
USF1-210ENST00000531842 PDE4BQ07343 736 aa10.61□□□□□ -0.71
USF1-210ENST00000531842 PDE4DQ08499 809 aa10.61□□□□□ -0.71
USF1-210ENST00000531842 PPP2R5BQ15173 497 aa10.61□□□□□ -0.71
USF1-210ENST00000531842 LY6KQ17RY6 165 aa10.61□□□□□ -0.71
USF1-210ENST00000531842 SYDE2Q5VT97 1194 aa10.61□□□□□ -0.71
USF1-210ENST00000531842 PTCRAQ6ISU1 281 aaPredicted RBP10.61□□□□□ -0.71
USF1-210ENST00000531842 NFRKBQ6P4R8 1299 aa10.61□□□□□ -0.71
USF1-210ENST00000531842 AFG1LQ8WV93 481 aa10.61□□□□□ -0.71
USF1-210ENST00000531842 ALG1Q9BT22 464 aa10.61□□□□□ -0.71
USF1-210ENST00000531842 NAPBQ9H115 298 aa10.61□□□□□ -0.71
USF1-210ENST00000531842 TECTAO75443 2155 aa10.6□□□□□ -0.71
USF1-210ENST00000531842 PLA2G6O60733 806 aa10.6□□□□□ -0.71
USF1-210ENST00000531842 CSPG5O95196 566 aa10.6□□□□□ -0.71
USF1-210ENST00000531842 FDX1P10109 184 aa10.6□□□□□ -0.71
USF1-210ENST00000531842 RPS6P62753 249 aaKnown RBP10.6□□□□□ -0.71
USF1-210ENST00000531842 USH1GQ495M9 461 aa10.6□□□□□ -0.71
USF1-210ENST00000531842 RNF207Q6ZRF8 634 aa10.6□□□□□ -0.71
USF1-210ENST00000531842 EP400NLQ6ZTU2 488 aa10.6□□□□□ -0.71
USF1-210ENST00000531842 LRRC8DQ7L1W4 858 aa10.6□□□□□ -0.71
USF1-210ENST00000531842 FBXL18Q96ME1 805 aa10.6□□□□□ -0.71
USF1-210ENST00000531842 SEZ6LQ9BYH1 1024 aa10.6□□□□□ -0.71
USF1-210ENST00000531842 COL20A1Q9P218 1284 aa10.6□□□□□ -0.71
USF1-210ENST00000531842 DDX19BQ9UMR2 479 aa10.6□□□□□ -0.71
USF1-210ENST00000531842 ARIH1Q9Y4X5 557 aaPredicted RBP10.6□□□□□ -0.71
USF1-210ENST00000531842 PRR33A8MZF0 331 aa10.59□□□□□ -0.71
USF1-210ENST00000531842 GJB5O95377 273 aa10.59□□□□□ -0.71
USF1-210ENST00000531842 MMP3P08254 477 aa10.59□□□□□ -0.71
USF1-210ENST00000531842 ZNF286BP0CG31 522 aa10.59□□□□□ -0.71
USF1-210ENST00000531842 GOLGA8HP0CJ92 632 aa10.59□□□□□ -0.71
USF1-210ENST00000531842 CKBP12277 381 aa10.59□□□□□ -0.71
USF1-210ENST00000531842 SELPP16109 830 aa10.59□□□□□ -0.71
USF1-210ENST00000531842 EDNRBP24530 442 aa10.59□□□□□ -0.71
USF1-210ENST00000531842 ERVK-21P61565 698 aa10.59□□□□□ -0.71
USF1-210ENST00000531842 NHLH1Q02575 133 aa10.59□□□□□ -0.71
USF1-210ENST00000531842 ARHGAP1Q07960 439 aa10.59□□□□□ -0.71
USF1-210ENST00000531842 BFSP2Q13515 415 aa10.59□□□□□ -0.71
USF1-210ENST00000531842 CLUL1Q15846 466 aa10.59□□□□□ -0.71
USF1-210ENST00000531842 LEXMQ3ZCV2 418 aa10.59□□□□□ -0.71
USF1-210ENST00000531842 RRP12Q5JTH9 1297 aaKnown RBP10.59□□□□□ -0.71
USF1-210ENST00000531842 ZNF618Q5T7W0 954 aa10.59□□□□□ -0.71
USF1-210ENST00000531842 TRAF7Q6Q0C0 670 aa10.59□□□□□ -0.71
USF1-210ENST00000531842 SEPT14Q6ZU15 432 aa10.59□□□□□ -0.71
USF1-210ENST00000531842 ZFP91Q96JP5 570 aaPredicted RBP10.59□□□□□ -0.71
USF1-210ENST00000531842 TGS1Q96RS0 853 aaKnown RBP10.59□□□□□ -0.71
USF1-210ENST00000531842 TMEM47Q9BQJ4 181 aa10.59□□□□□ -0.71
USF1-210ENST00000531842 ZNF287Q9HBT7 754 aa10.59□□□□□ -0.71
USF1-210ENST00000531842 HDAC6Q9UBN7 1215 aa10.59□□□□□ -0.71
USF1-210ENST00000531842 ADD3Q9UEY8 706 aaKnown RBP10.59□□□□□ -0.71
USF1-210ENST00000531842 SYNPO2Q9UMS6 1093 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms