RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 EIF3CQ99613 913 aaKnown RBP18.8■□□□□ 0.6
VPS26B-206ENST00000531741 NOC4LQ9BVI4 516 aaKnown RBP18.8■□□□□ 0.6
VPS26B-206ENST00000531741 SEMA6BQ9H3T3 888 aa18.8■□□□□ 0.6
VPS26B-206ENST00000531741 MYMKA6NI61 221 aa18.8■□□□□ 0.6
VPS26B-206ENST00000531741 POLRMTO00411 1230 aaKnown RBP18.8■□□□□ 0.6
VPS26B-206ENST00000531741 SLC37A4O43826 429 aa18.8■□□□□ 0.6
VPS26B-206ENST00000531741 FGFR1OPO95684 399 aaKnown RBP18.8■□□□□ 0.6
VPS26B-206ENST00000531741 HNRNPH3P31942 346 aaKnown RBP18.8■□□□□ 0.6
VPS26B-206ENST00000531741 CLK2P49760 499 aaKnown RBP18.8■□□□□ 0.6
VPS26B-206ENST00000531741 GTF2IP78347 998 aa18.8■□□□□ 0.6
VPS26B-206ENST00000531741 DDR1Q08345 913 aa18.8■□□□□ 0.6
VPS26B-206ENST00000531741 TMEM119Q4V9L6 283 aa18.8■□□□□ 0.6
VPS26B-206ENST00000531741 FKBP15Q5T1M5 1219 aa18.8■□□□□ 0.6
VPS26B-206ENST00000531741 ZSWIM4Q9H7M6 989 aa18.8■□□□□ 0.6
VPS26B-206ENST00000531741 AGPAT5Q9NUQ2 364 aa18.8■□□□□ 0.6
VPS26B-206ENST00000531741 UBAP1LF5GYI3 381 aa18.79■□□□□ 0.6
VPS26B-206ENST00000531741 KRT86O43790 486 aa18.79■□□□□ 0.6
VPS26B-206ENST00000531741 EHHADHQ08426 723 aa18.79■□□□□ 0.6
VPS26B-206ENST00000531741 PSMD2Q13200 908 aa18.79■□□□□ 0.6
VPS26B-206ENST00000531741 COA7Q96BR5 231 aa18.79■□□□□ 0.6
VPS26B-206ENST00000531741 SERPINB13Q9UIV8 391 aa18.79■□□□□ 0.6
VPS26B-206ENST00000531741 GUCA1BQ9UMX6 200 aa18.79■□□□□ 0.6
VPS26B-206ENST00000531741 PPEF1O14829 653 aaPredicted RBP18.78■□□□□ 0.6
VPS26B-206ENST00000531741 ERLIN1O75477 346 aa18.78■□□□□ 0.6
VPS26B-206ENST00000531741 LRRC63Q05C16 580 aa18.78■□□□□ 0.6
VPS26B-206ENST00000531741 BEND6Q5SZJ8 279 aaPredicted RBP18.78■□□□□ 0.6
VPS26B-206ENST00000531741 GPATCH4Q5T3I0 446 aaKnown RBP18.78■□□□□ 0.6
VPS26B-206ENST00000531741 PAPD7Q5XG87 772 aaKnown RBP18.78■□□□□ 0.6
VPS26B-206ENST00000531741 DPP8Q6V1X1 898 aaPredicted RBP18.78■□□□□ 0.6
VPS26B-206ENST00000531741 LRRC47Q8N1G4 583 aaKnown RBP18.78■□□□□ 0.6
VPS26B-206ENST00000531741 RAD54LQ92698 747 aa18.78■□□□□ 0.6
VPS26B-206ENST00000531741 MTMR8Q96EF0 704 aa18.78■□□□□ 0.6
VPS26B-206ENST00000531741 CDK5RAP3Q96JB5 506 aa18.78■□□□□ 0.6
VPS26B-206ENST00000531741 JMJD4Q9H9V9 463 aa18.78■□□□□ 0.6
VPS26B-206ENST00000531741 ATP6V0A2Q9Y487 856 aa18.78■□□□□ 0.6
VPS26B-206ENST00000531741 TDP2O95551 362 aa18.78■□□□□ 0.6
VPS26B-206ENST00000531741 GCFC2P16383 781 aaKnown RBP18.78■□□□□ 0.6
VPS26B-206ENST00000531741 MCM6Q14566 821 aa18.78■□□□□ 0.6
VPS26B-206ENST00000531741 SMC1AQ14683 1233 aaKnown RBP18.78■□□□□ 0.6
VPS26B-206ENST00000531741 SEPT2Q15019 361 aa18.78■□□□□ 0.6
VPS26B-206ENST00000531741 CCDC122Q5T0U0 273 aa18.78■□□□□ 0.6
VPS26B-206ENST00000531741 KRT79Q5XKE5 535 aa18.78■□□□□ 0.6
VPS26B-206ENST00000531741 PURBQ96QR8 312 aaKnown RBP18.78■□□□□ 0.6
VPS26B-206ENST00000531741 NHEJ1Q9H9Q4 299 aaPredicted RBP18.78■□□□□ 0.6
VPS26B-206ENST00000531741 IPO7O95373 1038 aaKnown RBP18.77■□□□□ 0.6
VPS26B-206ENST00000531741 PICALMQ13492 652 aa18.77■□□□□ 0.6
VPS26B-206ENST00000531741 PNKPQ96T60 521 aa18.77■□□□□ 0.6
VPS26B-206ENST00000531741 NAP1L4Q99733 375 aaKnown RBP18.77■□□□□ 0.6
VPS26B-206ENST00000531741 GBP3Q9H0R5 595 aa18.77■□□□□ 0.6
VPS26B-206ENST00000531741 SLC39A2Q9NP94 309 aa18.77■□□□□ 0.6
VPS26B-206ENST00000531741 DDX4Q9NQI0 724 aaKnown RBP18.77■□□□□ 0.6
VPS26B-206ENST00000531741 SLC26A4O43511 780 aa18.77■□□□□ 0.59
VPS26B-206ENST00000531741 SHMT1P34896 483 aa18.77■□□□□ 0.59
VPS26B-206ENST00000531741 VWA3BQ502W6 1294 aa18.77■□□□□ 0.59
VPS26B-206ENST00000531741 ADGRF4Q8IZF3 695 aa18.77■□□□□ 0.59
VPS26B-206ENST00000531741 TRIM10Q9UDY6 481 aa18.77■□□□□ 0.59
VPS26B-206ENST00000531741 PLAGL2Q9UPG8 496 aa18.77■□□□□ 0.59
VPS26B-206ENST00000531741 ANO9A1A5B4 782 aa18.76■□□□□ 0.59
VPS26B-206ENST00000531741 MRPL12P52815 198 aaKnown RBP18.76■□□□□ 0.59
VPS26B-206ENST00000531741 MAN2A1Q16706 1144 aa18.76■□□□□ 0.59
VPS26B-206ENST00000531741 HYIQ5T013 277 aa18.76■□□□□ 0.59
VPS26B-206ENST00000531741 WDR93Q6P2C0 686 aa18.76■□□□□ 0.59
VPS26B-206ENST00000531741 HHIPL2Q6UWX4 724 aa18.76■□□□□ 0.59
VPS26B-206ENST00000531741 KIAA1328Q86T90 577 aa18.76■□□□□ 0.59
VPS26B-206ENST00000531741 CCDC84Q86UT8 332 aaPredicted RBP18.76■□□□□ 0.59
VPS26B-206ENST00000531741 CERS5Q8N5B7 392 aa18.76■□□□□ 0.59
VPS26B-206ENST00000531741 SNX29Q8TEQ0 813 aa18.76■□□□□ 0.59
VPS26B-206ENST00000531741 CUL5Q93034 780 aa18.76■□□□□ 0.59
VPS26B-206ENST00000531741 JAKMIP2Q96AA8 810 aa18.76■□□□□ 0.59
VPS26B-206ENST00000531741 RPGRIP1Q96KN7 1286 aa18.76■□□□□ 0.59
VPS26B-206ENST00000531741 TSGA10Q9BZW7 698 aa18.76■□□□□ 0.59
VPS26B-206ENST00000531741 GLT8D2Q9H1C3 349 aa18.76■□□□□ 0.59
VPS26B-206ENST00000531741 GPCPD1Q9NPB8 672 aa18.76■□□□□ 0.59
VPS26B-206ENST00000531741 SIK3Q9Y2K2 1263 aa18.76■□□□□ 0.59
VPS26B-206ENST00000531741 HMGB2P26583 209 aaKnown RBP18.75■□□□□ 0.59
VPS26B-206ENST00000531741 CYP2C19P33261 490 aa18.75■□□□□ 0.59
VPS26B-206ENST00000531741 KLK7P49862 253 aa18.75■□□□□ 0.59
VPS26B-206ENST00000531741 ARHGAP27Q6ZUM4 889 aa18.75■□□□□ 0.59
VPS26B-206ENST00000531741 HDXQ7Z353 690 aa18.75■□□□□ 0.59
VPS26B-206ENST00000531741 SEPT12Q8IYM1 358 aa18.75■□□□□ 0.59
VPS26B-206ENST00000531741 PROM2Q8N271 834 aa18.75■□□□□ 0.59
VPS26B-206ENST00000531741 EHD4Q9H223 541 aa18.75■□□□□ 0.59
VPS26B-206ENST00000531741 NDST4Q9H3R1 872 aa18.75■□□□□ 0.59
VPS26B-206ENST00000531741 ANKRD31Q8N7Z5 1873 aa18.75■□□□□ 0.59
VPS26B-206ENST00000531741 POTEMA6NI47 508 aa18.75■□□□□ 0.59
VPS26B-206ENST00000531741 ZBTB5O15062 677 aa18.75■□□□□ 0.59
VPS26B-206ENST00000531741 PPP1R11O60927 126 aaPredicted RBP18.75■□□□□ 0.59
VPS26B-206ENST00000531741 OAS2P29728 719 aaKnown RBP18.75■□□□□ 0.59
VPS26B-206ENST00000531741 HPS3Q969F9 1004 aa18.75■□□□□ 0.59
VPS26B-206ENST00000531741 L1RE1Q9UN81 338 aa18.75■□□□□ 0.59
VPS26B-206ENST00000531741 SAR1BQ9Y6B6 198 aa18.75■□□□□ 0.59
VPS26B-206ENST00000531741 MYH4Q9Y623 1939 aa18.74■□□□□ 0.59
VPS26B-206ENST00000531741 TNNI2P48788 182 aa18.74■□□□□ 0.59
VPS26B-206ENST00000531741 VAV2P52735 878 aa18.74■□□□□ 0.59
VPS26B-206ENST00000531741 LRRC55Q6ZSA7 311 aa18.74■□□□□ 0.59
VPS26B-206ENST00000531741 DDX12PQ92771 950 aa18.74■□□□□ 0.59
VPS26B-206ENST00000531741 EEF2KMTQ96G04 330 aa18.74■□□□□ 0.59
VPS26B-206ENST00000531741 CCDC17Q96LX7 622 aa18.74■□□□□ 0.59
VPS26B-206ENST00000531741 PCMTD1Q96MG8 357 aaPredicted RBP18.74■□□□□ 0.59
VPS26B-206ENST00000531741 EDEM3Q9BZQ6 932 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms