RNA–Protein interactions for RNA: ENST00000531607.5

CHEK1-212, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 462 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-212ENST00000531607 SLC30A10Q6XR72 485 aa12.48□□□□□ -0.41
CHEK1-212ENST00000531607 HERC6Q8IVU3 1022 aa12.48□□□□□ -0.41
CHEK1-212ENST00000531607 RETREG2Q8NC44 543 aa12.48□□□□□ -0.41
CHEK1-212ENST00000531607 LRFN3Q9BTN0 628 aa12.48□□□□□ -0.41
CHEK1-212ENST00000531607 FSD1Q9BTV5 496 aa12.48□□□□□ -0.41
CHEK1-212ENST00000531607 RANBP17Q9H2T7 1088 aaKnown RBP12.48□□□□□ -0.41
CHEK1-212ENST00000531607 EPHX3Q9H6B9 360 aa12.48□□□□□ -0.41
CHEK1-212ENST00000531607 KAT6AQ92794 2004 aa12.47□□□□□ -0.41
CHEK1-212ENST00000531607 ARHGEF15O94989 841 aa12.47□□□□□ -0.41
CHEK1-212ENST00000531607 IQCF3P0C7M6 154 aa12.47□□□□□ -0.41
CHEK1-212ENST00000531607 CALML3P27482 149 aa12.47□□□□□ -0.41
CHEK1-212ENST00000531607 SLC16A2P36021 539 aa12.47□□□□□ -0.41
CHEK1-212ENST00000531607 KCNJ6P48051 423 aa12.47□□□□□ -0.41
CHEK1-212ENST00000531607 CHMP4BP1P59074 171 aa12.47□□□□□ -0.41
CHEK1-212ENST00000531607 CTDSPL2Q05D32 466 aa12.47□□□□□ -0.41
CHEK1-212ENST00000531607 BFSP2Q13515 415 aa12.47□□□□□ -0.41
CHEK1-212ENST00000531607 NBPF20Q3BBV1 942 aa12.47□□□□□ -0.41
CHEK1-212ENST00000531607 TMEM31Q5JXX7 168 aa12.47□□□□□ -0.41
CHEK1-212ENST00000531607 PHOSPHO2Q8TCD6 241 aa12.47□□□□□ -0.41
CHEK1-212ENST00000531607 DCAF4Q8WV16 495 aa12.47□□□□□ -0.41
CHEK1-212ENST00000531607 HLA-CQ95604 372 aa12.47□□□□□ -0.41
CHEK1-212ENST00000531607 MPHOSPH6Q99547 160 aaKnown RBP12.47□□□□□ -0.41
CHEK1-212ENST00000531607 IL17RBQ9NRM6 502 aa12.47□□□□□ -0.41
CHEK1-212ENST00000531607 FRMPD2Q68DX3 1309 aaPredicted RBP12.46□□□□□ -0.41
CHEK1-212ENST00000531607 LOC102724159A0A0B4J2E5 919 aa12.46□□□□□ -0.41
CHEK1-212ENST00000531607 TLL1O43897 1013 aa12.46□□□□□ -0.41
CHEK1-212ENST00000531607 RANBP6O60518 1105 aaKnown RBP12.46□□□□□ -0.41
CHEK1-212ENST00000531607 BAIAP3O94812 1187 aa12.46□□□□□ -0.41
CHEK1-212ENST00000531607 PDE4DQ08499 809 aa12.46□□□□□ -0.41
CHEK1-212ENST00000531607 GRB10Q13322 594 aa12.46□□□□□ -0.41
CHEK1-212ENST00000531607 PWP2Q15269 919 aaKnown RBP12.46□□□□□ -0.41
CHEK1-212ENST00000531607 SYDE2Q5VT97 1194 aa12.46□□□□□ -0.41
CHEK1-212ENST00000531607 NFRKBQ6P4R8 1299 aa12.46□□□□□ -0.41
CHEK1-212ENST00000531607 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.46□□□□□ -0.41
CHEK1-212ENST00000531607 RBM47A0AV96 593 aaKnown RBP12.45□□□□□ -0.42
CHEK1-212ENST00000531607 NKRFO15226 690 aaKnown RBP eCLIP12.45□□□□□ -0.42
CHEK1-212ENST00000531607 KPNA6O60684 536 aa12.45□□□□□ -0.42
CHEK1-212ENST00000531607 TTBK2Q6IQ55 1244 aa12.45□□□□□ -0.42
CHEK1-212ENST00000531607 RNF207Q6ZRF8 634 aa12.45□□□□□ -0.42
CHEK1-212ENST00000531607 SPRED2Q7Z698 418 aa12.45□□□□□ -0.42
CHEK1-212ENST00000531607 CCDC155Q8N6L0 562 aa12.45□□□□□ -0.42
CHEK1-212ENST00000531607 GDPD5Q8WTR4 605 aa12.45□□□□□ -0.42
CHEK1-212ENST00000531607 SCFD2Q8WU76 684 aa12.45□□□□□ -0.42
CHEK1-212ENST00000531607 INCENPQ9NQS7 918 aa12.45□□□□□ -0.42
CHEK1-212ENST00000531607 ARIH1Q9Y4X5 557 aaPredicted RBP12.45□□□□□ -0.42
CHEK1-212ENST00000531607 KIAA1671Q9BY89 1806 aa12.44□□□□□ -0.42
CHEK1-212ENST00000531607 TTC41PQ6P2S7 1318 aa12.44□□□□□ -0.42
CHEK1-212ENST00000531607 LCHNA4D1U4 455 aa12.44□□□□□ -0.42
CHEK1-212ENST00000531607 FAM86C2PA6NEL3 165 aa12.44□□□□□ -0.42
CHEK1-212ENST00000531607 PTPN11Q06124 597 aaPredicted RBP12.44□□□□□ -0.42
CHEK1-212ENST00000531607 PTGISQ16647 500 aa12.44□□□□□ -0.42
CHEK1-212ENST00000531607 ZMYM1Q5SVZ6 1142 aa12.44□□□□□ -0.42
CHEK1-212ENST00000531607 TMCO2Q7Z6W1 182 aaPredicted RBP12.44□□□□□ -0.42
CHEK1-212ENST00000531607 COPS5Q92905 334 aa12.44□□□□□ -0.42
CHEK1-212ENST00000531607 ZBED2Q9BTP6 218 aa12.44□□□□□ -0.42
CHEK1-212ENST00000531607 GPCPD1Q9NPB8 672 aa12.44□□□□□ -0.42
CHEK1-212ENST00000531607 TOMM22Q9NS69 142 aa12.44□□□□□ -0.42
CHEK1-212ENST00000531607 MTUS1Q9ULD2 1270 aa12.44□□□□□ -0.42
CHEK1-212ENST00000531607 LOXHD1Q8IVV2 1947 aa12.43□□□□□ -0.42
CHEK1-212ENST00000531607 PIEZO1Q92508 2521 aa12.43□□□□□ -0.42
CHEK1-212ENST00000531607 A6NJR5 290 aa12.43□□□□□ -0.42
CHEK1-212ENST00000531607 LPXNO60711 386 aa12.43□□□□□ -0.42
CHEK1-212ENST00000531607 TXNP10599 105 aaKnown RBP12.43□□□□□ -0.42
CHEK1-212ENST00000531607 WDR5P61964 334 aaKnown RBP12.43□□□□□ -0.42
CHEK1-212ENST00000531607 RPS6P62753 249 aaKnown RBP12.43□□□□□ -0.42
CHEK1-212ENST00000531607 RRP12Q5JTH9 1297 aaKnown RBP12.43□□□□□ -0.42
CHEK1-212ENST00000531607 C20orf194Q5TEA3 1177 aa12.43□□□□□ -0.42
CHEK1-212ENST00000531607 BTNL9Q6UXG8 535 aa12.43□□□□□ -0.42
CHEK1-212ENST00000531607 CAGE1Q8TC20 777 aa12.43□□□□□ -0.42
CHEK1-212ENST00000531607 AFAP1L1Q8TED9 768 aa12.43□□□□□ -0.42
CHEK1-212ENST00000531607 CLEC4DQ8WXI8 215 aa12.43□□□□□ -0.42
CHEK1-212ENST00000531607 KHSRPQ92945 711 aaKnown RBP eCLIP12.43□□□□□ -0.42
CHEK1-212ENST00000531607 DCTPP1Q9H773 170 aa12.43□□□□□ -0.42
CHEK1-212ENST00000531607 RCAN3Q9UKA8 241 aa12.43□□□□□ -0.42
CHEK1-212ENST00000531607 B4DLN1 442 aa12.42□□□□□ -0.42
CHEK1-212ENST00000531607 FOXP2O15409 715 aa12.42□□□□□ -0.42
CHEK1-212ENST00000531607 TOP1P11387 765 aaKnown RBP12.42□□□□□ -0.42
CHEK1-212ENST00000531607 EDNRBP24530 442 aa12.42□□□□□ -0.42
CHEK1-212ENST00000531607 MRPL12P52815 198 aaKnown RBP12.42□□□□□ -0.42
CHEK1-212ENST00000531607 DEFB103AP81534 67 aa12.42□□□□□ -0.42
CHEK1-212ENST00000531607 LRRC8DQ7L1W4 858 aa12.42□□□□□ -0.42
CHEK1-212ENST00000531607 DNERQ8NFT8 737 aa12.42□□□□□ -0.42
CHEK1-212ENST00000531607 PI4K2BQ8TCG2 481 aa12.42□□□□□ -0.42
CHEK1-212ENST00000531607 C11orf16Q9NQ32 467 aa12.42□□□□□ -0.42
CHEK1-212ENST00000531607 PNMA2Q9UL42 364 aa12.42□□□□□ -0.42
CHEK1-212ENST00000531607 WDR19Q8NEZ3 1342 aa12.41□□□□□ -0.42
CHEK1-212ENST00000531607 ORC4O43929 436 aa12.41□□□□□ -0.42
CHEK1-212ENST00000531607 ARIH2O95376 493 aa12.41□□□□□ -0.42
CHEK1-212ENST00000531607 MMP3P08254 477 aa12.41□□□□□ -0.42
CHEK1-212ENST00000531607 PDHBP11177 359 aa12.41□□□□□ -0.42
CHEK1-212ENST00000531607 SELPP16109 830 aa12.41□□□□□ -0.42
CHEK1-212ENST00000531607 NOVP48745 357 aa12.41□□□□□ -0.42
CHEK1-212ENST00000531607 USH1GQ495M9 461 aa12.41□□□□□ -0.42
CHEK1-212ENST00000531607 VPS53Q5VIR6 699 aa12.41□□□□□ -0.42
CHEK1-212ENST00000531607 GDF6Q6KF10 455 aaPredicted RBP12.41□□□□□ -0.42
CHEK1-212ENST00000531607 CNKSR3Q6P9H4 555 aa12.41□□□□□ -0.42
CHEK1-212ENST00000531607 CRBNQ96SW2 442 aa12.41□□□□□ -0.42
CHEK1-212ENST00000531607 TMEM47Q9BQJ4 181 aa12.41□□□□□ -0.42
CHEK1-212ENST00000531607 ANAPC4Q9UJX5 808 aa12.41□□□□□ -0.42
CHEK1-212ENST00000531607 GPR37L1O60883 481 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms