RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 FAM173BQ6P4H8 233 aa20.15■□□□□ 0.82
CTSB-222ENST00000531551 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.15■□□□□ 0.82
CTSB-222ENST00000531551 TEX2Q8IWB9 1127 aa20.15■□□□□ 0.82
CTSB-222ENST00000531551 MAF1Q9H063 256 aa20.15■□□□□ 0.82
CTSB-222ENST00000531551 COBLO75128 1261 aa20.14■□□□□ 0.81
CTSB-222ENST00000531551 BRAPQ7Z569 592 aa20.14■□□□□ 0.81
CTSB-222ENST00000531551 NUDT12Q9BQG2 462 aa20.14■□□□□ 0.81
CTSB-222ENST00000531551 FAM133AQ8N9E0 248 aa20.13■□□□□ 0.81
CTSB-222ENST00000531551 NSUN6Q8TEA1 469 aaKnown RBP20.13■□□□□ 0.81
CTSB-222ENST00000531551 PXMP2Q9NR77 195 aa20.13■□□□□ 0.81
CTSB-222ENST00000531551 ADD3Q9UEY8 706 aaKnown RBP20.13■□□□□ 0.81
CTSB-222ENST00000531551 DNAJC25-GNG10A0A024R161 153 aa20.13■□□□□ 0.81
CTSB-222ENST00000531551 SOWAHBA6NEL2 793 aa20.13■□□□□ 0.81
CTSB-222ENST00000531551 MYCLP12524 364 aaPredicted RBP20.13■□□□□ 0.81
CTSB-222ENST00000531551 CYP2B6P20813 491 aa20.13■□□□□ 0.81
CTSB-222ENST00000531551 MORN1Q5T089 497 aa20.13■□□□□ 0.81
CTSB-222ENST00000531551 ERO1AQ96HE7 468 aa20.13■□□□□ 0.81
CTSB-222ENST00000531551 ZFP91Q96JP5 570 aaPredicted RBP20.13■□□□□ 0.81
CTSB-222ENST00000531551 NOL7Q9UMY1 257 aaKnown RBP20.13■□□□□ 0.81
CTSB-222ENST00000531551 DDX49Q9Y6V7 483 aaKnown RBP20.13■□□□□ 0.81
CTSB-222ENST00000531551 ARHGAP4P98171 946 aa20.12■□□□□ 0.81
CTSB-222ENST00000531551 CAP1Q01518 475 aa20.12■□□□□ 0.81
CTSB-222ENST00000531551 MAP2K5Q13163 448 aa20.12■□□□□ 0.81
CTSB-222ENST00000531551 LETM2Q2VYF4 491 aa20.12■□□□□ 0.81
CTSB-222ENST00000531551 DNERQ8NFT8 737 aa20.12■□□□□ 0.81
CTSB-222ENST00000531551 SOCS4Q8WXH5 440 aa20.12■□□□□ 0.81
CTSB-222ENST00000531551 SLC5A4Q9NY91 659 aa20.12■□□□□ 0.81
CTSB-222ENST00000531551 ALDH5A1P51649 535 aaPredicted RBP20.11■□□□□ 0.81
CTSB-222ENST00000531551 ZNF792Q3KQV3 632 aa20.11■□□□□ 0.81
CTSB-222ENST00000531551 MYSM1Q5VVJ2 828 aa20.11■□□□□ 0.81
CTSB-222ENST00000531551 NEK8Q86SG6 692 aa20.11■□□□□ 0.81
CTSB-222ENST00000531551 JMYQ8N9B5 988 aa20.11■□□□□ 0.81
CTSB-222ENST00000531551 PDCD2LQ9BRP1 358 aa20.11■□□□□ 0.81
CTSB-222ENST00000531551 ZNF76P36508 570 aa20.11■□□□□ 0.81
CTSB-222ENST00000531551 SREBF1P36956 1147 aa20.11■□□□□ 0.81
CTSB-222ENST00000531551 RGS2P41220 211 aa20.11■□□□□ 0.81
CTSB-222ENST00000531551 NBR1Q14596 966 aa20.11■□□□□ 0.81
CTSB-222ENST00000531551 PGM5Q15124 567 aa20.11■□□□□ 0.81
CTSB-222ENST00000531551 IL31RAQ8NI17 732 aa20.11■□□□□ 0.81
CTSB-222ENST00000531551 GJD2Q9UKL4 321 aa20.11■□□□□ 0.81
CTSB-222ENST00000531551 GABRQQ9UN88 632 aa20.11■□□□□ 0.81
CTSB-222ENST00000531551 ASTN1O14525 1302 aa20.1■□□□□ 0.81
CTSB-222ENST00000531551 PRKCZQ05513 592 aa20.1■□□□□ 0.81
CTSB-222ENST00000531551 NPLOC4Q8TAT6 608 aa20.1■□□□□ 0.81
CTSB-222ENST00000531551 RPTORQ8N122 1335 aa20.09■□□□□ 0.81
CTSB-222ENST00000531551 CCNT1O60563 726 aaKnown RBP20.09■□□□□ 0.81
CTSB-222ENST00000531551 NR3C2P08235 984 aa20.09■□□□□ 0.81
CTSB-222ENST00000531551 HOXD10P28358 340 aa20.09■□□□□ 0.81
CTSB-222ENST00000531551 FLT3LGP49771 235 aa20.09■□□□□ 0.81
CTSB-222ENST00000531551 CEBPZQ03701 1054 aaKnown RBP20.09■□□□□ 0.81
CTSB-222ENST00000531551 ARHGEF6Q15052 776 aa20.09■□□□□ 0.81
CTSB-222ENST00000531551 RILPL1Q5EBL4 403 aa20.09■□□□□ 0.81
CTSB-222ENST00000531551 FGD4Q96M96 766 aa20.09■□□□□ 0.81
CTSB-222ENST00000531551 MPHOSPH6Q99547 160 aaKnown RBP20.09■□□□□ 0.81
CTSB-222ENST00000531551 RTEL1Q9NZ71 1219 aa20.09■□□□□ 0.81
CTSB-222ENST00000531551 ATP6V1DQ9Y5K8 247 aa20.09■□□□□ 0.81
CTSB-222ENST00000531551 HSPA1AP0DMV8 641 aaKnown RBP20.09■□□□□ 0.81
CTSB-222ENST00000531551 HSPA1BP0DMV9 641 aaKnown RBP20.09■□□□□ 0.81
CTSB-222ENST00000531551 TOB1P50616 345 aaPredicted RBP20.09■□□□□ 0.81
CTSB-222ENST00000531551 PDE4DQ08499 809 aa20.09■□□□□ 0.81
CTSB-222ENST00000531551 MAML3Q96JK9 1138 aa20.09■□□□□ 0.81
CTSB-222ENST00000531551 CHAMP1Q96JM3 812 aa20.09■□□□□ 0.81
CTSB-222ENST00000531551 RBBP6Q7Z6E9 1792 aaKnown RBP20.09■□□□□ 0.81
CTSB-222ENST00000531551 PLXNB2O15031 1838 aa20.08■□□□□ 0.81
CTSB-222ENST00000531551 B4DLN1 442 aa20.08■□□□□ 0.81
CTSB-222ENST00000531551 WNT7AO00755 349 aa20.08■□□□□ 0.81
CTSB-222ENST00000531551 FOXN1O15353 648 aa20.08■□□□□ 0.81
CTSB-222ENST00000531551 CCND2P30279 289 aa20.08■□□□□ 0.81
CTSB-222ENST00000531551 ZNF174Q15697 407 aa20.08■□□□□ 0.81
CTSB-222ENST00000531551 TTC38Q5R3I4 469 aa20.08■□□□□ 0.81
CTSB-222ENST00000531551 USP6NLQ92738 828 aa20.08■□□□□ 0.81
CTSB-222ENST00000531551 IWS1Q96ST2 819 aa20.08■□□□□ 0.81
CTSB-222ENST00000531551 TDP2O95551 362 aa20.07■□□□□ 0.8
CTSB-222ENST00000531551 NCLP19338 710 aaKnown RBP20.07■□□□□ 0.8
CTSB-222ENST00000531551 MCM7P33993 719 aa20.07■□□□□ 0.8
CTSB-222ENST00000531551 USP11P51784 963 aa20.07■□□□□ 0.8
CTSB-222ENST00000531551 DNM1Q05193 864 aaKnown RBP20.07■□□□□ 0.8
CTSB-222ENST00000531551 STXBP2Q15833 593 aa20.07■□□□□ 0.8
CTSB-222ENST00000531551 PCNX4Q63HM2 1172 aa20.07■□□□□ 0.8
CTSB-222ENST00000531551 EEPD1Q7L9B9 569 aa20.07■□□□□ 0.8
CTSB-222ENST00000531551 APBA2Q99767 749 aa20.07■□□□□ 0.8
CTSB-222ENST00000531551 FTOQ9C0B1 505 aaKnown RBP eCLIP20.07■□□□□ 0.83e-19■□□□□ 9.3
CTSB-222ENST00000531551 TFIP11Q9UBB9 837 aaKnown RBP20.07■□□□□ 0.8
CTSB-222ENST00000531551 SRRDQ9UH36 339 aa20.07■□□□□ 0.8
CTSB-222ENST00000531551 DIS3Q9Y2L1 958 aaKnown RBP20.07■□□□□ 0.8
CTSB-222ENST00000531551 PCDHB6Q9Y5E3 794 aa20.07■□□□□ 0.8
CTSB-222ENST00000531551 FRMPD4Q14CM0 1322 aa20.07■□□□□ 0.8
CTSB-222ENST00000531551 ZSWIM8A7E2V4 1837 aa20.07■□□□□ 0.8
CTSB-222ENST00000531551 ASB14A6NK59 587 aa20.07■□□□□ 0.8
CTSB-222ENST00000531551 TRAPPC10P48553 1259 aa20.07■□□□□ 0.8
CTSB-222ENST00000531551 MRPS9P82933 396 aaKnown RBP20.07■□□□□ 0.8
CTSB-222ENST00000531551 CCL14Q16627 93 aa20.07■□□□□ 0.8
CTSB-222ENST00000531551 VSIG10LQ86VR7 867 aa20.07■□□□□ 0.8
CTSB-222ENST00000531551 CRYGNQ8WXF5 182 aa20.07■□□□□ 0.8
CTSB-222ENST00000531551 ZNF396Q96N95 335 aaPredicted RBP20.07■□□□□ 0.8
CTSB-222ENST00000531551 TRIM17Q9Y577 477 aa20.07■□□□□ 0.8
CTSB-222ENST00000531551 EDIL3O43854 480 aa20.06■□□□□ 0.8
CTSB-222ENST00000531551 HOXC6P09630 235 aa20.06■□□□□ 0.8
CTSB-222ENST00000531551 ARMCX2Q7L311 632 aa20.06■□□□□ 0.8
CTSB-222ENST00000531551 CYP2W1Q8TAV3 490 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms