RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 TICAM2Q86XR7 235 aa21.62■■□□□ 1.05
SSSCA1-206ENST00000531405 UBA5Q9GZZ9 404 aa21.62■■□□□ 1.05
SSSCA1-206ENST00000531405 GPHNQ9NQX3 736 aaPredicted RBP21.62■■□□□ 1.05
SSSCA1-206ENST00000531405 SUPT20HL2P0C7V6 817 aa21.61■■□□□ 1.05
SSSCA1-206ENST00000531405 PCP11498 1178 aaKnown RBP21.61■■□□□ 1.05
SSSCA1-206ENST00000531405 SDSP20132 328 aa21.61■■□□□ 1.05
SSSCA1-206ENST00000531405 DNERQ8NFT8 737 aa21.61■■□□□ 1.05
SSSCA1-206ENST00000531405 SCFD2Q8WU76 684 aa21.61■■□□□ 1.05
SSSCA1-206ENST00000531405 ESR2Q92731 530 aa21.61■■□□□ 1.05
SSSCA1-206ENST00000531405 RNF41Q9H4P4 317 aaPredicted RBP21.61■■□□□ 1.05
SSSCA1-206ENST00000531405 PNMA2Q9UL42 364 aa21.61■■□□□ 1.05
SSSCA1-206ENST00000531405 PRRC2BQ5JSZ5 2229 aaKnown RBP21.6■■□□□ 1.05
SSSCA1-206ENST00000531405 ARIH2O95376 493 aa21.6■■□□□ 1.05
SSSCA1-206ENST00000531405 TXNP10599 105 aaKnown RBP21.6■■□□□ 1.05
SSSCA1-206ENST00000531405 GPATCH4Q5T3I0 446 aaKnown RBP21.6■■□□□ 1.05
SSSCA1-206ENST00000531405 TBC1D5Q92609 795 aa21.6■■□□□ 1.05
SSSCA1-206ENST00000531405 MPHOSPH6Q99547 160 aaKnown RBP21.6■■□□□ 1.05
SSSCA1-206ENST00000531405 RAD50Q92878 1312 aa21.59■■□□□ 1.05
SSSCA1-206ENST00000531405 ZNF213O14771 459 aa21.59■■□□□ 1.05
SSSCA1-206ENST00000531405 NKRFO15226 690 aaKnown RBP eCLIP21.59■■□□□ 1.05
SSSCA1-206ENST00000531405 KDM4AO75164 1064 aa21.59■■□□□ 1.05
SSSCA1-206ENST00000531405 ATP2A2P16615 1042 aaKnown RBP21.59■■□□□ 1.05
SSSCA1-206ENST00000531405 MFAP1P55081 439 aaKnown RBP21.59■■□□□ 1.05
SSSCA1-206ENST00000531405 CHMP4BP1P59074 171 aa21.59■■□□□ 1.05
SSSCA1-206ENST00000531405 CDC37Q16543 378 aaPredicted RBP21.59■■□□□ 1.05
SSSCA1-206ENST00000531405 BRDTQ58F21 947 aaPredicted RBP21.59■■□□□ 1.05
SSSCA1-206ENST00000531405 PPP2R2DQ66LE6 453 aa21.59■■□□□ 1.05
SSSCA1-206ENST00000531405 PNMA1Q8ND90 353 aa21.59■■□□□ 1.05
SSSCA1-206ENST00000531405 A6NJR5 290 aa21.58■■□□□ 1.05
SSSCA1-206ENST00000531405 CWC27Q6UX04 472 aaKnown RBP21.58■■□□□ 1.05
SSSCA1-206ENST00000531405 DGKHQ86XP1 1220 aa21.58■■□□□ 1.05
SSSCA1-206ENST00000531405 PLEKHM2Q8IWE5 1019 aa21.58■■□□□ 1.05
SSSCA1-206ENST00000531405 SMC5Q8IY18 1101 aa21.58■■□□□ 1.05
SSSCA1-206ENST00000531405 THEGQ9P2T0 379 aa21.58■■□□□ 1.05
SSSCA1-206ENST00000531405 PCDHA11Q9Y5I1 949 aa21.58■■□□□ 1.05
SSSCA1-206ENST00000531405 BAZ2BQ9UIF8 2168 aaKnown RBP21.57■■□□□ 1.04
SSSCA1-206ENST00000531405 B4E1Z4 1266 aa21.57■■□□□ 1.04
SSSCA1-206ENST00000531405 NFRKBQ6P4R8 1299 aa21.57■■□□□ 1.04
SSSCA1-206ENST00000531405 ADGRF4Q8IZF3 695 aa21.57■■□□□ 1.04
SSSCA1-206ENST00000531405 TAAR1Q96RJ0 339 aa21.57■■□□□ 1.04
SSSCA1-206ENST00000531405 COL20A1Q9P218 1284 aa21.57■■□□□ 1.04
SSSCA1-206ENST00000531405 PFKMP08237 780 aa21.56■■□□□ 1.04
SSSCA1-206ENST00000531405 SEPT14Q6ZU15 432 aa21.56■■□□□ 1.04
SSSCA1-206ENST00000531405 CHD1LQ86WJ1 897 aa21.56■■□□□ 1.04
SSSCA1-206ENST00000531405 IQCA1Q86XH1 822 aa21.56■■□□□ 1.04
SSSCA1-206ENST00000531405 MICALL1Q8N3F8 863 aa21.56■■□□□ 1.04
SSSCA1-206ENST00000531405 RGS22Q8NE09 1264 aa21.56■■□□□ 1.04
SSSCA1-206ENST00000531405 ATXN2LQ8WWM7 1075 aaKnown RBP21.56■■□□□ 1.04
SSSCA1-206ENST00000531405 KAT14Q9H8E8 782 aa21.56■■□□□ 1.04
SSSCA1-206ENST00000531405 COL4A4P53420 1690 aaPredicted RBP21.56■■□□□ 1.04
SSSCA1-206ENST00000531405 ABCB11O95342 1321 aa21.55■■□□□ 1.04
SSSCA1-206ENST00000531405 B4DLN1 442 aa21.55■■□□□ 1.04
SSSCA1-206ENST00000531405 KPNA6O60684 536 aa21.55■■□□□ 1.04
SSSCA1-206ENST00000531405 IGHDP01880 384 aa21.55■■□□□ 1.04
SSSCA1-206ENST00000531405 IQCF3P0C7M6 154 aa21.55■■□□□ 1.04
SSSCA1-206ENST00000531405 MRPL12P52815 198 aaKnown RBP21.55■■□□□ 1.04
SSSCA1-206ENST00000531405 LY6KQ17RY6 165 aa21.55■■□□□ 1.04
SSSCA1-206ENST00000531405 CCDC62Q6P9F0 684 aa21.55■■□□□ 1.04
SSSCA1-206ENST00000531405 ENAHQ8N8S7 591 aaPredicted RBP21.55■■□□□ 1.04
SSSCA1-206ENST00000531405 SYTL5Q8TDW5 730 aaPredicted RBP21.55■■□□□ 1.04
SSSCA1-206ENST00000531405 AFG1LQ8WV93 481 aa21.55■■□□□ 1.04
SSSCA1-206ENST00000531405 ASB2Q96Q27 587 aa21.55■■□□□ 1.04
SSSCA1-206ENST00000531405 DIAPH3Q9NSV4 1193 aa21.55■■□□□ 1.04
SSSCA1-206ENST00000531405 TNFRSF10AO00220 468 aa21.54■■□□□ 1.04
SSSCA1-206ENST00000531405 PITPNM1O00562 1244 aa21.54■■□□□ 1.04
SSSCA1-206ENST00000531405 CA3P07451 260 aa21.54■■□□□ 1.04
SSSCA1-206ENST00000531405 QRICH1Q2TAL8 776 aa21.54■■□□□ 1.04
SSSCA1-206ENST00000531405 CHST3Q7LGC8 479 aa21.54■■□□□ 1.04
SSSCA1-206ENST00000531405 RETREG2Q8NC44 543 aa21.54■■□□□ 1.04
SSSCA1-206ENST00000531405 ZSCAN10Q96SZ4 725 aaPredicted RBP21.54■■□□□ 1.04
SSSCA1-206ENST00000531405 RWDD1Q9H446 243 aaPredicted RBP21.54■■□□□ 1.04
SSSCA1-206ENST00000531405 OSBPL3Q9H4L5 887 aa21.54■■□□□ 1.04
SSSCA1-206ENST00000531405 CERS4Q9HA82 394 aa21.54■■□□□ 1.04
SSSCA1-206ENST00000531405 NOD1Q9Y239 953 aa21.54■■□□□ 1.04
SSSCA1-206ENST00000531405 DOCK5Q9H7D0 1870 aa21.54■■□□□ 1.04
SSSCA1-206ENST00000531405 RFXAPO00287 272 aa21.53■■□□□ 1.04
SSSCA1-206ENST00000531405 DHX16O60231 1041 aaKnown RBP21.53■■□□□ 1.04
SSSCA1-206ENST00000531405 MMP3P08254 477 aa21.53■■□□□ 1.04
SSSCA1-206ENST00000531405 ACTN1P12814 892 aa21.53■■□□□ 1.04
SSSCA1-206ENST00000531405 RFC2P35250 354 aa21.53■■□□□ 1.04
SSSCA1-206ENST00000531405 NUCB1Q02818 461 aa21.53■■□□□ 1.04
SSSCA1-206ENST00000531405 PTPN11Q06124 597 aaPredicted RBP21.53■■□□□ 1.04
SSSCA1-206ENST00000531405 ARHGAP1Q07960 439 aa21.53■■□□□ 1.04
SSSCA1-206ENST00000531405 ASPRV1Q53RT3 343 aa21.53■■□□□ 1.04
SSSCA1-206ENST00000531405 TMEM67Q5HYA8 995 aa21.53■■□□□ 1.04
SSSCA1-206ENST00000531405 ANKS1AQ92625 1134 aa21.53■■□□□ 1.04
SSSCA1-206ENST00000531405 FTOQ9C0B1 505 aaKnown RBP eCLIP21.53■■□□□ 1.04
SSSCA1-206ENST00000531405 VAT1LQ9HCJ6 419 aa21.53■■□□□ 1.04
SSSCA1-206ENST00000531405 ZSWIM5Q9P217 1185 aa21.53■■□□□ 1.04
SSSCA1-206ENST00000531405 RBAK-RBAKDNI3L0D1 243 aa21.52■■□□□ 1.04
SSSCA1-206ENST00000531405 GH1P01241 217 aa21.52■■□□□ 1.04
SSSCA1-206ENST00000531405 MRPS5P82675 430 aaKnown RBP21.52■■□□□ 1.04
SSSCA1-206ENST00000531405 PTGISQ16647 500 aa21.52■■□□□ 1.04
SSSCA1-206ENST00000531405 CCDC178Q5BJE1 867 aa21.52■■□□□ 1.04
SSSCA1-206ENST00000531405 ADAMTS19Q8TE59 1207 aa21.52■■□□□ 1.04
SSSCA1-206ENST00000531405 NSUN6Q8TEA1 469 aaKnown RBP21.52■■□□□ 1.04
SSSCA1-206ENST00000531405 CTAGE1Q96RT6 745 aa21.52■■□□□ 1.04
SSSCA1-206ENST00000531405 RMDN3Q96TC7 470 aa21.52■■□□□ 1.04
SSSCA1-206ENST00000531405 JMJD4Q9H9V9 463 aa21.52■■□□□ 1.04
SSSCA1-206ENST00000531405 ARHGEF15O94989 841 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms