RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 CLIC4Q9Y696 253 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 IVNS1ABPQ9Y6Y0 642 aa21.71■■□□□ 1.07
SMPD1-205ENST00000531303 LCTP09848 1927 aa21.7■■□□□ 1.06
SMPD1-205ENST00000531303 MAPK4P31152 587 aa21.7■■□□□ 1.06
SMPD1-205ENST00000531303 KRT85P78386 507 aa21.7■■□□□ 1.06
SMPD1-205ENST00000531303 ARHGEF16Q5VV41 709 aa21.7■■□□□ 1.06
SMPD1-205ENST00000531303 ZFP91Q96JP5 570 aaPredicted RBP21.7■■□□□ 1.06
SMPD1-205ENST00000531303 THSD7BQ9C0I4 1608 aa21.69■■□□□ 1.06
SMPD1-205ENST00000531303 FIBPO43427 364 aa21.69■■□□□ 1.06
SMPD1-205ENST00000531303 MCM7P33993 719 aa21.69■■□□□ 1.06
SMPD1-205ENST00000531303 ARHGAP4P98171 946 aa21.69■■□□□ 1.06
SMPD1-205ENST00000531303 GDPD2Q9HCC8 539 aa21.69■■□□□ 1.06
SMPD1-205ENST00000531303 CCNT1O60563 726 aaKnown RBP21.68■■□□□ 1.06
SMPD1-205ENST00000531303 SREBF1P36956 1147 aa21.68■■□□□ 1.06
SMPD1-205ENST00000531303 TRAPPC10P48553 1259 aa21.68■■□□□ 1.06
SMPD1-205ENST00000531303 ANO1Q5XXA6 986 aa21.68■■□□□ 1.06
SMPD1-205ENST00000531303 IL31RAQ8NI17 732 aa21.68■■□□□ 1.06
SMPD1-205ENST00000531303 PXMP2Q9NR77 195 aa21.68■■□□□ 1.06
SMPD1-205ENST00000531303 DDX49Q9Y6V7 483 aaKnown RBP21.68■■□□□ 1.06
SMPD1-205ENST00000531303 EDIL3O43854 480 aa21.67■■□□□ 1.06
SMPD1-205ENST00000531303 TDP2O95551 362 aa21.67■■□□□ 1.06
SMPD1-205ENST00000531303 MYCLP12524 364 aaPredicted RBP21.67■■□□□ 1.06
SMPD1-205ENST00000531303 PTPREP23469 700 aa21.67■■□□□ 1.06
SMPD1-205ENST00000531303 ADORA2AP29274 412 aa21.67■■□□□ 1.06
SMPD1-205ENST00000531303 ZNF76P36508 570 aa21.67■■□□□ 1.06
SMPD1-205ENST00000531303 SF3A1Q15459 793 aaKnown RBP21.67■■□□□ 1.06
SMPD1-205ENST00000531303 NSUN6Q8TEA1 469 aaKnown RBP21.67■■□□□ 1.06
SMPD1-205ENST00000531303 GBP4Q96PP9 640 aa21.67■■□□□ 1.06
SMPD1-205ENST00000531303 CFAP45Q9UL16 551 aa21.67■■□□□ 1.06
SMPD1-205ENST00000531303 MGAMO43451 1857 aa21.67■■□□□ 1.06
SMPD1-205ENST00000531303 SOWAHBA6NEL2 793 aa21.66■■□□□ 1.06
SMPD1-205ENST00000531303 STRNO43815 780 aa21.66■■□□□ 1.06
SMPD1-205ENST00000531303 STK38Q15208 465 aa21.66■■□□□ 1.06
SMPD1-205ENST00000531303 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.66■■□□□ 1.06
SMPD1-205ENST00000531303 MAF1Q9H063 256 aa21.66■■□□□ 1.06
SMPD1-205ENST00000531303 RPTORQ8N122 1335 aa21.66■■□□□ 1.06
SMPD1-205ENST00000531303 ZSWIM8A7E2V4 1837 aa21.66■■□□□ 1.06
SMPD1-205ENST00000531303 PLXNA1Q9UIW2 1896 aa21.65■■□□□ 1.06
SMPD1-205ENST00000531303 COBLO75128 1261 aa21.65■■□□□ 1.06
SMPD1-205ENST00000531303 USP11P51784 963 aa21.65■■□□□ 1.06
SMPD1-205ENST00000531303 PGM5Q15124 567 aa21.65■■□□□ 1.06
SMPD1-205ENST00000531303 TPRNQ4KMQ1 711 aa21.65■■□□□ 1.06
SMPD1-205ENST00000531303 ATL3Q6DD88 541 aa21.65■■□□□ 1.06
SMPD1-205ENST00000531303 DPP9Q86TI2 863 aa21.65■■□□□ 1.06
SMPD1-205ENST00000531303 FAM133AQ8N9E0 248 aa21.65■■□□□ 1.06
SMPD1-205ENST00000531303 UIMC1Q96RL1 719 aa21.65■■□□□ 1.06
SMPD1-205ENST00000531303 PDCD2LQ9BRP1 358 aa21.65■■□□□ 1.06
SMPD1-205ENST00000531303 ARHGAP39Q9C0H5 1083 aa21.65■■□□□ 1.06
SMPD1-205ENST00000531303 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.65■■□□□ 1.06
SMPD1-205ENST00000531303 RTEL1Q9NZ71 1219 aa21.65■■□□□ 1.06
SMPD1-205ENST00000531303 TSKSQ9UJT2 592 aa21.65■■□□□ 1.06
SMPD1-205ENST00000531303 DNAJC25-GNG10A0A024R161 153 aa21.64■■□□□ 1.06
SMPD1-205ENST00000531303 SLC15A5A6NIM6 579 aa21.64■■□□□ 1.06
SMPD1-205ENST00000531303 TNPO2O14787 897 aaKnown RBP21.64■■□□□ 1.06
SMPD1-205ENST00000531303 CTGFP29279 349 aa21.64■■□□□ 1.06
SMPD1-205ENST00000531303 PSMC4P43686 418 aa21.64■■□□□ 1.06
SMPD1-205ENST00000531303 LACTBP83111 547 aaPredicted RBP21.64■■□□□ 1.06
SMPD1-205ENST00000531303 GRB14Q14449 540 aa21.64■■□□□ 1.06
SMPD1-205ENST00000531303 CRYGNQ8WXF5 182 aa21.64■■□□□ 1.06
SMPD1-205ENST00000531303 SPATA32Q96LK8 384 aa21.64■■□□□ 1.06
SMPD1-205ENST00000531303 BEGAINQ9BUH8 593 aa21.64■■□□□ 1.06
SMPD1-205ENST00000531303 ADD3Q9UEY8 706 aaKnown RBP21.64■■□□□ 1.06
SMPD1-205ENST00000531303 MRVI1Q9Y6F6 885 aa21.64■■□□□ 1.06
SMPD1-205ENST00000531303 ASTN1O14525 1302 aa21.64■■□□□ 1.06
SMPD1-205ENST00000531303 NR3C2P08235 984 aa21.64■■□□□ 1.05
SMPD1-205ENST00000531303 ALDH5A1P51649 535 aaPredicted RBP21.64■■□□□ 1.05
SMPD1-205ENST00000531303 SP3Q02447 781 aa21.64■■□□□ 1.05
SMPD1-205ENST00000531303 ABRAQ8N0Z2 381 aa21.64■■□□□ 1.05
SMPD1-205ENST00000531303 CYP2W1Q8TAV3 490 aa21.64■■□□□ 1.05
SMPD1-205ENST00000531303 LEO1Q8WVC0 666 aaPredicted RBP21.64■■□□□ 1.05
SMPD1-205ENST00000531303 CFHR5Q9BXR6 569 aa21.64■■□□□ 1.05
SMPD1-205ENST00000531303 POLR3EQ9NVU0 708 aa21.64■■□□□ 1.05
SMPD1-205ENST00000531303 DDX25Q9UHL0 483 aaKnown RBP21.64■■□□□ 1.05
SMPD1-205ENST00000531303 FRMPD4Q14CM0 1322 aa21.63■■□□□ 1.05
SMPD1-205ENST00000531303 MCM3APO60318 1980 aa21.63■■□□□ 1.05
SMPD1-205ENST00000531303 SLC37A4O43826 429 aa21.63■■□□□ 1.05
SMPD1-205ENST00000531303 CYP3A4P08684 503 aa21.63■■□□□ 1.05
SMPD1-205ENST00000531303 MARCKSP29966 332 aaPredicted RBP21.63■■□□□ 1.05
SMPD1-205ENST00000531303 CCND2P30279 289 aa21.63■■□□□ 1.05
SMPD1-205ENST00000531303 NASPP49321 788 aaPredicted RBP21.63■■□□□ 1.05
SMPD1-205ENST00000531303 FCGRTP55899 365 aa21.63■■□□□ 1.05
SMPD1-205ENST00000531303 MAP2K1Q02750 393 aaPredicted RBP21.63■■□□□ 1.05
SMPD1-205ENST00000531303 PTGDRQ13258 359 aa21.63■■□□□ 1.05
SMPD1-205ENST00000531303 PRR16Q569H4 304 aa21.63■■□□□ 1.05
SMPD1-205ENST00000531303 CLEC17AQ6ZS10 378 aa21.63■■□□□ 1.05
SMPD1-205ENST00000531303 DNERQ8NFT8 737 aa21.63■■□□□ 1.05
SMPD1-205ENST00000531303 SCAND2PQ9GZW5 306 aaPredicted RBP21.63■■□□□ 1.05
SMPD1-205ENST00000531303 CEP131Q9UPN4 1083 aa21.63■■□□□ 1.05
SMPD1-205ENST00000531303 FAM86B1E9PN63 330 aa21.62■■□□□ 1.05
SMPD1-205ENST00000531303 FAM86B2P0C5J1 330 aa21.62■■□□□ 1.05
SMPD1-205ENST00000531303 MRPS9P82933 396 aaKnown RBP21.62■■□□□ 1.05
SMPD1-205ENST00000531303 KIF22Q14807 665 aa21.62■■□□□ 1.05
SMPD1-205ENST00000531303 PTPAQ15257 358 aa21.62■■□□□ 1.05
SMPD1-205ENST00000531303 PCNX4Q63HM2 1172 aa21.62■■□□□ 1.05
SMPD1-205ENST00000531303 DNAJC5GQ8N7S2 189 aa21.62■■□□□ 1.05
SMPD1-205ENST00000531303 LINC00301Q8NCQ3 95 aa21.62■■□□□ 1.05
SMPD1-205ENST00000531303 TRIM47Q96LD4 638 aa21.62■■□□□ 1.05
SMPD1-205ENST00000531303 FGD4Q96M96 766 aa21.62■■□□□ 1.05
SMPD1-205ENST00000531303 NAP1L4Q99733 375 aaKnown RBP21.62■■□□□ 1.05
SMPD1-205ENST00000531303 GPR25O00155 361 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms