RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 TTLL4Q14679 1199 aa18.52■□□□□ 0.56
CHMP4A-204ENST00000530996 CWC27Q6UX04 472 aaKnown RBP18.52■□□□□ 0.56
CHMP4A-204ENST00000530996 PNMA1Q8ND90 353 aa18.52■□□□□ 0.56
CHMP4A-204ENST00000530996 IL27Q8NEV9 243 aa18.52■□□□□ 0.56
CHMP4A-204ENST00000530996 COPS5Q92905 334 aa18.52■□□□□ 0.56
CHMP4A-204ENST00000530996 UBA5Q9GZZ9 404 aa18.52■□□□□ 0.56
CHMP4A-204ENST00000530996 RWDD1Q9H446 243 aaPredicted RBP18.52■□□□□ 0.56
CHMP4A-204ENST00000530996 THEGQ9P2T0 379 aa18.52■□□□□ 0.56
CHMP4A-204ENST00000530996 RBM47A0AV96 593 aaKnown RBP18.51■□□□□ 0.55
CHMP4A-204ENST00000530996 PFKMP08237 780 aa18.51■□□□□ 0.55
CHMP4A-204ENST00000530996 NBPF20Q3BBV1 942 aa18.51■□□□□ 0.55
CHMP4A-204ENST00000530996 CCDC178Q5BJE1 867 aa18.51■□□□□ 0.55
CHMP4A-204ENST00000530996 YTHDC1Q96MU7 727 aaKnown RBP18.51■□□□□ 0.55
CHMP4A-204ENST00000530996 ACTN1P12814 892 aa18.5■□□□□ 0.55
CHMP4A-204ENST00000530996 MYOGP15173 224 aa18.5■□□□□ 0.55
CHMP4A-204ENST00000530996 EDNRBP24530 442 aa18.5■□□□□ 0.55
CHMP4A-204ENST00000530996 DGKHQ86XP1 1220 aa18.5■□□□□ 0.55
CHMP4A-204ENST00000530996 RETREG2Q8NC44 543 aa18.5■□□□□ 0.55
CHMP4A-204ENST00000530996 FTOQ9C0B1 505 aaKnown RBP eCLIP18.5■□□□□ 0.551e-12■■■■□ 25.8
CHMP4A-204ENST00000530996 ABCB11O95342 1321 aa18.49■□□□□ 0.55
CHMP4A-204ENST00000530996 B4E1Z4 1266 aa18.49■□□□□ 0.55
CHMP4A-204ENST00000530996 KPNA6O60684 536 aa18.49■□□□□ 0.55
CHMP4A-204ENST00000530996 ADGRE1Q14246 886 aa18.49■□□□□ 0.55
CHMP4A-204ENST00000530996 SEPT14Q6ZU15 432 aa18.49■□□□□ 0.55
CHMP4A-204ENST00000530996 CHST3Q7LGC8 479 aa18.49■□□□□ 0.55
CHMP4A-204ENST00000530996 CHD1LQ86WJ1 897 aa18.49■□□□□ 0.55
CHMP4A-204ENST00000530996 UBAC1Q9BSL1 405 aa18.49■□□□□ 0.55
CHMP4A-204ENST00000530996 PCDHA11Q9Y5I1 949 aa18.49■□□□□ 0.55
CHMP4A-204ENST00000530996 HIP1O00291 1037 aa18.48■□□□□ 0.55
CHMP4A-204ENST00000530996 ARIH2O95376 493 aa18.48■□□□□ 0.55
CHMP4A-204ENST00000530996 IMMTQ16891 758 aaKnown RBP18.48■□□□□ 0.55
CHMP4A-204ENST00000530996 ASPRV1Q53RT3 343 aa18.48■□□□□ 0.55
CHMP4A-204ENST00000530996 NFRKBQ6P4R8 1299 aa18.48■□□□□ 0.55
CHMP4A-204ENST00000530996 ADGRF4Q8IZF3 695 aa18.48■□□□□ 0.55
CHMP4A-204ENST00000530996 CCDC155Q8N6L0 562 aa18.48■□□□□ 0.55
CHMP4A-204ENST00000530996 ZSCAN10Q96SZ4 725 aaPredicted RBP18.48■□□□□ 0.55
CHMP4A-204ENST00000530996 A6NJR5 290 aa18.47■□□□□ 0.55
CHMP4A-204ENST00000530996 GH1P01241 217 aa18.47■□□□□ 0.55
CHMP4A-204ENST00000530996 PARP1P09874 1014 aaKnown RBP18.47■□□□□ 0.55
CHMP4A-204ENST00000530996 RFC2P35250 354 aa18.47■□□□□ 0.55
CHMP4A-204ENST00000530996 NT5C2P49902 561 aa18.47■□□□□ 0.55
CHMP4A-204ENST00000530996 BFSP2Q13515 415 aa18.47■□□□□ 0.55
CHMP4A-204ENST00000530996 AAMPQ13685 434 aa18.47■□□□□ 0.55
CHMP4A-204ENST00000530996 SKIV2LQ15477 1246 aaKnown RBP18.47■□□□□ 0.55
CHMP4A-204ENST00000530996 TMEM67Q5HYA8 995 aa18.47■□□□□ 0.55
CHMP4A-204ENST00000530996 MCF2L2Q86YR7 1114 aa18.47■□□□□ 0.55
CHMP4A-204ENST00000530996 PLEKHM2Q8IWE5 1019 aa18.47■□□□□ 0.55
CHMP4A-204ENST00000530996 SMC5Q8IY18 1101 aa18.47■□□□□ 0.55
CHMP4A-204ENST00000530996 NSUN6Q8TEA1 469 aaKnown RBP18.47■□□□□ 0.55
CHMP4A-204ENST00000530996 SPTBN5Q9NRC6 3674 aaKnown RBP18.46■□□□□ 0.55
CHMP4A-204ENST00000530996 PITPNM1O00562 1244 aa18.46■□□□□ 0.55
CHMP4A-204ENST00000530996 CA3P07451 260 aa18.46■□□□□ 0.55
CHMP4A-204ENST00000530996 MMP3P08254 477 aa18.46■□□□□ 0.55
CHMP4A-204ENST00000530996 EIF2AK2P19525 551 aaKnown RBP18.46■□□□□ 0.55
CHMP4A-204ENST00000530996 QRICH1Q2TAL8 776 aa18.46■□□□□ 0.55
CHMP4A-204ENST00000530996 ARHGEF16Q5VV41 709 aa18.46■□□□□ 0.55
CHMP4A-204ENST00000530996 FBXO11Q86XK2 927 aa18.46■□□□□ 0.55
CHMP4A-204ENST00000530996 ENAHQ8N8S7 591 aaPredicted RBP18.46■□□□□ 0.55
CHMP4A-204ENST00000530996 SYTL5Q8TDW5 730 aaPredicted RBP18.46■□□□□ 0.55
CHMP4A-204ENST00000530996 AFG1LQ8WV93 481 aa18.46■□□□□ 0.55
CHMP4A-204ENST00000530996 ATXN2LQ8WWM7 1075 aaKnown RBP18.46■□□□□ 0.55
CHMP4A-204ENST00000530996 RMDN3Q96TC7 470 aa18.46■□□□□ 0.55
CHMP4A-204ENST00000530996 KRT23Q9C075 422 aa18.46■□□□□ 0.55
CHMP4A-204ENST00000530996 TSPYL2Q9H2G4 693 aaPredicted RBP18.46■□□□□ 0.55
CHMP4A-204ENST00000530996 VAT1LQ9HCJ6 419 aa18.46■□□□□ 0.55
CHMP4A-204ENST00000530996 CTNNA3Q9UI47 895 aa18.46■□□□□ 0.55
CHMP4A-204ENST00000530996 MRPL11Q9Y3B7 192 aaKnown RBP18.46■□□□□ 0.55
CHMP4A-204ENST00000530996 TNFRSF10AO00220 468 aa18.45■□□□□ 0.54
CHMP4A-204ENST00000530996 KCNJ6P48051 423 aa18.45■□□□□ 0.54
CHMP4A-204ENST00000530996 MRPS5P82675 430 aaKnown RBP18.45■□□□□ 0.54
CHMP4A-204ENST00000530996 NUCB1Q02818 461 aa18.45■□□□□ 0.54
CHMP4A-204ENST00000530996 PTPN11Q06124 597 aaPredicted RBP18.45■□□□□ 0.54
CHMP4A-204ENST00000530996 STXBP2Q15833 593 aa18.45■□□□□ 0.54
CHMP4A-204ENST00000530996 PTGISQ16647 500 aa18.45■□□□□ 0.54
CHMP4A-204ENST00000530996 LY6KQ17RY6 165 aa18.45■□□□□ 0.54
CHMP4A-204ENST00000530996 IFIT1BQ5T764 474 aaKnown RBP18.45■□□□□ 0.54
CHMP4A-204ENST00000530996 RGS22Q8NE09 1264 aa18.45■□□□□ 0.54
CHMP4A-204ENST00000530996 TAAR1Q96RJ0 339 aa18.45■□□□□ 0.54
CHMP4A-204ENST00000530996 SLC9A7Q96T83 725 aa18.45■□□□□ 0.54
CHMP4A-204ENST00000530996 CNNM2Q9H8M5 875 aa18.45■□□□□ 0.54
CHMP4A-204ENST00000530996 CERS4Q9HA82 394 aa18.45■□□□□ 0.54
CHMP4A-204ENST00000530996 LAMA4Q16363 1823 aa18.44■□□□□ 0.54
CHMP4A-204ENST00000530996 GTPBP6O43824 516 aaPredicted RBP18.44■□□□□ 0.54
CHMP4A-204ENST00000530996 CFBP00751 764 aa18.44■□□□□ 0.54
CHMP4A-204ENST00000530996 ADAMTS19Q8TE59 1207 aa18.44■□□□□ 0.54
CHMP4A-204ENST00000530996 TBC1D5Q92609 795 aa18.44■□□□□ 0.54
CHMP4A-204ENST00000530996 ASB2Q96Q27 587 aa18.44■□□□□ 0.54
CHMP4A-204ENST00000530996 DSCC1Q9BVC3 393 aa18.44■□□□□ 0.54
CHMP4A-204ENST00000530996 COL20A1Q9P218 1284 aa18.44■□□□□ 0.54
CHMP4A-204ENST00000530996 MRVI1Q9Y6F6 885 aa18.44■□□□□ 0.54
CHMP4A-204ENST00000530996 CHD9Q3L8U1 2897 aa18.43■□□□□ 0.54
CHMP4A-204ENST00000530996 IQCF3P0C7M6 154 aa18.43■□□□□ 0.54
CHMP4A-204ENST00000530996 ARHGAP1Q07960 439 aa18.43■□□□□ 0.54
CHMP4A-204ENST00000530996 VWCEQ96DN2 955 aa18.43■□□□□ 0.54
CHMP4A-204ENST00000530996 IWS1Q96ST2 819 aa18.43■□□□□ 0.54
CHMP4A-204ENST00000530996 OSBPL3Q9H4L5 887 aa18.43■□□□□ 0.54
CHMP4A-204ENST00000530996 KIF28PB7ZC32 967 aa18.42■□□□□ 0.54
CHMP4A-204ENST00000530996 IGHDP01880 384 aa18.42■□□□□ 0.54
CHMP4A-204ENST00000530996 ZNF286BP0CG31 522 aa18.42■□□□□ 0.54
CHMP4A-204ENST00000530996 CASTP20810 708 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms