RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 PPFIA3O75145 1194 aa17.58■□□□□ 0.4
CCS-206ENST00000530961 CTDNEP1O95476 244 aa17.58■□□□□ 0.4
CCS-206ENST00000530961 ALDH5A1P51649 535 aaPredicted RBP17.58■□□□□ 0.4
CCS-206ENST00000530961 ARMCX2Q7L311 632 aa17.58■□□□□ 0.4
CCS-206ENST00000530961 CCDC148Q8NFR7 591 aa17.58■□□□□ 0.4
CCS-206ENST00000530961 MORC4Q8TE76 937 aa17.58■□□□□ 0.4
CCS-206ENST00000530961 WASF1Q92558 559 aa17.58■□□□□ 0.4
CCS-206ENST00000530961 PURBQ96QR8 312 aaKnown RBP17.58■□□□□ 0.4
CCS-206ENST00000530961 IWS1Q96ST2 819 aa17.58■□□□□ 0.4
CCS-206ENST00000530961 RMDN3Q96TC7 470 aa17.58■□□□□ 0.4
CCS-206ENST00000530961 HTATIP2Q9BUP3 242 aa17.58■□□□□ 0.4
CCS-206ENST00000530961 RIC8AQ9NPQ8 531 aa17.58■□□□□ 0.4
CCS-206ENST00000530961 ESYT2A0FGR8 921 aa17.57■□□□□ 0.4
CCS-206ENST00000530961 SMCO2A6NFE2 343 aa17.57■□□□□ 0.4
CCS-206ENST00000530961 MEIS2O14770 477 aa17.57■□□□□ 0.4
CCS-206ENST00000530961 SNAI1O95863 264 aaPredicted RBP17.57■□□□□ 0.4
CCS-206ENST00000530961 GNA11P29992 359 aa17.57■□□□□ 0.4
CCS-206ENST00000530961 HOXA13P31271 388 aaPredicted RBP17.57■□□□□ 0.4
CCS-206ENST00000530961 TRIM32Q13049 653 aa17.57■□□□□ 0.4
CCS-206ENST00000530961 TYW1BQ6NUM6 668 aa17.57■□□□□ 0.4
CCS-206ENST00000530961 NSUN7Q8NE18 718 aaKnown RBP17.57■□□□□ 0.4
CCS-206ENST00000530961 SMARCC2Q8TAQ2 1214 aa17.57■□□□□ 0.4
CCS-206ENST00000530961 TAAR1Q96RJ0 339 aa17.57■□□□□ 0.4
CCS-206ENST00000530961 ZMYND12Q9H0C1 365 aa17.57■□□□□ 0.4
CCS-206ENST00000530961 ABHD16BQ9H3Z7 469 aa17.57■□□□□ 0.4
CCS-206ENST00000530961 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.57■□□□□ 0.4
CCS-206ENST00000530961 COL20A1Q9P218 1284 aa17.57■□□□□ 0.4
CCS-206ENST00000530961 ORC3Q9UBD5 711 aaPredicted RBP17.57■□□□□ 0.4
CCS-206ENST00000530961 ASTN1O14525 1302 aa17.56■□□□□ 0.4
CCS-206ENST00000530961 CYBAP13498 195 aa17.56■□□□□ 0.4
CCS-206ENST00000530961 CCL5P13501 91 aa17.56■□□□□ 0.4
CCS-206ENST00000530961 CAPN2P17655 700 aa17.56■□□□□ 0.4
CCS-206ENST00000530961 XBP1P17861 261 aa17.56■□□□□ 0.4
CCS-206ENST00000530961 EDNRBP24530 442 aa17.56■□□□□ 0.4
CCS-206ENST00000530961 ADCY7P51828 1080 aa17.56■□□□□ 0.4
CCS-206ENST00000530961 MTFR1Q15390 333 aa17.56■□□□□ 0.4
CCS-206ENST00000530961 ARHGEF16Q5VV41 709 aa17.56■□□□□ 0.4
CCS-206ENST00000530961 USP17L6PQ6QN14 398 aa17.56■□□□□ 0.4
CCS-206ENST00000530961 FCHSD1Q86WN1 690 aa17.56■□□□□ 0.4
CCS-206ENST00000530961 CCDC83Q8IWF9 413 aa17.56■□□□□ 0.4
CCS-206ENST00000530961 TMX3Q96JJ7 454 aa17.56■□□□□ 0.4
CCS-206ENST00000530961 RNF208Q9H0X6 261 aa17.56■□□□□ 0.4
CCS-206ENST00000530961 C6orf50Q9HD87 102 aa17.56■□□□□ 0.4
CCS-206ENST00000530961 MSCO60682 206 aa17.55■□□□□ 0.4
CCS-206ENST00000530961 FOSP01100 380 aaPredicted RBP17.55■□□□□ 0.4
CCS-206ENST00000530961 HMGN5P82970 282 aaKnown RBP17.55■□□□□ 0.4
CCS-206ENST00000530961 PDE4DQ08499 809 aa17.55■□□□□ 0.4
CCS-206ENST00000530961 ST3GAL1Q11201 340 aa17.55■□□□□ 0.4
CCS-206ENST00000530961 ACVR2BQ13705 512 aa17.55■□□□□ 0.4
CCS-206ENST00000530961 MCTP2Q6DN12 878 aa17.55■□□□□ 0.4
CCS-206ENST00000530961 BICD2Q8TD16 824 aa17.55■□□□□ 0.4
CCS-206ENST00000530961 UNC93B1Q9H1C4 597 aa17.55■□□□□ 0.4
CCS-206ENST00000530961 PAK6Q9NQU5 681 aaPredicted RBP17.55■□□□□ 0.4
CCS-206ENST00000530961 PXMP2Q9NR77 195 aa17.55■□□□□ 0.4
CCS-206ENST00000530961 SPDYE3A6NKU9 549 aa17.54■□□□□ 0.4
CCS-206ENST00000530961 SEPT4O43236 478 aa17.54■□□□□ 0.4
CCS-206ENST00000530961 CD2BP2O95400 341 aaKnown RBP17.54■□□□□ 0.4
CCS-206ENST00000530961 MYCP01106 439 aaPredicted RBP17.54■□□□□ 0.4
CCS-206ENST00000530961 GJB1P08034 283 aa17.54■□□□□ 0.4
CCS-206ENST00000530961 ZNF865P0CJ78 1059 aaPredicted RBP17.54■□□□□ 0.4
CCS-206ENST00000530961 STXBP2Q15833 593 aa17.54■□□□□ 0.4
CCS-206ENST00000530961 PRAMEF19Q5SWL8 479 aa17.54■□□□□ 0.4
CCS-206ENST00000530961 GALNT17Q6IS24 598 aa17.54■□□□□ 0.4
CCS-206ENST00000530961 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.54■□□□□ 0.4
CCS-206ENST00000530961 VTA1Q9NP79 307 aa17.54■□□□□ 0.4
CCS-206ENST00000530961 VPS54Q9P1Q0 977 aa17.54■□□□□ 0.4
CCS-206ENST00000530961 LAMA3Q16787 3333 aa17.54■□□□□ 0.4
CCS-206ENST00000530961 NR3C2P08235 984 aa17.53■□□□□ 0.4
CCS-206ENST00000530961 FDPSP14324 419 aaKnown RBP17.53■□□□□ 0.4
CCS-206ENST00000530961 CNGA1P29973 690 aa17.53■□□□□ 0.4
CCS-206ENST00000530961 CCND3P30281 292 aaPredicted RBP17.53■□□□□ 0.4
CCS-206ENST00000530961 NLRP5P59047 1200 aa17.53■□□□□ 0.4
CCS-206ENST00000530961 AP3B2Q13367 1082 aa17.53■□□□□ 0.4
CCS-206ENST00000530961 TRPV1Q8NER1 839 aa17.53■□□□□ 0.4
CCS-206ENST00000530961 PDCD2LQ9BRP1 358 aa17.53■□□□□ 0.4
CCS-206ENST00000530961 KATNBL1Q9H079 304 aa17.53■□□□□ 0.4
CCS-206ENST00000530961 EHMT1Q9H9B1 1298 aa17.53■□□□□ 0.4
CCS-206ENST00000530961 PARP14Q460N5 1801 aa17.52■□□□□ 0.4
CCS-206ENST00000530961 JAK2O60674 1132 aa17.52■□□□□ 0.4
CCS-206ENST00000530961 EIF3JO75822 258 aaKnown RBP17.52■□□□□ 0.4
CCS-206ENST00000530961 AKR1A1P14550 325 aa17.52■□□□□ 0.4
CCS-206ENST00000530961 EIF2AK2P19525 551 aaKnown RBP17.52■□□□□ 0.4
CCS-206ENST00000530961 UBE2SQ16763 222 aa17.52■□□□□ 0.4
CCS-206ENST00000530961 XRRA1Q6P2D8 792 aa17.52■□□□□ 0.4
CCS-206ENST00000530961 VSIG10LQ86VR7 867 aa17.52■□□□□ 0.4
CCS-206ENST00000530961 SNX21Q969T3 373 aa17.52■□□□□ 0.4
CCS-206ENST00000530961 DEFB118Q96PH6 123 aa17.52■□□□□ 0.4
CCS-206ENST00000530961 ALG1Q9BT22 464 aa17.52■□□□□ 0.4
CCS-206ENST00000530961 DDX20Q9UHI6 824 aaKnown RBP17.52■□□□□ 0.4
CCS-206ENST00000530961 ZHX1Q9UKY1 873 aaPredicted RBP17.52■□□□□ 0.4
CCS-206ENST00000530961 FAM184BQ9ULE4 1060 aa17.52■□□□□ 0.4
CCS-206ENST00000530961 PCDHA6Q9UN73 950 aa17.52■□□□□ 0.4
CCS-206ENST00000530961 PCDHA8Q9Y5H6 950 aa17.52■□□□□ 0.4
CCS-206ENST00000530961 ZNF236Q9UL36 1845 aa17.51■□□□□ 0.39
CCS-206ENST00000530961 FRMPD4Q14CM0 1322 aa17.51■□□□□ 0.39
CCS-206ENST00000530961 STAM2O75886 525 aa17.51■□□□□ 0.39
CCS-206ENST00000530961 SGPL1O95470 568 aa17.51■□□□□ 0.39
CCS-206ENST00000530961 CCND2P30279 289 aa17.51■□□□□ 0.39
CCS-206ENST00000530961 PLA2G5P39877 138 aa17.51■□□□□ 0.39
CCS-206ENST00000530961 CLK2P49760 499 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms