RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 AGXT2Q9BYV1 514 aa21.64■■□□□ 1.06
GMDS-208ENST00000530927 PXMP2Q9NR77 195 aa21.64■■□□□ 1.06
GMDS-208ENST00000530927 ARIH2O95376 493 aa21.63■■□□□ 1.05
GMDS-208ENST00000530927 METAP2P50579 478 aaKnown RBP eCLIP21.63■■□□□ 1.05
GMDS-208ENST00000530927 KCNA10Q16322 511 aa21.63■■□□□ 1.05
GMDS-208ENST00000530927 ARHGEF16Q5VV41 709 aa21.63■■□□□ 1.05
GMDS-208ENST00000530927 CCSAPQ6IQ19 270 aaPredicted RBP21.63■■□□□ 1.05
GMDS-208ENST00000530927 TLK2Q86UE8 772 aa21.63■■□□□ 1.05
GMDS-208ENST00000530927 NSUN6Q8TEA1 469 aaKnown RBP21.63■■□□□ 1.05
GMDS-208ENST00000530927 COPS5Q92905 334 aa21.63■■□□□ 1.05
GMDS-208ENST00000530927 UPF3AQ9H1J1 476 aaKnown RBP21.63■■□□□ 1.05
GMDS-208ENST00000530927 RBM28Q9NW13 759 aaKnown RBP21.63■■□□□ 1.05
GMDS-208ENST00000530927 ZMYND8Q9ULU4 1186 aaPredicted RBP21.63■■□□□ 1.05
GMDS-208ENST00000530927 A0A1W2PQ45 241 aaPredicted RBP21.63■■□□□ 1.05
GMDS-208ENST00000530927 A0A1W2PQY0 241 aa21.63■■□□□ 1.05
GMDS-208ENST00000530927 GCOM1H8Y6P7 765 aaPredicted RBP21.63■■□□□ 1.05
GMDS-208ENST00000530927 DYNC1LI2O43237 492 aaPredicted RBP21.63■■□□□ 1.05
GMDS-208ENST00000530927 POLR2MP0CAP2 368 aa21.63■■□□□ 1.05
GMDS-208ENST00000530927 SYN1P17600 705 aa21.63■■□□□ 1.05
GMDS-208ENST00000530927 GJA9P57773 515 aa21.63■■□□□ 1.05
GMDS-208ENST00000530927 USP17L6PQ6QN14 398 aa21.63■■□□□ 1.05
GMDS-208ENST00000530927 WDR11Q9BZH6 1224 aa21.63■■□□□ 1.05
GMDS-208ENST00000530927 NCOA5Q9HCD5 579 aaKnown RBP21.63■■□□□ 1.05
GMDS-208ENST00000530927 PHF24Q9UPV7 400 aa21.63■■□□□ 1.05
GMDS-208ENST00000530927 CYP46A1Q9Y6A2 500 aa21.63■■□□□ 1.05
GMDS-208ENST00000530927 C8orf34Q49A92 452 aa21.62■■□□□ 1.05
GMDS-208ENST00000530927 WWC2Q6AWC2 1192 aa21.62■■□□□ 1.05
GMDS-208ENST00000530927 IQSEC1Q6DN90 963 aa21.62■■□□□ 1.05
GMDS-208ENST00000530927 TYW1BQ6NUM6 668 aa21.62■■□□□ 1.05
GMDS-208ENST00000530927 SLC39A5Q6ZMH5 540 aa21.62■■□□□ 1.05
GMDS-208ENST00000530927 HEATR3Q7Z4Q2 680 aa21.62■■□□□ 1.05
GMDS-208ENST00000530927 V9GY48 417 aaPredicted RBP21.62■■□□□ 1.05
GMDS-208ENST00000530927 LOC102724159A0A0B4J2E5 919 aa21.61■■□□□ 1.05
GMDS-208ENST00000530927 RBM47A0AV96 593 aaKnown RBP21.61■■□□□ 1.05
GMDS-208ENST00000530927 MYCLP12524 364 aaPredicted RBP21.61■■□□□ 1.05
GMDS-208ENST00000530927 ACLYP53396 1101 aa21.61■■□□□ 1.05
GMDS-208ENST00000530927 RTP1P59025 263 aa21.61■■□□□ 1.05
GMDS-208ENST00000530927 CCT2P78371 535 aaKnown RBP21.61■■□□□ 1.05
GMDS-208ENST00000530927 PWP2Q15269 919 aaKnown RBP21.61■■□□□ 1.05
GMDS-208ENST00000530927 SEPT14Q6ZU15 432 aa21.61■■□□□ 1.05
GMDS-208ENST00000530927 FBXL16Q8N461 479 aa21.61■■□□□ 1.05
GMDS-208ENST00000530927 PDCD2LQ9BRP1 358 aa21.61■■□□□ 1.05
GMDS-208ENST00000530927 TM6SF1Q9BZW5 370 aa21.61■■□□□ 1.05
GMDS-208ENST00000530927 RANBP2P49792 3224 aaKnown RBP21.6■■□□□ 1.05
GMDS-208ENST00000530927 MEIS2O14770 477 aa21.6■■□□□ 1.05
GMDS-208ENST00000530927 ASGR1P07306 291 aa21.6■■□□□ 1.05
GMDS-208ENST00000530927 NR3C2P08235 984 aa21.6■■□□□ 1.05
GMDS-208ENST00000530927 PDIA3P30101 505 aaKnown RBP21.6■■□□□ 1.05
GMDS-208ENST00000530927 UBE2SQ16763 222 aa21.6■■□□□ 1.05
GMDS-208ENST00000530927 TRIM60Q495X7 471 aa21.6■■□□□ 1.05
GMDS-208ENST00000530927 DUSP28Q4G0W2 176 aa21.6■■□□□ 1.05
GMDS-208ENST00000530927 GNASQ5JWF2 1037 aa21.6■■□□□ 1.05
GMDS-208ENST00000530927 ATP11BQ9Y2G3 1177 aa21.6■■□□□ 1.05
GMDS-208ENST00000530927 CEP290O15078 2479 aa21.59■■□□□ 1.05
GMDS-208ENST00000530927 DTNBO60941 627 aa21.59■■□□□ 1.05
GMDS-208ENST00000530927 CST5P28325 142 aaPredicted RBP21.59■■□□□ 1.05
GMDS-208ENST00000530927 PGM5Q15124 567 aa21.59■■□□□ 1.05
GMDS-208ENST00000530927 PHKBQ93100 1093 aa21.59■■□□□ 1.05
GMDS-208ENST00000530927 MAF1Q9H063 256 aa21.59■■□□□ 1.05
GMDS-208ENST00000530927 PDRG1Q9NUG6 133 aa21.59■■□□□ 1.05
GMDS-208ENST00000530927 NID2Q14112 1375 aa21.59■■□□□ 1.05
GMDS-208ENST00000530927 KIAA1217Q5T5P2 1943 aa21.58■■□□□ 1.05
GMDS-208ENST00000530927 RGS20O76081 388 aa21.58■■□□□ 1.05
GMDS-208ENST00000530927 RCAN1P53805 252 aa21.58■■□□□ 1.05
GMDS-208ENST00000530927 TRAF1Q13077 416 aa21.58■■□□□ 1.05
GMDS-208ENST00000530927 PPP2R5BQ15173 497 aa21.58■■□□□ 1.05
GMDS-208ENST00000530927 STXBP2Q15833 593 aa21.58■■□□□ 1.05
GMDS-208ENST00000530927 FSCN1Q16658 493 aaKnown RBP21.58■■□□□ 1.05
GMDS-208ENST00000530927 LY6KQ17RY6 165 aa21.58■■□□□ 1.05
GMDS-208ENST00000530927 IWS1Q96ST2 819 aa21.58■■□□□ 1.05
GMDS-208ENST00000530927 MPHOSPH6Q99547 160 aaKnown RBP21.58■■□□□ 1.05
GMDS-208ENST00000530927 AP5M1Q9H0R1 490 aa21.58■■□□□ 1.05
GMDS-208ENST00000530927 NR2E3Q9Y5X4 410 aa21.58■■□□□ 1.05
GMDS-208ENST00000530927 ADAMTS3O15072 1205 aa21.57■■□□□ 1.04
GMDS-208ENST00000530927 SORBS3O60504 671 aa21.57■■□□□ 1.04
GMDS-208ENST00000530927 TXNP10599 105 aaKnown RBP21.57■■□□□ 1.04
GMDS-208ENST00000530927 EVCP57679 992 aa21.57■■□□□ 1.04
GMDS-208ENST00000530927 STK3Q13188 491 aa21.57■■□□□ 1.04
GMDS-208ENST00000530927 CCDC62Q6P9F0 684 aa21.57■■□□□ 1.04
GMDS-208ENST00000530927 CXCL17Q6UXB2 119 aa21.57■■□□□ 1.04
GMDS-208ENST00000530927 OR6J1Q8NGC5 347 aa21.57■■□□□ 1.04
GMDS-208ENST00000530927 SCFD2Q8WU76 684 aa21.57■■□□□ 1.04
GMDS-208ENST00000530927 TSEN34Q9BSV6 310 aaKnown RBP21.57■■□□□ 1.04
GMDS-208ENST00000530927 PSTPIP2Q9H939 334 aa21.57■■□□□ 1.04
GMDS-208ENST00000530927 SPC25Q9HBM1 224 aa21.57■■□□□ 1.04
GMDS-208ENST00000530927 MAP3K20Q9NYL2 800 aaKnown RBP21.57■■□□□ 1.04
GMDS-208ENST00000530927 STXBP3O00186 592 aa21.56■■□□□ 1.04
GMDS-208ENST00000530927 NKX3-2P78367 333 aa21.56■■□□□ 1.04
GMDS-208ENST00000530927 SNX17Q15036 470 aa21.56■■□□□ 1.04
GMDS-208ENST00000530927 NTRK3Q16288 839 aa21.56■■□□□ 1.04
GMDS-208ENST00000530927 SMARCC2Q8TAQ2 1214 aa21.56■■□□□ 1.04
GMDS-208ENST00000530927 PPP1R13LQ8WUF5 828 aa21.56■■□□□ 1.04
GMDS-208ENST00000530927 STARD7Q9NQZ5 370 aa21.56■■□□□ 1.04
GMDS-208ENST00000530927 MOXD2PA6NHM9 499 aa21.55■■□□□ 1.04
GMDS-208ENST00000530927 B4DLN1 442 aa21.55■■□□□ 1.04
GMDS-208ENST00000530927 MRPL12P52815 198 aaKnown RBP21.55■■□□□ 1.04
GMDS-208ENST00000530927 MRPS9P82933 396 aaKnown RBP21.55■■□□□ 1.04
GMDS-208ENST00000530927 CHRDL2Q6WN34 429 aa21.55■■□□□ 1.04
GMDS-208ENST00000530927 VSIG10LQ86VR7 867 aa21.55■■□□□ 1.04
GMDS-208ENST00000530927 SAMD3Q8N6K7 520 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms