RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 FERMT2Q96AC1 680 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 GOLPH3LQ9H4A5 285 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 QTRT2Q9H974 415 aaKnown RBP6.37□□□□□ -1.39
PCF11-205ENST00000530906 FAM13BQ9NYF5 915 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 MKRN1Q9UHC7 482 aaKnown RBP6.37□□□□□ -1.39
PCF11-205ENST00000530906 CLIC4Q9Y696 253 aa6.37□□□□□ -1.39
PCF11-205ENST00000530906 FOCADQ5VW36 1801 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 QSER1Q2KHR3 1735 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 GAKO14976 1311 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 GPR75-ASB3A0A0A6YYF3 556 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 A0A1W2PNR3 127 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 TRIM75PA6NK02 468 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 TSPY2A6NKD2 308 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 hCG_1984214I3L0E3 225 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 FURINP09958 794 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 MAPTP10636 758 aaKnown RBP6.36□□□□□ -1.39
PCF11-205ENST00000530906 PFKFB1P16118 471 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 HSPA1LP34931 641 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 KRT2P35908 639 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 ZNF75DP51815 510 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 NDUFA8P51970 172 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 KCNQ4P56696 695 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 GSDMDP57764 484 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 NLRP12P59046 1061 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 DYNLL1P63167 89 aaKnown RBP6.36□□□□□ -1.39
PCF11-205ENST00000530906 CHAF1AQ13111 956 aaPredicted RBP6.36□□□□□ -1.39
PCF11-205ENST00000530906 IQCB1Q15051 598 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 ZNF772Q68DY9 489 aaPredicted RBP6.36□□□□□ -1.39
PCF11-205ENST00000530906 PTF1AQ7RTS3 328 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 CD163Q86VB7 1156 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 FCHSD1Q86WN1 690 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 PLA2G4DQ86XP0 818 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 ZNF713Q8N859 430 aaPredicted RBP6.36□□□□□ -1.39
PCF11-205ENST00000530906 CCDC148Q8NFR7 591 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 PIBF1Q8WXW3 757 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 PHF20Q9BVI0 1012 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 TRIM5Q9C035 493 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 FTOQ9C0B1 505 aaKnown RBP eCLIP6.36□□□□□ -1.39
PCF11-205ENST00000530906 COA1Q9GZY4 146 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 TMX4Q9H1E5 349 aaPredicted RBP6.36□□□□□ -1.39
PCF11-205ENST00000530906 MCM9Q9NXL9 1143 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 AATFQ9NY61 560 aaKnown RBP eCLIP6.36□□□□□ -1.39
PCF11-205ENST00000530906 IMPACTQ9P2X3 320 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 TUBE1Q9UJT0 475 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 SRPRBQ9Y5M8 271 aaKnown RBP6.36□□□□□ -1.39
PCF11-205ENST00000530906 TACC3Q9Y6A5 838 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 USP3Q9Y6I4 520 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 BRWD3Q6RI45 1802 aa6.36□□□□□ -1.39
PCF11-205ENST00000530906 PLIN4Q96Q06 1357 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 C1QTNF9BB2RNN3 333 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 POLRMTO00411 1230 aaKnown RBP6.35□□□□□ -1.39
PCF11-205ENST00000530906 PIK3R2O00459 728 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 CDK2AP1O14519 115 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 NRDCO43847 1150 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 UFL1O94874 794 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 SCG2P13521 617 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 NPR1P16066 1061 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 CD33P20138 364 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 ALDH1B1P30837 517 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 PDE6BP35913 854 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 USP5P45974 858 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 ORC2Q13416 577 aaPredicted RBP6.35□□□□□ -1.39
PCF11-205ENST00000530906 PFKFB3Q16875 520 aaPredicted RBP6.35□□□□□ -1.39
PCF11-205ENST00000530906 OTUD7BQ6GQQ9 843 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 LUZP1Q86V48 1076 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 DAGLBQ8NCG7 672 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 CCDC12Q8WUD4 166 aaPredicted RBP6.35□□□□□ -1.39
PCF11-205ENST00000530906 NUP133Q8WUM0 1156 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 ZIC5Q96T25 663 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 MYL10Q9BUA6 226 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 GTPBP4Q9BZE4 634 aaKnown RBP6.35□□□□□ -1.39
PCF11-205ENST00000530906 DNAJC25Q9H1X3 360 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 KAT14Q9H8E8 782 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 CD209Q9NNX6 404 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 AVENQ9NQS1 362 aaPredicted RBP6.35□□□□□ -1.39
PCF11-205ENST00000530906 SPTLC3Q9NUV7 552 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 ZDHHC3Q9NYG2 299 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 TFCP2L1Q9NZI6 479 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 SERTAD1Q9UHV2 236 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 KCNH3Q9ULD8 1083 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 ATP6V0A2Q9Y487 856 aa6.35□□□□□ -1.39
PCF11-205ENST00000530906 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.35□□□□□ -1.39
PCF11-205ENST00000530906 CDK5RAP2Q96SN8 1893 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 A0A1B0GVL5 298 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 DCDC2BA2VCK2 349 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 A6NJY4 79 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 BTBD18B2RXH4 712 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 LAD1O00515 517 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 CBFA2T2O43439 604 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 DTNBO60941 627 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 WDHD1O75717 1129 aaPredicted RBP6.34□□□□□ -1.39
PCF11-205ENST00000530906 SMC2O95347 1197 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 RXRAP19793 462 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 KLRK1P26718 216 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 ADH6P28332 368 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 HOXA7P31268 230 aaPredicted RBP6.34□□□□□ -1.39
PCF11-205ENST00000530906 ABL2P42684 1182 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 KCNJ6P48051 423 aa6.34□□□□□ -1.39
PCF11-205ENST00000530906 FKBP1AP62942 108 aaKnown RBP6.34□□□□□ -1.39
PCF11-205ENST00000530906 GPSM2P81274 684 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms