RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 SULF1Q8IWU6 871 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 LARP4BQ92615 738 aaKnown RBP9.27□□□□□ -0.93
CTNND1-221ENST00000529873 KIAA1024Q9UPX6 916 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 TSPOAP1O95153 1857 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 EFCAB8A8MWE9 144 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 HOXA7P31268 230 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-221ENST00000529873 EXOC3L4Q17RC7 722 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 BSPRYQ5W0U4 402 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-221ENST00000529873 POMGNT1Q8WZA1 660 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 DHTKD1Q96HY7 919 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-221ENST00000529873 CABS1Q96KC9 395 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 FAM81BQ96LP2 452 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 RRAGDQ9NQL2 400 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-221ENST00000529873 WDR70Q9NW82 654 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 TRPC5Q9UL62 973 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-221ENST00000529873 PCDHB4Q9Y5E5 795 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 PCDHA1Q9Y5I3 950 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 TMEM94Q12767 1356 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 LRRIQ4A6NIV6 560 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 A6NJR5 290 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 GOLGA8CPA6NN73 597 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 BTBD18B2RXH4 712 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 ZNF658Q5TYW1 1059 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-221ENST00000529873 RFX6Q8HWS3 928 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 RNF10Q8N5U6 811 aaKnown RBP9.27□□□□□ -0.93
CTNND1-221ENST00000529873 HAUS4Q9H6D7 363 aa9.27□□□□□ -0.93
CTNND1-221ENST00000529873 PASKQ96RG2 1323 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 AFPP02771 609 aaKnown RBP9.26□□□□□ -0.93
CTNND1-221ENST00000529873 TCP1P17987 556 aaKnown RBP9.26□□□□□ -0.93
CTNND1-221ENST00000529873 BPIFB4P59827 614 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 RSPH3Q86UC2 560 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 DACT3Q96B18 629 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-221ENST00000529873 DESI2Q9BSY9 194 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 PLEKHA4Q9H4M7 779 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 FANCLQ9NW38 375 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 SH2B2O14492 632 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-221ENST00000529873 NSFP46459 744 aaKnown RBP9.26□□□□□ -0.93
CTNND1-221ENST00000529873 IGBP1P78318 339 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 PROSER3Q2NL68 480 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 PPP1R2P3Q6NXS1 205 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 RETREG2Q8NC44 543 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 OSBPL3Q9H4L5 887 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 STK17AQ9UEE5 414 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 FAN1Q9Y2M0 1017 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 THAP12O43422 761 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 XPOTO43592 962 aaKnown RBP9.26□□□□□ -0.93
CTNND1-221ENST00000529873 DYNLL1P63167 89 aaKnown RBP9.26□□□□□ -0.93
CTNND1-221ENST00000529873 BFSP1Q12934 665 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 KCTD1Q719H9 257 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 CTAGE3PQ8IX95 158 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 ATP6V0A1Q93050 837 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 SCYL1Q96KG9 808 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 HAUS8Q9BT25 410 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 ZC4H2Q9NQZ6 224 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 GCFC2P16383 781 aaKnown RBP9.26□□□□□ -0.93
CTNND1-221ENST00000529873 SYDE2Q5VT97 1194 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 PPM1KQ8N3J5 372 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 RNF169Q8NCN4 708 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 JPH2Q9BR39 696 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-221ENST00000529873 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.26□□□□□ -0.93
CTNND1-221ENST00000529873 POLR3EQ9NVU0 708 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 LARSQ9P2J5 1176 aaKnown RBP9.26□□□□□ -0.93
CTNND1-221ENST00000529873 DBNLQ9UJU6 430 aaKnown RBP9.26□□□□□ -0.93
CTNND1-221ENST00000529873 FAM170AA1A519 330 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 ERVV-1B6SEH8 477 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 CHD1O14646 1710 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 ZBTB24O43167 697 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-221ENST00000529873 CCNA1P78396 465 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 ANKRD20A3Q5VUR7 823 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 EIF2AQ9BY44 585 aaKnown RBP9.26□□□□□ -0.93
CTNND1-221ENST00000529873 SUGCTQ9HAC7 445 aa9.26□□□□□ -0.93
CTNND1-221ENST00000529873 CFAP65Q6ZU64 1925 aaKnown RBP9.25□□□□□ -0.93
CTNND1-221ENST00000529873 NCAPD2Q15021 1401 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 MMP1P03956 469 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 MYL1P05976 194 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 LMNB2Q03252 620 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 KCTD2Q14681 263 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 SLC39A14Q15043 492 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 ZNF827Q17R98 1081 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 SPATS2Q86XZ4 545 aaKnown RBP9.25□□□□□ -0.93
CTNND1-221ENST00000529873 NME8Q8N427 588 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 PPP1R13BQ96KQ4 1090 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 GSDMAQ96QA5 445 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 SERPINB2P05120 415 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 RFX1P22670 979 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 GNGT1P63211 74 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 APBA1Q02410 837 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 PTK2Q05397 1052 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 GPR162Q16538 588 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 PHLDB3Q6NSJ2 640 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 NT5C1BQ96P26 610 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 RABEP2Q9H5N1 569 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 TMEM206Q9H813 350 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 KMT5AQ9NQR1 393 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 LAMC1P11047 1609 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 HEG1Q9ULI3 1381 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 S100BP04271 92 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-221ENST00000529873 SRGAP2BP0DMP2 458 aa9.25□□□□□ -0.93
CTNND1-221ENST00000529873 KRT3P12035 628 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms