RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 POLR2MP0CAP2 368 aa18.62■□□□□ 0.57
TSPAN4-218ENST00000529566 PTGS1P23219 599 aa18.62■□□□□ 0.57
TSPAN4-218ENST00000529566 IRX5P78411 483 aaPredicted RBP18.62■□□□□ 0.57
TSPAN4-218ENST00000529566 TNFAIP2Q03169 654 aa18.62■□□□□ 0.57
TSPAN4-218ENST00000529566 PDE4DQ08499 809 aa18.62■□□□□ 0.57
TSPAN4-218ENST00000529566 NTRK3Q16288 839 aa18.62■□□□□ 0.57
TSPAN4-218ENST00000529566 NAP1L2Q9ULW6 460 aaPredicted RBP18.62■□□□□ 0.57
TSPAN4-218ENST00000529566 SYNRGQ9UMZ2 1314 aa18.62■□□□□ 0.57
TSPAN4-218ENST00000529566 CCDC196A0A1B0GTZ2 297 aa18.61■□□□□ 0.57
TSPAN4-218ENST00000529566 MYADML2A6NDP7 307 aa18.61■□□□□ 0.57
TSPAN4-218ENST00000529566 PIK3CDO00329 1044 aa18.61■□□□□ 0.57
TSPAN4-218ENST00000529566 MEIS2O14770 477 aa18.61■□□□□ 0.57
TSPAN4-218ENST00000529566 GJA9P57773 515 aa18.61■□□□□ 0.57
TSPAN4-218ENST00000529566 TYW1BQ6NUM6 668 aa18.61■□□□□ 0.57
TSPAN4-218ENST00000529566 ZNF274Q96GC6 653 aaPredicted RBP18.61■□□□□ 0.57
TSPAN4-218ENST00000529566 LARP6Q9BRS8 491 aaKnown RBP18.61■□□□□ 0.57
TSPAN4-218ENST00000529566 HTATIP2Q9BUP3 242 aa18.61■□□□□ 0.57
TSPAN4-218ENST00000529566 B4DLN1 442 aa18.6■□□□□ 0.57
TSPAN4-218ENST00000529566 NR3C2P08235 984 aa18.6■□□□□ 0.57
TSPAN4-218ENST00000529566 EIF2AK2P19525 551 aaKnown RBP18.6■□□□□ 0.57
TSPAN4-218ENST00000529566 CST5P28325 142 aaPredicted RBP18.6■□□□□ 0.57
TSPAN4-218ENST00000529566 MRPL12P52815 198 aaKnown RBP18.6■□□□□ 0.57
TSPAN4-218ENST00000529566 ARHGEF16Q5VV41 709 aa18.6■□□□□ 0.57
TSPAN4-218ENST00000529566 WWC2Q6AWC2 1192 aa18.6■□□□□ 0.57
TSPAN4-218ENST00000529566 USP17L6PQ6QN14 398 aa18.6■□□□□ 0.57
TSPAN4-218ENST00000529566 RNF180Q86T96 592 aa18.6■□□□□ 0.57
TSPAN4-218ENST00000529566 GPKOWQ92917 476 aaPredicted RBP eCLIP18.6■□□□□ 0.57
TSPAN4-218ENST00000529566 MPHOSPH6Q99547 160 aaKnown RBP18.6■□□□□ 0.57
TSPAN4-218ENST00000529566 PDCD2LQ9BRP1 358 aa18.6■□□□□ 0.57
TSPAN4-218ENST00000529566 SENP6Q9GZR1 1112 aaPredicted RBP18.6■□□□□ 0.57
TSPAN4-218ENST00000529566 NCOA5Q9HCD5 579 aaKnown RBP18.6■□□□□ 0.57
TSPAN4-218ENST00000529566 PHF24Q9UPV7 400 aa18.6■□□□□ 0.57
TSPAN4-218ENST00000529566 FRMPD4Q14CM0 1322 aa18.59■□□□□ 0.57
TSPAN4-218ENST00000529566 KBTBD13C9JR72 458 aa18.59■□□□□ 0.57
TSPAN4-218ENST00000529566 CCT2P78371 535 aaKnown RBP18.59■□□□□ 0.57
TSPAN4-218ENST00000529566 DUSP28Q4G0W2 176 aa18.59■□□□□ 0.57
TSPAN4-218ENST00000529566 HEATR3Q7Z4Q2 680 aa18.59■□□□□ 0.57
TSPAN4-218ENST00000529566 FCHSD1Q86WN1 690 aa18.59■□□□□ 0.57
TSPAN4-218ENST00000529566 IL31RAQ8NI17 732 aa18.59■□□□□ 0.57
TSPAN4-218ENST00000529566 TSEN34Q9BSV6 310 aaKnown RBP18.59■□□□□ 0.57
TSPAN4-218ENST00000529566 WDR11Q9BZH6 1224 aa18.59■□□□□ 0.57
TSPAN4-218ENST00000529566 PSTPIP2Q9H939 334 aa18.59■□□□□ 0.57
TSPAN4-218ENST00000529566 Q9Y3F1 56 aa18.59■□□□□ 0.57
TSPAN4-218ENST00000529566 ALPK3Q96L96 1907 aa18.59■□□□□ 0.57
TSPAN4-218ENST00000529566 STXBP3O00186 592 aa18.58■□□□□ 0.56
TSPAN4-218ENST00000529566 PRPF3O43395 683 aaKnown RBP18.58■□□□□ 0.56
TSPAN4-218ENST00000529566 RGS20O76081 388 aa18.58■□□□□ 0.56
TSPAN4-218ENST00000529566 MYCNP04198 464 aaPredicted RBP18.58■□□□□ 0.56
TSPAN4-218ENST00000529566 PGM5Q15124 567 aa18.58■□□□□ 0.56
TSPAN4-218ENST00000529566 STXBP2Q15833 593 aa18.58■□□□□ 0.56
TSPAN4-218ENST00000529566 KCNA10Q16322 511 aa18.58■□□□□ 0.56
TSPAN4-218ENST00000529566 PKN1Q16512 942 aa18.58■□□□□ 0.56
TSPAN4-218ENST00000529566 LRRC26Q2I0M4 334 aa18.58■□□□□ 0.56
TSPAN4-218ENST00000529566 CCDC62Q6P9F0 684 aa18.58■□□□□ 0.56
TSPAN4-218ENST00000529566 VSIG10LQ86VR7 867 aa18.58■□□□□ 0.56
TSPAN4-218ENST00000529566 DPF3Q92784 378 aa18.58■□□□□ 0.56
TSPAN4-218ENST00000529566 EIF3JO75822 258 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-218ENST00000529566 ARIH2O95376 493 aa18.57■□□□□ 0.56
TSPAN4-218ENST00000529566 IFNAR1P17181 557 aa18.57■□□□□ 0.56
TSPAN4-218ENST00000529566 PFKFB3Q16875 520 aaPredicted RBP18.57■□□□□ 0.56
TSPAN4-218ENST00000529566 NOL8Q76FK4 1167 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-218ENST00000529566 TLK2Q86UE8 772 aa18.57■□□□□ 0.56
TSPAN4-218ENST00000529566 SCFD2Q8WU76 684 aa18.57■□□□□ 0.56
TSPAN4-218ENST00000529566 PHKBQ93100 1093 aa18.57■□□□□ 0.56
TSPAN4-218ENST00000529566 KIF2CQ99661 725 aa18.57■□□□□ 0.56
TSPAN4-218ENST00000529566 BARHL2Q9NY43 387 aa18.57■□□□□ 0.56
TSPAN4-218ENST00000529566 TPCN1Q9ULQ1 816 aa18.57■□□□□ 0.56
TSPAN4-218ENST00000529566 hCG_1984214I3L0E3 225 aa18.56■□□□□ 0.56
TSPAN4-218ENST00000529566 DYNC1LI2O43237 492 aaPredicted RBP18.56■□□□□ 0.56
TSPAN4-218ENST00000529566 C6orf222P0C671 652 aaPredicted RBP18.56■□□□□ 0.56
TSPAN4-218ENST00000529566 ACLYP53396 1101 aa18.56■□□□□ 0.56
TSPAN4-218ENST00000529566 AK2P54819 239 aa18.56■□□□□ 0.56
TSPAN4-218ENST00000529566 SNX17Q15036 470 aa18.56■□□□□ 0.56
TSPAN4-218ENST00000529566 SLC39A5Q6ZMH5 540 aa18.56■□□□□ 0.56
TSPAN4-218ENST00000529566 ZNF713Q8N859 430 aaPredicted RBP18.56■□□□□ 0.56
TSPAN4-218ENST00000529566 FERMT2Q96AC1 680 aa18.56■□□□□ 0.56
TSPAN4-218ENST00000529566 GTF3C3Q9Y5Q9 886 aa18.56■□□□□ 0.56
TSPAN4-218ENST00000529566 A0A1W2PQ45 241 aaPredicted RBP18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 A0A1W2PQY0 241 aa18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 H0YGN5 161 aa18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 EVI5O60447 810 aa18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 PPFIA3O75145 1194 aa18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 MYCLP12524 364 aaPredicted RBP18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 SCG2P13521 617 aa18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 ATN1P54259 1190 aaPredicted RBP18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 MRPS9P82933 396 aaKnown RBP18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 BEX3Q00994 111 aa18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 GNASQ5JWF2 1037 aa18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 C1orf53Q5VUE5 145 aa18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 PPP1R18Q6NYC8 613 aa18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 SEPT14Q6ZU15 432 aa18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 SMARCC2Q8TAQ2 1214 aa18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 COPS5Q92905 334 aa18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 CUL5Q93034 780 aa18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 RNF26Q9BY78 433 aaPredicted RBP18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 AP5M1Q9H0R1 490 aa18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 SPC25Q9HBM1 224 aa18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 RIC8AQ9NPQ8 531 aa18.55■□□□□ 0.56
TSPAN4-218ENST00000529566 CEP290O15078 2479 aa18.54■□□□□ 0.56
TSPAN4-218ENST00000529566 MOXD2PA6NHM9 499 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms