RNA–Protein interactions for RNA: ENST00000529552.5

FGFR1-233, Transcript of fibroblast growth factor receptor 1, human

TSL 4

Gene FGFR1, Length 688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-233	ENST00000529552	THEG	Q9P2T0	379 aa		10.77	□□□□□ -0.69
FGFR1-233	ENST00000529552	SLC4A7	Q9Y6M7	1214 aa		10.77	□□□□□ -0.69
FGFR1-233	ENST00000529552	TANC1	Q9C0D5	1861 aa		10.76	□□□□□ -0.69
FGFR1-233	ENST00000529552	MYH6	P13533	1939 aa		10.76	□□□□□ -0.69
FGFR1-233	ENST00000529552	PFKM	P08237	780 aa		10.76	□□□□□ -0.69
FGFR1-233	ENST00000529552	IGFBP4	P22692	258 aa		10.76	□□□□□ -0.69
FGFR1-233	ENST00000529552	PSMC6	P62333	389 aa		10.76	□□□□□ -0.69
FGFR1-233	ENST00000529552	BAAT	Q14032	418 aa	Predicted RBP	10.76	□□□□□ -0.69
FGFR1-233	ENST00000529552	PPP2R5B	Q15173	497 aa		10.76	□□□□□ -0.69
FGFR1-233	ENST00000529552	DUSP28	Q4G0W2	176 aa		10.76	□□□□□ -0.69
FGFR1-233	ENST00000529552	RASGRP2	Q7LDG7	609 aa		10.76	□□□□□ -0.69
FGFR1-233	ENST00000529552	MORC4	Q8TE76	937 aa		10.76	□□□□□ -0.69
FGFR1-233	ENST00000529552	ATXN2L	Q8WWM7	1075 aa	Known RBP	10.76	□□□□□ -0.69
FGFR1-233	ENST00000529552	WDR11	Q9BZH6	1224 aa		10.76	□□□□□ -0.69
FGFR1-233	ENST00000529552	TRPV6	Q9H1D0	765 aa		10.76	□□□□□ -0.69
FGFR1-233	ENST00000529552	NKX2-4	Q9H2Z4	354 aa		10.76	□□□□□ -0.69
FGFR1-233	ENST00000529552	CXXC1	Q9P0U4	656 aa	Predicted RBP	10.76	□□□□□ -0.69
FGFR1-233	ENST00000529552	PCDHB15	Q9Y5E8	787 aa		10.76	□□□□□ -0.69
FGFR1-233	ENST00000529552	UMODL1	Q5DID0	1318 aa		10.76	□□□□□ -0.69
FGFR1-233	ENST00000529552	FRMPD2	Q68DX3	1309 aa	Predicted RBP	10.76	□□□□□ -0.69
FGFR1-233	ENST00000529552	SCN10A	Q9Y5Y9	1956 aa		10.76	□□□□□ -0.69
FGFR1-233	ENST00000529552	PRUNE2	Q8WUY3	3088 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	TNFRSF10A	O00220	468 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	NKRF	O15226	690 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	FOXP2	O15409	715 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	MYL3	P08590	195 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	ACTN1	P12814	892 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	HOXB3	P14651	431 aa	Predicted RBP	10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	CALML3	P27482	149 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	SLC16A2	P36021	539 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	PDE4D	Q08499	809 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	ALX1	Q15699	326 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	FAM47C	Q5HY64	1035 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	ANKRD45	Q5TZF3	282 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	PPP2R2D	Q66LE6	453 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	BTNL9	Q6UXG8	535 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	RNF207	Q6ZRF8	634 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	ZNF710	Q8N1W2	664 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	OR6J1	Q8NGC5	347 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	WNT8A	Q9H1J5	351 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	GPCPD1	Q9NPB8	672 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	INCENP	Q9NQS7	918 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	DDX49	Q9Y6V7	483 aa	Known RBP	10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	GRIN2D	O15399	1336 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	TNKS	O95271	1327 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	SCN5A	Q14524	2016 aa		10.75	□□□□□ -0.69
FGFR1-233	ENST00000529552	NFIB	O00712	420 aa		10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	KPNA6	O60684	536 aa		10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	PC	P11498	1178 aa	Known RBP	10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	ATP2A2	P16615	1042 aa	Known RBP	10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	PTGS1	P23219	599 aa		10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	NOV	P48745	357 aa		10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	MRPS5	P82675	430 aa	Known RBP	10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	PURA	Q00577	322 aa	Known RBP	10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	CCDC85B	Q15834	202 aa	Predicted RBP	10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	MCMDC2	Q4G0Z9	681 aa		10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	VPS53	Q5VIR6	699 aa		10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	TTBK2	Q6IQ55	1244 aa		10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	SLC30A10	Q6XR72	485 aa		10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	TICAM2	Q86XR7	235 aa		10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	SCFD2	Q8WU76	684 aa		10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	SCLY	Q96I15	445 aa		10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	PURB	Q96QR8	312 aa	Known RBP	10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	TMEM47	Q9BQJ4	181 aa		10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	MTG1	Q9BT17	334 aa	Predicted RBP	10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	TCP11L1	Q9NUJ3	509 aa		10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	NOD1	Q9Y239	953 aa		10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	PCDHA11	Q9Y5I1	949 aa		10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	ZMYM6	O95789	1325 aa		10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	WDR19	Q8NEZ3	1342 aa		10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	EYS	Q5T1H1	3165 aa		10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	LAMA4	Q16363	1823 aa		10.74	□□□□□ -0.69
FGFR1-233	ENST00000529552	FGA	P02671	866 aa		10.73	□□□□□ -0.69
FGFR1-233	ENST00000529552	FGR	P09769	529 aa		10.73	□□□□□ -0.69
FGFR1-233	ENST00000529552	PDHB	P11177	359 aa		10.73	□□□□□ -0.69
FGFR1-233	ENST00000529552	RFC2	P35250	354 aa		10.73	□□□□□ -0.69
FGFR1-233	ENST00000529552	MFAP1	P55081	439 aa	Known RBP	10.73	□□□□□ -0.69
FGFR1-233	ENST00000529552	MFSD6	Q6ZSS7	791 aa		10.73	□□□□□ -0.69
FGFR1-233	ENST00000529552	DEFB128	Q7Z7B8	93 aa		10.73	□□□□□ -0.69
FGFR1-233	ENST00000529552	RETREG2	Q8NC44	543 aa		10.73	□□□□□ -0.69
FGFR1-233	ENST00000529552	DNER	Q8NFT8	737 aa		10.73	□□□□□ -0.69
FGFR1-233	ENST00000529552	TTC14	Q96N46	770 aa		10.73	□□□□□ -0.69
FGFR1-233	ENST00000529552	ASB2	Q96Q27	587 aa		10.73	□□□□□ -0.69
FGFR1-233	ENST00000529552	RNF41	Q9H4P4	317 aa	Predicted RBP	10.73	□□□□□ -0.69
FGFR1-233	ENST00000529552	TRMT13	Q9NUP7	481 aa	Known RBP	10.73	□□□□□ -0.69
FGFR1-233	ENST00000529552	YBX2	Q9Y2T7	364 aa	Known RBP	10.73	□□□□□ -0.69
FGFR1-233	ENST00000529552	SALL3	Q9BXA9	1300 aa		10.73	□□□□□ -0.69
FGFR1-233	ENST00000529552	KIAA1217	Q5T5P2	1943 aa		10.72	□□□□□ -0.69
FGFR1-233	ENST00000529552	CDH23	Q9H251	3354 aa		10.72	□□□□□ -0.69
FGFR1-233	ENST00000529552		A0A0D9SFI3	127 aa		10.72	□□□□□ -0.69
FGFR1-233	ENST00000529552	RBM47	A0AV96	593 aa	Known RBP	10.72	□□□□□ -0.69
FGFR1-233	ENST00000529552	TRIM6-TRIM34	B2RNG4	842 aa		10.72	□□□□□ -0.69
FGFR1-233	ENST00000529552	TXN	P10599	105 aa	Known RBP	10.72	□□□□□ -0.69
FGFR1-233	ENST00000529552	CYP2C9	P11712	490 aa		10.72	□□□□□ -0.69
FGFR1-233	ENST00000529552	RABGGTB	P53611	331 aa		10.72	□□□□□ -0.69
FGFR1-233	ENST00000529552	PDE1A	P54750	535 aa		10.72	□□□□□ -0.69
FGFR1-233	ENST00000529552	HAND2	P61296	217 aa		10.72	□□□□□ -0.69
FGFR1-233	ENST00000529552	RPS6	P62753	249 aa	Known RBP	10.72	□□□□□ -0.69
FGFR1-233	ENST00000529552	PTPN11	Q06124	597 aa	Predicted RBP	10.72	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms