RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 TEX2Q8IWB9 1127 aa28.15■■■□□ 2.1
LDLRAD3-203ENST00000528989 SAMD3Q8N6K7 520 aa28.15■■■□□ 2.1
LDLRAD3-203ENST00000528989 RMDN3Q96TC7 470 aa28.15■■■□□ 2.1
LDLRAD3-203ENST00000528989 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.15■■■□□ 2.1
LDLRAD3-203ENST00000528989 TDP2O95551 362 aa28.15■■■□□ 2.1
LDLRAD3-203ENST00000528989 EIF2AK2P19525 551 aaKnown RBP28.15■■■□□ 2.1
LDLRAD3-203ENST00000528989 COPB2P35606 906 aa28.15■■■□□ 2.1
LDLRAD3-203ENST00000528989 NASPP49321 788 aaPredicted RBP28.15■■■□□ 2.1
LDLRAD3-203ENST00000528989 PTPAQ15257 358 aa28.15■■■□□ 2.1
LDLRAD3-203ENST00000528989 ATL3Q6DD88 541 aa28.15■■■□□ 2.1
LDLRAD3-203ENST00000528989 MCTP2Q6DN12 878 aa28.15■■■□□ 2.1
LDLRAD3-203ENST00000528989 REM2Q8IYK8 340 aaPredicted RBP28.15■■■□□ 2.1
LDLRAD3-203ENST00000528989 LINC00301Q8NCQ3 95 aa28.15■■■□□ 2.1
LDLRAD3-203ENST00000528989 IL31RAQ8NI17 732 aa28.15■■■□□ 2.1
LDLRAD3-203ENST00000528989 LEO1Q8WVC0 666 aaPredicted RBP28.15■■■□□ 2.1
LDLRAD3-203ENST00000528989 MMP19Q99542 508 aa28.15■■■□□ 2.1
LDLRAD3-203ENST00000528989 TRPA1O75762 1119 aa28.14■■■□□ 2.1
LDLRAD3-203ENST00000528989 TPRNQ4KMQ1 711 aa28.14■■■□□ 2.1
LDLRAD3-203ENST00000528989 SPATA32Q96LK8 384 aa28.14■■■□□ 2.1
LDLRAD3-203ENST00000528989 ASTN1O14525 1302 aa28.14■■■□□ 2.09
LDLRAD3-203ENST00000528989 FCER1AP12319 257 aa28.13■■■□□ 2.09
LDLRAD3-203ENST00000528989 KCTD2Q14681 263 aa28.13■■■□□ 2.09
LDLRAD3-203ENST00000528989 CYP2W1Q8TAV3 490 aa28.13■■■□□ 2.09
LDLRAD3-203ENST00000528989 MARCKSP29966 332 aaPredicted RBP28.12■■■□□ 2.09
LDLRAD3-203ENST00000528989 GPR142Q7Z601 462 aa28.12■■■□□ 2.09
LDLRAD3-203ENST00000528989 SCAND2PQ9GZW5 306 aaPredicted RBP28.12■■■□□ 2.09
LDLRAD3-203ENST00000528989 PXMP2Q9NR77 195 aa28.12■■■□□ 2.09
LDLRAD3-203ENST00000528989 RNF186Q9NXI6 227 aa28.12■■■□□ 2.09
LDLRAD3-203ENST00000528989 RCOR1Q9UKL0 485 aa28.12■■■□□ 2.09
LDLRAD3-203ENST00000528989 PFASO15067 1338 aa28.12■■■□□ 2.09
LDLRAD3-203ENST00000528989 RPTORQ8N122 1335 aa28.12■■■□□ 2.09
LDLRAD3-203ENST00000528989 PRPF40AO75400 957 aaKnown RBP28.12■■■□□ 2.09
LDLRAD3-203ENST00000528989 USP11P51784 963 aa28.12■■■□□ 2.09
LDLRAD3-203ENST00000528989 SLC39A14Q15043 492 aa28.12■■■□□ 2.09
LDLRAD3-203ENST00000528989 STK38Q15208 465 aa28.12■■■□□ 2.09
LDLRAD3-203ENST00000528989 ARHGEF16Q5VV41 709 aa28.12■■■□□ 2.09
LDLRAD3-203ENST00000528989 MYH15Q9Y2K3 1946 aa28.11■■■□□ 2.09
LDLRAD3-203ENST00000528989 FAM86B1E9PN63 330 aa28.11■■■□□ 2.09
LDLRAD3-203ENST00000528989 SLC37A4O43826 429 aa28.11■■■□□ 2.09
LDLRAD3-203ENST00000528989 FAM86B2P0C5J1 330 aa28.11■■■□□ 2.09
LDLRAD3-203ENST00000528989 MCM4P33991 863 aa28.11■■■□□ 2.09
LDLRAD3-203ENST00000528989 PTGDRQ13258 359 aa28.11■■■□□ 2.09
LDLRAD3-203ENST00000528989 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.11■■■□□ 2.09
LDLRAD3-203ENST00000528989 UIMC1Q96RL1 719 aa28.11■■■□□ 2.09
LDLRAD3-203ENST00000528989 TMEM60Q9H2L4 133 aa28.11■■■□□ 2.09
LDLRAD3-203ENST00000528989 POTEB2H3BUK9 544 aa28.1■■■□□ 2.09
LDLRAD3-203ENST00000528989 PGM5Q15124 567 aa28.1■■■□□ 2.09
LDLRAD3-203ENST00000528989 C4orf32Q8N8J7 132 aa28.1■■■□□ 2.09
LDLRAD3-203ENST00000528989 PDCD2LQ9BRP1 358 aa28.1■■■□□ 2.09
LDLRAD3-203ENST00000528989 MYH7BA7E2Y1 1941 aa28.1■■■□□ 2.09
LDLRAD3-203ENST00000528989 DNAJC25-GNG10A0A024R161 153 aa28.1■■■□□ 2.09
LDLRAD3-203ENST00000528989 SOWAHBA6NEL2 793 aa28.1■■■□□ 2.09
LDLRAD3-203ENST00000528989 FAM133AQ8N9E0 248 aa28.1■■■□□ 2.09
LDLRAD3-203ENST00000528989 SPTLC2O15270 562 aa28.09■■■□□ 2.09
LDLRAD3-203ENST00000528989 YEATS4O95619 227 aa28.09■■■□□ 2.09
LDLRAD3-203ENST00000528989 CYP3A4P08684 503 aa28.09■■■□□ 2.09
LDLRAD3-203ENST00000528989 ADORA2AP29274 412 aa28.09■■■□□ 2.09
LDLRAD3-203ENST00000528989 CTGFP29279 349 aa28.09■■■□□ 2.09
LDLRAD3-203ENST00000528989 MAPK4P31152 587 aa28.09■■■□□ 2.09
LDLRAD3-203ENST00000528989 POTEDQ86YR6 584 aa28.09■■■□□ 2.09
LDLRAD3-203ENST00000528989 NSUN6Q8TEA1 469 aaKnown RBP28.09■■■□□ 2.09
LDLRAD3-203ENST00000528989 IVNS1ABPQ9Y6Y0 642 aa28.09■■■□□ 2.09
LDLRAD3-203ENST00000528989 FRMPD4Q14CM0 1322 aa28.08■■■□□ 2.09
LDLRAD3-203ENST00000528989 COBLO75128 1261 aa28.08■■■□□ 2.09
LDLRAD3-203ENST00000528989 MYCLP12524 364 aaPredicted RBP28.08■■■□□ 2.09
LDLRAD3-203ENST00000528989 MRPS9P82933 396 aaKnown RBP28.08■■■□□ 2.09
LDLRAD3-203ENST00000528989 NFKBIBQ15653 356 aa28.08■■■□□ 2.09
LDLRAD3-203ENST00000528989 PPP4R3AQ6IN85 833 aa28.08■■■□□ 2.09
LDLRAD3-203ENST00000528989 PLEKHH3Q7Z736 793 aa28.08■■■□□ 2.09
LDLRAD3-203ENST00000528989 GJA10Q969M2 543 aa28.08■■■□□ 2.09
LDLRAD3-203ENST00000528989 MAF1Q9H063 256 aa28.08■■■□□ 2.09
LDLRAD3-203ENST00000528989 GADD45BO75293 160 aaPredicted RBP28.08■■■□□ 2.09
LDLRAD3-203ENST00000528989 PRR16Q569H4 304 aa28.08■■■□□ 2.09
LDLRAD3-203ENST00000528989 FGD4Q96M96 766 aa28.08■■■□□ 2.09
LDLRAD3-203ENST00000528989 EHMT1Q9H9B1 1298 aa28.08■■■□□ 2.09
LDLRAD3-203ENST00000528989 DDX25Q9UHL0 483 aaKnown RBP28.08■■■□□ 2.09
LDLRAD3-203ENST00000528989 RBBP6Q7Z6E9 1792 aaKnown RBP28.07■■■□□ 2.08
LDLRAD3-203ENST00000528989 STRNO43815 780 aa28.07■■■□□ 2.08
LDLRAD3-203ENST00000528989 NR3C2P08235 984 aa28.07■■■□□ 2.08
LDLRAD3-203ENST00000528989 PTPREP23469 700 aa28.07■■■□□ 2.08
LDLRAD3-203ENST00000528989 ZNF76P36508 570 aa28.07■■■□□ 2.08
LDLRAD3-203ENST00000528989 ARHGAP39Q9C0H5 1083 aa28.07■■■□□ 2.08
LDLRAD3-203ENST00000528989 LMBRD1Q9NUN5 540 aa28.07■■■□□ 2.08
LDLRAD3-203ENST00000528989 CYP3A7-CYP3A51PA0A087WV96 503 aa28.06■■■□□ 2.08
LDLRAD3-203ENST00000528989 NEMFO60524 1076 aa28.06■■■□□ 2.08
LDLRAD3-203ENST00000528989 CYP3A7P24462 503 aa28.06■■■□□ 2.08
LDLRAD3-203ENST00000528989 CIITAP33076 1130 aa28.06■■■□□ 2.08
LDLRAD3-203ENST00000528989 GRIN1Q05586 938 aa28.06■■■□□ 2.08
LDLRAD3-203ENST00000528989 PCNX4Q63HM2 1172 aa28.06■■■□□ 2.08
LDLRAD3-203ENST00000528989 LENG9Q96B70 501 aa28.06■■■□□ 2.08
LDLRAD3-203ENST00000528989 PCDHA7Q9UN72 937 aa28.06■■■□□ 2.08
LDLRAD3-203ENST00000528989 ITGB5P18084 799 aa28.06■■■□□ 2.08
LDLRAD3-203ENST00000528989 ME1P48163 572 aa28.06■■■□□ 2.08
LDLRAD3-203ENST00000528989 ALDH5A1P51649 535 aaPredicted RBP28.06■■■□□ 2.08
LDLRAD3-203ENST00000528989 ATP2C1P98194 919 aaPredicted RBP28.06■■■□□ 2.08
LDLRAD3-203ENST00000528989 GRB14Q14449 540 aa28.06■■■□□ 2.08
LDLRAD3-203ENST00000528989 DNERQ8NFT8 737 aa28.06■■■□□ 2.08
LDLRAD3-203ENST00000528989 CLIC6Q96NY7 704 aa28.06■■■□□ 2.08
LDLRAD3-203ENST00000528989 CEP131Q9UPN4 1083 aa28.06■■■□□ 2.08
LDLRAD3-203ENST00000528989 CENPFP49454 3210 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms