RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 ZBBXA8MT70 800 aa18.27■□□□□ 0.52
CTSB-215ENST00000528965 DHX16O60231 1041 aaKnown RBP18.27■□□□□ 0.52
CTSB-215ENST00000528965 TXNP10599 105 aaKnown RBP18.27■□□□□ 0.52
CTSB-215ENST00000528965 NFRKBQ6P4R8 1299 aa18.27■□□□□ 0.52
CTSB-215ENST00000528965 ZSCAN10Q96SZ4 725 aaPredicted RBP18.27■□□□□ 0.52
CTSB-215ENST00000528965 UBAC1Q9BSL1 405 aa18.27■□□□□ 0.52
CTSB-215ENST00000528965 CNNM2Q9H8M5 875 aa18.27■□□□□ 0.52
CTSB-215ENST00000528965 TRMT13Q9NUP7 481 aaKnown RBP18.27■□□□□ 0.52
CTSB-215ENST00000528965 CXXC1Q9P0U4 656 aaPredicted RBP18.27■□□□□ 0.52
CTSB-215ENST00000528965 SLC4A7Q9Y6M7 1214 aa18.27■□□□□ 0.52
CTSB-215ENST00000528965 PARP1P09874 1014 aaKnown RBP18.26■□□□□ 0.51
CTSB-215ENST00000528965 ACTN1P12814 892 aa18.26■□□□□ 0.51
CTSB-215ENST00000528965 RFC2P35250 354 aa18.26■□□□□ 0.51
CTSB-215ENST00000528965 PTPN11Q06124 597 aaPredicted RBP18.26■□□□□ 0.51
CTSB-215ENST00000528965 NSUN6Q8TEA1 469 aaKnown RBP18.26■□□□□ 0.51
CTSB-215ENST00000528965 ANKS1AQ92625 1134 aa18.26■□□□□ 0.51
CTSB-215ENST00000528965 UBA5Q9GZZ9 404 aa18.26■□□□□ 0.51
CTSB-215ENST00000528965 PRDM12Q9H4Q4 367 aa18.26■□□□□ 0.51
CTSB-215ENST00000528965 NOD1Q9Y239 953 aa18.26■□□□□ 0.51
CTSB-215ENST00000528965 A6NJR5 290 aa18.25■□□□□ 0.51
CTSB-215ENST00000528965 B4E1Z4 1266 aa18.25■□□□□ 0.51
CTSB-215ENST00000528965 NBPF20Q3BBV1 942 aa18.25■□□□□ 0.51
CTSB-215ENST00000528965 ADGRF4Q8IZF3 695 aa18.25■□□□□ 0.51
CTSB-215ENST00000528965 RETREG2Q8NC44 543 aa18.25■□□□□ 0.51
CTSB-215ENST00000528965 SCLYQ96I15 445 aa18.25■□□□□ 0.51
CTSB-215ENST00000528965 NKX2-4Q9H2Z4 354 aa18.25■□□□□ 0.51
CTSB-215ENST00000528965 MRPL11Q9Y3B7 192 aaKnown RBP18.25■□□□□ 0.51
CTSB-215ENST00000528965 PITPNM1O00562 1244 aa18.24■□□□□ 0.51
CTSB-215ENST00000528965 CYP2C9P11712 490 aa18.24■□□□□ 0.51
CTSB-215ENST00000528965 BFSP2Q13515 415 aa18.24■□□□□ 0.51
CTSB-215ENST00000528965 TJAP1Q5JTD0 557 aa18.24■□□□□ 0.51
CTSB-215ENST00000528965 PPP2R2DQ66LE6 453 aa18.24■□□□□ 0.51
CTSB-215ENST00000528965 FBXO11Q86XK2 927 aa18.24■□□□□ 0.51
CTSB-215ENST00000528965 CCDC155Q8N6L0 562 aa18.24■□□□□ 0.51
CTSB-215ENST00000528965 ENAHQ8N8S7 591 aaPredicted RBP18.24■□□□□ 0.51
CTSB-215ENST00000528965 IWS1Q96ST2 819 aa18.24■□□□□ 0.51
CTSB-215ENST00000528965 CPVLQ9H3G5 476 aa18.24■□□□□ 0.51
CTSB-215ENST00000528965 SCN10AQ9Y5Y9 1956 aa18.24■□□□□ 0.51
CTSB-215ENST00000528965 GH1P01241 217 aa18.23■□□□□ 0.51
CTSB-215ENST00000528965 ATP2A2P16615 1042 aaKnown RBP18.23■□□□□ 0.51
CTSB-215ENST00000528965 STXBP2Q15833 593 aa18.23■□□□□ 0.51
CTSB-215ENST00000528965 QRICH1Q2TAL8 776 aa18.23■□□□□ 0.51
CTSB-215ENST00000528965 IFIT1BQ5T764 474 aaKnown RBP18.23■□□□□ 0.51
CTSB-215ENST00000528965 USP38Q8NB14 1042 aa18.23■□□□□ 0.51
CTSB-215ENST00000528965 SYTL5Q8TDW5 730 aaPredicted RBP18.23■□□□□ 0.51
CTSB-215ENST00000528965 COPS5Q92905 334 aa18.23■□□□□ 0.51
CTSB-215ENST00000528965 RMDN3Q96TC7 470 aa18.23■□□□□ 0.51
CTSB-215ENST00000528965 PCDHA11Q9Y5I1 949 aa18.23■□□□□ 0.51
CTSB-215ENST00000528965 IGHDP01880 384 aa18.22■□□□□ 0.51
CTSB-215ENST00000528965 ARHGEF16Q5VV41 709 aa18.22■□□□□ 0.51
CTSB-215ENST00000528965 DEFB128Q7Z7B8 93 aa18.22■□□□□ 0.51
CTSB-215ENST00000528965 ZSWIM5Q9P217 1185 aa18.22■□□□□ 0.51
CTSB-215ENST00000528965 YBX2Q9Y2T7 364 aaKnown RBP18.22■□□□□ 0.51
CTSB-215ENST00000528965 EYSQ5T1H1 3165 aa18.22■□□□□ 0.51
CTSB-215ENST00000528965 ARIH2O95376 493 aa18.21■□□□□ 0.51
CTSB-215ENST00000528965 MMP3P08254 477 aa18.21■□□□□ 0.51
CTSB-215ENST00000528965 IGFBP4P22692 258 aa18.21■□□□□ 0.51
CTSB-215ENST00000528965 TRDNQ13061 729 aa18.21■□□□□ 0.51
CTSB-215ENST00000528965 TRAF1Q13077 416 aa18.21■□□□□ 0.51
CTSB-215ENST00000528965 CCDC62Q6P9F0 684 aa18.21■□□□□ 0.51
CTSB-215ENST00000528965 SEPT14Q6ZU15 432 aa18.21■□□□□ 0.51
CTSB-215ENST00000528965 CAGE1Q8TC20 777 aa18.21■□□□□ 0.51
CTSB-215ENST00000528965 PPM1EQ8WY54 764 aa18.21■□□□□ 0.51
CTSB-215ENST00000528965 SLC9A7Q96T83 725 aa18.21■□□□□ 0.51
CTSB-215ENST00000528965 AMNQ9BXJ7 453 aa18.21■□□□□ 0.51
CTSB-215ENST00000528965 THEGQ9P2T0 379 aa18.21■□□□□ 0.51
CTSB-215ENST00000528965 CASTP20810 708 aaKnown RBP18.2■□□□□ 0.5
CTSB-215ENST00000528965 CHMP4BP1P59074 171 aa18.2■□□□□ 0.5
CTSB-215ENST00000528965 EXOC6Q8TAG9 804 aa18.2■□□□□ 0.5
CTSB-215ENST00000528965 AFG1LQ8WV93 481 aa18.2■□□□□ 0.5
CTSB-215ENST00000528965 ATXN2LQ8WWM7 1075 aaKnown RBP18.2■□□□□ 0.5
CTSB-215ENST00000528965 TAAR1Q96RJ0 339 aa18.2■□□□□ 0.5
CTSB-215ENST00000528965 KATNAL1Q9BW62 490 aa18.2■□□□□ 0.5
CTSB-215ENST00000528965 FTOQ9C0B1 505 aaKnown RBP eCLIP18.2■□□□□ 0.53e-19■□□□□ 9.3
CTSB-215ENST00000528965 TSPYL2Q9H2G4 693 aaPredicted RBP18.2■□□□□ 0.5
CTSB-215ENST00000528965 JMJD4Q9H9V9 463 aa18.2■□□□□ 0.5
CTSB-215ENST00000528965 VAT1LQ9HCJ6 419 aa18.2■□□□□ 0.5
CTSB-215ENST00000528965 TANC1Q9C0D5 1861 aa18.2■□□□□ 0.5
CTSB-215ENST00000528965 TTC28Q96AY4 2481 aa18.2■□□□□ 0.5
CTSB-215ENST00000528965 EIF2AK2P19525 551 aaKnown RBP18.19■□□□□ 0.5
CTSB-215ENST00000528965 RABGGTBP53611 331 aa18.19■□□□□ 0.5
CTSB-215ENST00000528965 ARHGAP1Q07960 439 aa18.19■□□□□ 0.5
CTSB-215ENST00000528965 PTGISQ16647 500 aa18.19■□□□□ 0.5
CTSB-215ENST00000528965 DGKDQ16760 1214 aa18.19■□□□□ 0.5
CTSB-215ENST00000528965 TMEM67Q5HYA8 995 aa18.19■□□□□ 0.5
CTSB-215ENST00000528965 SESTD1Q86VW0 696 aa18.19■□□□□ 0.5
CTSB-215ENST00000528965 IL27Q8NEV9 243 aa18.19■□□□□ 0.5
CTSB-215ENST00000528965 PHOSPHO2Q8TCD6 241 aa18.19■□□□□ 0.5
CTSB-215ENST00000528965 AFAP1L1Q8TED9 768 aa18.19■□□□□ 0.5
CTSB-215ENST00000528965 MAP3K20Q9NYL2 800 aaKnown RBP18.19■□□□□ 0.5
CTSB-215ENST00000528965 COL20A1Q9P218 1284 aa18.19■□□□□ 0.5
CTSB-215ENST00000528965 ERICH2A1L162 156 aa18.18■□□□□ 0.5
CTSB-215ENST00000528965 EIF3JO75822 258 aaKnown RBP18.18■□□□□ 0.5
CTSB-215ENST00000528965 BAIAP3O94812 1187 aa18.18■□□□□ 0.5
CTSB-215ENST00000528965 CFBP00751 764 aa18.18■□□□□ 0.5
CTSB-215ENST00000528965 IQCF3P0C7M6 154 aa18.18■□□□□ 0.5
CTSB-215ENST00000528965 LY6KQ17RY6 165 aa18.18■□□□□ 0.5
CTSB-215ENST00000528965 CHST3Q7LGC8 479 aa18.18■□□□□ 0.5
CTSB-215ENST00000528965 SAMD3Q8N6K7 520 aa18.18■□□□□ 0.5
CTSB-215ENST00000528965 RUFY2Q8WXA3 655 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms