RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 CYP2C18P33260 490 aa10.14□□□□□ -0.79
SSBP3-212ENST00000528930 GABPAQ06546 454 aa10.14□□□□□ -0.79
SSBP3-212ENST00000528930 FAM126BQ8IXS8 530 aa10.14□□□□□ -0.79
SSBP3-212ENST00000528930 OSBP2Q969R2 916 aa10.14□□□□□ -0.79
SSBP3-212ENST00000528930 WDR18Q9BV38 432 aa10.14□□□□□ -0.79
SSBP3-212ENST00000528930 SLC6A16Q9GZN6 736 aa10.14□□□□□ -0.79
SSBP3-212ENST00000528930 RWDD1Q9H446 243 aaPredicted RBP10.14□□□□□ -0.79
SSBP3-212ENST00000528930 CWC22Q9HCG8 908 aaKnown RBP10.14□□□□□ -0.79
SSBP3-212ENST00000528930 GINM1Q9NU53 330 aa10.14□□□□□ -0.79
SSBP3-212ENST00000528930 MCM9Q9NXL9 1143 aa10.14□□□□□ -0.79
SSBP3-212ENST00000528930 SERPINB13Q9UIV8 391 aa10.14□□□□□ -0.79
SSBP3-212ENST00000528930 RNF113AO15541 343 aaKnown RBP10.13□□□□□ -0.79
SSBP3-212ENST00000528930 PGK1P00558 417 aa10.13□□□□□ -0.79
SSBP3-212ENST00000528930 POLR3DP05423 398 aaPredicted RBP10.13□□□□□ -0.79
SSBP3-212ENST00000528930 CYP2D6P10635 497 aa10.13□□□□□ -0.79
SSBP3-212ENST00000528930 SHMT1P34896 483 aa10.13□□□□□ -0.79
SSBP3-212ENST00000528930 ACLYP53396 1101 aa10.13□□□□□ -0.79
SSBP3-212ENST00000528930 CCNA1P78396 465 aa10.13□□□□□ -0.79
SSBP3-212ENST00000528930 PUM1Q14671 1186 aaKnown RBP eCLIP10.13□□□□□ -0.79
SSBP3-212ENST00000528930 SPRED2Q7Z698 418 aa10.13□□□□□ -0.79
SSBP3-212ENST00000528930 RNF135Q8IUD6 432 aa10.13□□□□□ -0.79
SSBP3-212ENST00000528930 NUP133Q8WUM0 1156 aa10.13□□□□□ -0.79
SSBP3-212ENST00000528930 STRBPQ96SI9 672 aaKnown RBP10.13□□□□□ -0.79
SSBP3-212ENST00000528930 ANP32EQ9BTT0 268 aa10.13□□□□□ -0.79
SSBP3-212ENST00000528930 TRIM34Q9BYJ4 488 aa10.13□□□□□ -0.79
SSBP3-212ENST00000528930 AAASQ9NRG9 546 aa10.13□□□□□ -0.79
SSBP3-212ENST00000528930 ATP8A2Q9NTI2 1148 aa10.13□□□□□ -0.79
SSBP3-212ENST00000528930 ZBTB21Q9ULJ3 1066 aa10.13□□□□□ -0.79
SSBP3-212ENST00000528930 FAM50BQ9Y247 325 aa10.13□□□□□ -0.79
SSBP3-212ENST00000528930 RABGAP1Q9Y3P9 1069 aa10.13□□□□□ -0.79
SSBP3-212ENST00000528930 PARP14Q460N5 1801 aa10.12□□□□□ -0.79
SSBP3-212ENST00000528930 TET1Q8NFU7 2136 aa10.12□□□□□ -0.79
SSBP3-212ENST00000528930 BAZ2AQ9UIF9 1905 aaKnown RBP10.12□□□□□ -0.79
SSBP3-212ENST00000528930 MOXD2PA6NHM9 499 aa10.12□□□□□ -0.79
SSBP3-212ENST00000528930 NR1I2O75469 434 aa10.12□□□□□ -0.79
SSBP3-212ENST00000528930 GH2P01242 217 aa10.12□□□□□ -0.79
SSBP3-212ENST00000528930 ZFYP08048 801 aaPredicted RBP10.12□□□□□ -0.79
SSBP3-212ENST00000528930 RARBP10826 455 aa10.12□□□□□ -0.79
SSBP3-212ENST00000528930 AVPR2P30518 371 aa10.12□□□□□ -0.79
SSBP3-212ENST00000528930 PDE1AP54750 535 aa10.12□□□□□ -0.79
SSBP3-212ENST00000528930 BACE1P56817 501 aa10.12□□□□□ -0.79
SSBP3-212ENST00000528930 MTMR2Q13614 643 aa10.12□□□□□ -0.79
SSBP3-212ENST00000528930 CERKLQ49MI3 558 aaPredicted RBP10.12□□□□□ -0.79
SSBP3-212ENST00000528930 PRAMEF19Q5SWL8 479 aa10.12□□□□□ -0.79
SSBP3-212ENST00000528930 C12orf60Q5U649 245 aa10.12□□□□□ -0.79
SSBP3-212ENST00000528930 SCUBE3Q8IX30 993 aa10.12□□□□□ -0.79
SSBP3-212ENST00000528930 GDPD5Q8WTR4 605 aa10.12□□□□□ -0.79
SSBP3-212ENST00000528930 APPBP2Q92624 585 aa10.12□□□□□ -0.79
SSBP3-212ENST00000528930 NKD2Q969F2 451 aaPredicted RBP10.12□□□□□ -0.79
SSBP3-212ENST00000528930 AS3MTQ9HBK9 375 aa10.12□□□□□ -0.79
SSBP3-212ENST00000528930 SLC4A4Q9Y6R1 1079 aa10.12□□□□□ -0.79
SSBP3-212ENST00000528930 IVNS1ABPQ9Y6Y0 642 aa10.12□□□□□ -0.79
SSBP3-212ENST00000528930 ELP1O95163 1332 aa10.11□□□□□ -0.79
SSBP3-212ENST00000528930 CYP2D7A0A087X1C5 515 aa10.11□□□□□ -0.79
SSBP3-212ENST00000528930 GSG1L2A8MUP6 293 aa10.11□□□□□ -0.79
SSBP3-212ENST00000528930 USP17L12C9JPN9 530 aa10.11□□□□□ -0.79
SSBP3-212ENST00000528930 USP17L21D6R901 530 aa10.11□□□□□ -0.79
SSBP3-212ENST00000528930 M0R2C6 588 aa10.11□□□□□ -0.79
SSBP3-212ENST00000528930 CD4P01730 458 aa10.11□□□□□ -0.79
SSBP3-212ENST00000528930 GUCY1A2P33402 732 aa10.11□□□□□ -0.79
SSBP3-212ENST00000528930 IRX6P78412 446 aaPredicted RBP10.11□□□□□ -0.79
SSBP3-212ENST00000528930 COL19A1Q14993 1142 aa10.11□□□□□ -0.79
SSBP3-212ENST00000528930 CCSAPQ6IQ19 270 aaPredicted RBP10.11□□□□□ -0.79
SSBP3-212ENST00000528930 B4GALNT3Q6L9W6 998 aa10.11□□□□□ -0.79
SSBP3-212ENST00000528930 DYNLL2Q96FJ2 89 aa10.11□□□□□ -0.79
SSBP3-212ENST00000528930 SEC62Q99442 399 aaKnown RBP10.11□□□□□ -0.79
SSBP3-212ENST00000528930 LNPKQ9C0E8 428 aa10.11□□□□□ -0.79
SSBP3-212ENST00000528930 DLL3Q9NYJ7 618 aa10.11□□□□□ -0.79
SSBP3-212ENST00000528930 TMOD4Q9NZQ9 345 aa10.11□□□□□ -0.79
SSBP3-212ENST00000528930 NRBP1Q9UHY1 535 aa10.11□□□□□ -0.79
SSBP3-212ENST00000528930 DACH1Q9UI36 760 aa10.11□□□□□ -0.79
SSBP3-212ENST00000528930 NLRC5Q86WI3 1866 aa10.1□□□□□ -0.79
SSBP3-212ENST00000528930 UMODL1Q5DID0 1318 aa10.1□□□□□ -0.79
SSBP3-212ENST00000528930 C19orf81C9J6K1 198 aa10.1□□□□□ -0.79
SSBP3-212ENST00000528930 USP17L10C9JJH3 530 aa10.1□□□□□ -0.79
SSBP3-212ENST00000528930 H3BQ06 376 aaPredicted RBP10.1□□□□□ -0.79
SSBP3-212ENST00000528930 GPAA1O43292 621 aa10.1□□□□□ -0.79
SSBP3-212ENST00000528930 NUCB1Q02818 461 aa10.1□□□□□ -0.79
SSBP3-212ENST00000528930 ABCB5Q2M3G0 1257 aa10.1□□□□□ -0.79
SSBP3-212ENST00000528930 ZMYM1Q5SVZ6 1142 aa10.1□□□□□ -0.79
SSBP3-212ENST00000528930 MCTP2Q6DN12 878 aa10.1□□□□□ -0.79
SSBP3-212ENST00000528930 CTR9Q6PD62 1173 aa10.1□□□□□ -0.79
SSBP3-212ENST00000528930 CHD1LQ86WJ1 897 aa10.1□□□□□ -0.79
SSBP3-212ENST00000528930 KLHDC9Q8NEP7 349 aa10.1□□□□□ -0.79
SSBP3-212ENST00000528930 KCNV2Q8TDN2 545 aa10.1□□□□□ -0.79
SSBP3-212ENST00000528930 SLC9A7Q96T83 725 aa10.1□□□□□ -0.79
SSBP3-212ENST00000528930 POP1Q99575 1024 aaKnown RBP10.1□□□□□ -0.79
SSBP3-212ENST00000528930 SWAP70Q9UH65 585 aa10.1□□□□□ -0.79
SSBP3-212ENST00000528930 UNC79Q9P2D8 2635 aa10.1□□□□□ -0.79
SSBP3-212ENST00000528930 MCM3APO60318 1980 aa10.1□□□□□ -0.79
SSBP3-212ENST00000528930 RALGAPA2Q2PPJ7 1873 aa10.09□□□□□ -0.79
SSBP3-212ENST00000528930 ZBBXA8MT70 800 aa10.09□□□□□ -0.79
SSBP3-212ENST00000528930 ADORA2AP29274 412 aa10.09□□□□□ -0.79
SSBP3-212ENST00000528930 CDK8P49336 464 aa10.09□□□□□ -0.79
SSBP3-212ENST00000528930 SEPT2Q15019 361 aa10.09□□□□□ -0.79
SSBP3-212ENST00000528930 RAB3GAP1Q15042 981 aa10.09□□□□□ -0.79
SSBP3-212ENST00000528930 SBK1Q52WX2 424 aa10.09□□□□□ -0.79
SSBP3-212ENST00000528930 WDR78Q5VTH9 848 aa10.09□□□□□ -0.79
SSBP3-212ENST00000528930 GIMAP6Q6P9H5 292 aa10.09□□□□□ -0.79
SSBP3-212ENST00000528930 LBX2Q6XYB7 198 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms