RNA–Protein interactions for RNA: ENST00000528789.1

CHRDL2-206, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-206ENST00000528789 PAWRQ96IZ0 340 aaKnown RBP20.11■□□□□ 0.81
CHRDL2-206ENST00000528789 SLKQ9H2G2 1235 aaPredicted RBP20.11■□□□□ 0.81
CHRDL2-206ENST00000528789 PSTPIP2Q9H939 334 aa20.11■□□□□ 0.81
CHRDL2-206ENST00000528789 VTA1Q9NP79 307 aa20.11■□□□□ 0.81
CHRDL2-206ENST00000528789 XPNPEP3Q9NQH7 507 aa20.11■□□□□ 0.81
CHRDL2-206ENST00000528789 MAP3K20Q9NYL2 800 aaKnown RBP20.11■□□□□ 0.81
CHRDL2-206ENST00000528789 LOC102724159A0A0B4J2E5 919 aa20.1■□□□□ 0.81
CHRDL2-206ENST00000528789 STXBP3O00186 592 aa20.1■□□□□ 0.81
CHRDL2-206ENST00000528789 CPLX1O14810 134 aa20.1■□□□□ 0.81
CHRDL2-206ENST00000528789 PRPF3O43395 683 aaKnown RBP20.1■□□□□ 0.81
CHRDL2-206ENST00000528789 LARGE1O95461 756 aa20.1■□□□□ 0.81
CHRDL2-206ENST00000528789 PGK1P00558 417 aa20.1■□□□□ 0.81
CHRDL2-206ENST00000528789 SCG2P13521 617 aa20.1■□□□□ 0.81
CHRDL2-206ENST00000528789 IFNAR1P17181 557 aa20.1■□□□□ 0.81
CHRDL2-206ENST00000528789 PTGS1P23219 599 aa20.1■□□□□ 0.81
CHRDL2-206ENST00000528789 AKAP17AQ02040 695 aaKnown RBP20.1■□□□□ 0.81
CHRDL2-206ENST00000528789 PWP2Q15269 919 aaKnown RBP20.1■□□□□ 0.81
CHRDL2-206ENST00000528789 UBE2SQ16763 222 aa20.1■□□□□ 0.81
CHRDL2-206ENST00000528789 PFKFB3Q16875 520 aaPredicted RBP20.1■□□□□ 0.81
CHRDL2-206ENST00000528789 TMEM63BQ5T3F8 832 aa20.1■□□□□ 0.81
CHRDL2-206ENST00000528789 GJC2Q5T442 439 aaPredicted RBP20.1■□□□□ 0.81
CHRDL2-206ENST00000528789 TAPT1Q6NXT6 567 aa20.1■□□□□ 0.81
CHRDL2-206ENST00000528789 UBE2Q1Q7Z7E8 422 aa20.1■□□□□ 0.81
CHRDL2-206ENST00000528789 SAMD3Q8N6K7 520 aa20.1■□□□□ 0.81
CHRDL2-206ENST00000528789 ANKLE1Q8NAG6 615 aa20.1■□□□□ 0.81
CHRDL2-206ENST00000528789 SMARCC2Q8TAQ2 1214 aa20.1■□□□□ 0.81
CHRDL2-206ENST00000528789 B4DLN1 442 aa20.09■□□□□ 0.81
CHRDL2-206ENST00000528789 MEIS2O14770 477 aa20.09■□□□□ 0.81
CHRDL2-206ENST00000528789 PFKFB2O60825 505 aa20.09■□□□□ 0.81
CHRDL2-206ENST00000528789 DTNBO60941 627 aa20.09■□□□□ 0.81
CHRDL2-206ENST00000528789 MRPL12P52815 198 aaKnown RBP20.09■□□□□ 0.81
CHRDL2-206ENST00000528789 TNFAIP2Q03169 654 aa20.09■□□□□ 0.81
CHRDL2-206ENST00000528789 PKN1Q16512 942 aa20.09■□□□□ 0.81
CHRDL2-206ENST00000528789 IL31RAQ8NI17 732 aa20.09■□□□□ 0.81
CHRDL2-206ENST00000528789 PDCD2LQ9BRP1 358 aa20.09■□□□□ 0.81
CHRDL2-206ENST00000528789 BARHL2Q9NY43 387 aa20.09■□□□□ 0.81
CHRDL2-206ENST00000528789 NR3C2P08235 984 aa20.08■□□□□ 0.81
CHRDL2-206ENST00000528789 MYCLP12524 364 aaPredicted RBP20.08■□□□□ 0.81
CHRDL2-206ENST00000528789 SMPD1P17405 629 aa20.08■□□□□ 0.81
CHRDL2-206ENST00000528789 CAPN2P17655 700 aa20.08■□□□□ 0.81
CHRDL2-206ENST00000528789 IRX5P78411 483 aaPredicted RBP20.08■□□□□ 0.81
CHRDL2-206ENST00000528789 ME3Q16798 604 aa20.08■□□□□ 0.81
CHRDL2-206ENST00000528789 PPP1R18Q6NYC8 613 aa20.08■□□□□ 0.81
CHRDL2-206ENST00000528789 NECAB1Q8N987 351 aa20.08■□□□□ 0.81
CHRDL2-206ENST00000528789 ZFP91Q96JP5 570 aaPredicted RBP20.08■□□□□ 0.81
CHRDL2-206ENST00000528789 IWS1Q96ST2 819 aa20.08■□□□□ 0.81
CHRDL2-206ENST00000528789 RNF26Q9BY78 433 aaPredicted RBP20.08■□□□□ 0.81
CHRDL2-206ENST00000528789 MKI67P46013 3256 aaKnown RBP20.07■□□□□ 0.8
CHRDL2-206ENST00000528789 SYNRGQ9UMZ2 1314 aa20.07■□□□□ 0.8
CHRDL2-206ENST00000528789 hCG_1984214I3L0E3 225 aa20.07■□□□□ 0.8
CHRDL2-206ENST00000528789 PIK3CDO00329 1044 aa20.07■□□□□ 0.8
CHRDL2-206ENST00000528789 DUSP11O75319 330 aaKnown RBP20.07■□□□□ 0.8
CHRDL2-206ENST00000528789 ADCY7P51828 1080 aa20.07■□□□□ 0.8
CHRDL2-206ENST00000528789 SSRP1Q08945 709 aaKnown RBP20.07■□□□□ 0.8
CHRDL2-206ENST00000528789 PGM5Q15124 567 aa20.07■□□□□ 0.8
CHRDL2-206ENST00000528789 LRRC41Q15345 812 aa20.07■□□□□ 0.8
CHRDL2-206ENST00000528789 STXBP2Q15833 593 aa20.07■□□□□ 0.8
CHRDL2-206ENST00000528789 CPLX2Q6PUV4 134 aaKnown RBP20.07■□□□□ 0.8
CHRDL2-206ENST00000528789 SEPT14Q6ZU15 432 aa20.07■□□□□ 0.8
CHRDL2-206ENST00000528789 NECAB2Q7Z6G3 386 aa20.07■□□□□ 0.8
CHRDL2-206ENST00000528789 ZNF713Q8N859 430 aaPredicted RBP20.07■□□□□ 0.8
CHRDL2-206ENST00000528789 ARRDC4Q8NCT1 418 aa20.07■□□□□ 0.8
CHRDL2-206ENST00000528789 BACH2Q9BYV9 841 aa20.07■□□□□ 0.8
CHRDL2-206ENST00000528789 WDR11Q9BZH6 1224 aa20.07■□□□□ 0.8
CHRDL2-206ENST00000528789 C11orf49Q9H6J7 331 aa20.07■□□□□ 0.8
CHRDL2-206ENST00000528789 RBM27Q9P2N5 1060 aaKnown RBP20.07■□□□□ 0.8
CHRDL2-206ENST00000528789 MYADML2A6NDP7 307 aa20.06■□□□□ 0.8
CHRDL2-206ENST00000528789 SMCO2A6NFE2 343 aa20.06■□□□□ 0.8
CHRDL2-206ENST00000528789 DNM1LO00429 736 aa20.06■□□□□ 0.8
CHRDL2-206ENST00000528789 ADAMTS4O75173 837 aa20.06■□□□□ 0.8
CHRDL2-206ENST00000528789 IQSEC1Q6DN90 963 aa20.06■□□□□ 0.8
CHRDL2-206ENST00000528789 TRIM22Q8IYM9 498 aa20.06■□□□□ 0.8
CHRDL2-206ENST00000528789 RIC8AQ9NPQ8 531 aa20.06■□□□□ 0.8
CHRDL2-206ENST00000528789 RBM47A0AV96 593 aaKnown RBP20.05■□□□□ 0.8
CHRDL2-206ENST00000528789 KBTBD13C9JR72 458 aa20.05■□□□□ 0.8
CHRDL2-206ENST00000528789 CCND2P30279 289 aa20.05■□□□□ 0.8
CHRDL2-206ENST00000528789 RNF180Q86T96 592 aa20.05■□□□□ 0.8
CHRDL2-206ENST00000528789 TLK2Q86UE8 772 aa20.05■□□□□ 0.8
CHRDL2-206ENST00000528789 TBC1D32Q96NH3 1257 aa20.05■□□□□ 0.8
CHRDL2-206ENST00000528789 VPS54Q9P1Q0 977 aa20.05■□□□□ 0.8
CHRDL2-206ENST00000528789 GNEQ9Y223 722 aaKnown RBP20.05■□□□□ 0.8
CHRDL2-206ENST00000528789 FRMPD4Q14CM0 1322 aa20.04■□□□□ 0.8
CHRDL2-206ENST00000528789 DYNC1LI2O43237 492 aaPredicted RBP20.04■□□□□ 0.8
CHRDL2-206ENST00000528789 EIF3JO75822 258 aaKnown RBP20.04■□□□□ 0.8
CHRDL2-206ENST00000528789 ARIH2O95376 493 aa20.04■□□□□ 0.8
CHRDL2-206ENST00000528789 C6orf222P0C671 652 aaPredicted RBP20.04■□□□□ 0.8
CHRDL2-206ENST00000528789 RABEP1Q15276 862 aa20.04■□□□□ 0.8
CHRDL2-206ENST00000528789 VSIG10LQ86VR7 867 aa20.04■□□□□ 0.8
CHRDL2-206ENST00000528789 SCFD2Q8WU76 684 aa20.04■□□□□ 0.8
CHRDL2-206ENST00000528789 COPS5Q92905 334 aa20.04■□□□□ 0.8
CHRDL2-206ENST00000528789 GTF3C6Q969F1 213 aa20.04■□□□□ 0.8
CHRDL2-206ENST00000528789 FERMT2Q96AC1 680 aa20.04■□□□□ 0.8
CHRDL2-206ENST00000528789 PGBD1Q96JS3 809 aa20.04■□□□□ 0.8
CHRDL2-206ENST00000528789 TMEM260Q9NX78 707 aa20.04■□□□□ 0.8
CHRDL2-206ENST00000528789 PCDHA6Q9UN73 950 aa20.04■□□□□ 0.8
CHRDL2-206ENST00000528789 PCDHA8Q9Y5H6 950 aa20.04■□□□□ 0.8
CHRDL2-206ENST00000528789 SPDYE3A6NKU9 549 aa20.03■□□□□ 0.8
CHRDL2-206ENST00000528789 ADAMTS3O15072 1205 aa20.03■□□□□ 0.8
CHRDL2-206ENST00000528789 CDKL5O76039 1030 aa20.03■□□□□ 0.8
CHRDL2-206ENST00000528789 DEXIO95424 95 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms