RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 A0A087X0B3 334 aa4.51□□□□□ -1.69
BRCA2-203ENST00000528762 CBFA2T2O43439 604 aa4.51□□□□□ -1.69
BRCA2-203ENST00000528762 PEX10O60683 326 aa4.51□□□□□ -1.69
BRCA2-203ENST00000528762 TRIM13O60858 407 aa4.51□□□□□ -1.69
BRCA2-203ENST00000528762 SEMA7AO75326 666 aa4.51□□□□□ -1.69
BRCA2-203ENST00000528762 RAPGEF3O95398 923 aa4.51□□□□□ -1.69
BRCA2-203ENST00000528762 FGFR1P11362 822 aa4.51□□□□□ -1.69
BRCA2-203ENST00000528762 PABPC1P11940 636 aaKnown RBP4.51□□□□□ -1.69
BRCA2-203ENST00000528762 ITGA4P13612 1032 aa4.51□□□□□ -1.69
BRCA2-203ENST00000528762 CNGA1P29973 690 aa4.51□□□□□ -1.69
BRCA2-203ENST00000528762 VIPR1P32241 457 aa4.51□□□□□ -1.69
BRCA2-203ENST00000528762 PCBP3P57721 371 aaKnown RBP4.51□□□□□ -1.69
BRCA2-203ENST00000528762 YOD1Q5VVQ6 348 aaPredicted RBP4.51□□□□□ -1.69
BRCA2-203ENST00000528762 POMZP3Q6PJE2 187 aa4.51□□□□□ -1.69
BRCA2-203ENST00000528762 RNF111Q6ZNA4 994 aa4.51□□□□□ -1.69
BRCA2-203ENST00000528762 ARHGEF39Q8N4T4 335 aa4.51□□□□□ -1.69
BRCA2-203ENST00000528762 CRACR2BQ8N4Y2 399 aaPredicted RBP4.51□□□□□ -1.69
BRCA2-203ENST00000528762 ZNF513Q8N8E2 541 aaPredicted RBP4.51□□□□□ -1.69
BRCA2-203ENST00000528762 MFSD3Q96ES6 412 aa4.51□□□□□ -1.69
BRCA2-203ENST00000528762 KRTAP4-11Q9BYQ6 195 aa4.51□□□□□ -1.69
BRCA2-203ENST00000528762 CAAP1Q9H8G2 361 aa4.51□□□□□ -1.69
BRCA2-203ENST00000528762 NCOA5Q9HCD5 579 aaKnown RBP4.51□□□□□ -1.69
BRCA2-203ENST00000528762 GP6Q9HCN6 339 aa4.51□□□□□ -1.69
BRCA2-203ENST00000528762 PARD6AQ9NPB6 346 aa4.51□□□□□ -1.69
BRCA2-203ENST00000528762 GFOD1Q9NXC2 390 aa4.51□□□□□ -1.69
BRCA2-203ENST00000528762 APEX2Q9UBZ4 518 aa4.51□□□□□ -1.69
BRCA2-203ENST00000528762 MBD1Q9UIS9 605 aaPredicted RBP4.51□□□□□ -1.69
BRCA2-203ENST00000528762 A0A0G2JLL6 359 aaPredicted RBP4.5□□□□□ -1.69
BRCA2-203ENST00000528762 FAM83GA6ND36 823 aa4.5□□□□□ -1.69
BRCA2-203ENST00000528762 IRS4O14654 1257 aaPredicted RBP4.5□□□□□ -1.69
BRCA2-203ENST00000528762 NRDCO43847 1150 aa4.5□□□□□ -1.69
BRCA2-203ENST00000528762 STAT3P40763 770 aa4.5□□□□□ -1.69
BRCA2-203ENST00000528762 GRIA2P42262 883 aa4.5□□□□□ -1.69
BRCA2-203ENST00000528762 NCKAP1LP55160 1127 aa4.5□□□□□ -1.69
BRCA2-203ENST00000528762 CRTC3Q6UUV7 619 aa4.5□□□□□ -1.69
BRCA2-203ENST00000528762 ZNF227Q86WZ6 799 aa4.5□□□□□ -1.69
BRCA2-203ENST00000528762 DAGLBQ8NCG7 672 aa4.5□□□□□ -1.69
BRCA2-203ENST00000528762 CHAC2Q8WUX2 184 aa4.5□□□□□ -1.69
BRCA2-203ENST00000528762 MRGPRX3Q96LB0 322 aa4.5□□□□□ -1.69
BRCA2-203ENST00000528762 CCDC140Q96MF4 163 aa4.5□□□□□ -1.69
BRCA2-203ENST00000528762 CLUHP3Q96NS8 147 aa4.5□□□□□ -1.69
BRCA2-203ENST00000528762 CDADC1Q9BWV3 514 aa4.5□□□□□ -1.69
BRCA2-203ENST00000528762 LGR4Q9BXB1 951 aa4.5□□□□□ -1.69
BRCA2-203ENST00000528762 MRPL4Q9BYD3 311 aaKnown RBP4.5□□□□□ -1.69
BRCA2-203ENST00000528762 SIRT5Q9NXA8 310 aa4.5□□□□□ -1.69
BRCA2-203ENST00000528762 ZNF281Q9Y2X9 895 aa4.5□□□□□ -1.69
BRCA2-203ENST00000528762 EMC9Q9Y3B6 208 aa4.5□□□□□ -1.69
BRCA2-203ENST00000528762 PCDHB12Q9Y5F1 795 aa4.5□□□□□ -1.69
BRCA2-203ENST00000528762 NUDT19A8MXV4 375 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 PDGFRBP09619 1106 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 HOXC12P31275 282 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 SOX5P35711 763 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 CDKN1CP49918 316 aaPredicted RBP4.49□□□□□ -1.69
BRCA2-203ENST00000528762 RTP1P59025 263 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 ZNF445P59923 1031 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 SUMO1P63165 101 aaKnown RBP4.49□□□□□ -1.69
BRCA2-203ENST00000528762 NFKB2Q00653 900 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 PPP2R5DQ14738 602 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 SNX17Q15036 470 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 HSF5Q4G112 596 aaPredicted RBP4.49□□□□□ -1.69
BRCA2-203ENST00000528762 ZNF385BQ569K4 471 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 CT47A1Q5JQC4 288 aaPredicted RBP4.49□□□□□ -1.69
BRCA2-203ENST00000528762 TCERG1LQ5VWI1 586 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 CNNM4Q6P4Q7 775 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 JAMLQ86YT9 394 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 TRIM59Q8IWR1 403 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 ZNF655Q8N720 491 aaPredicted RBP4.49□□□□□ -1.69
BRCA2-203ENST00000528762 ADCY4Q8NFM4 1077 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 ENOX1Q8TC92 643 aaKnown RBP4.49□□□□□ -1.69
BRCA2-203ENST00000528762 BRF1Q92994 677 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 OSBP2Q969R2 916 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 IER2Q9BTL4 223 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 CNTD2Q9H8S5 307 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 CHST7Q9NS84 486 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 HOMER2Q9NSB8 354 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 ATP8A1Q9Y2Q0 1164 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 IRAK3Q9Y616 596 aa4.49□□□□□ -1.69
BRCA2-203ENST00000528762 GSG1L2A8MUP6 293 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 RFXAPO00287 272 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 SHOXO15266 292 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 SIGLEC6O43699 453 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 DLX3O60479 287 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 PDE8AO60658 829 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 KCNH1O95259 989 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 CTSKP43235 329 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 CDR1P51861 262 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 GABREP78334 506 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 DDX46Q7L014 1031 aaKnown RBP4.48□□□□□ -1.69
BRCA2-203ENST00000528762 TMC6Q7Z403 805 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 RNF180Q86T96 592 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 FERMT3Q86UX7 667 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 ZDHHC14Q8IZN3 488 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 AHI1Q8N157 1196 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 UBR7Q8N806 425 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 PRPF38AQ8NAV1 312 aaKnown RBP4.48□□□□□ -1.69
BRCA2-203ENST00000528762 SYT8Q8NBV8 401 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 LINC00116Q8NCU8 138 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 FEZF2Q8TBJ5 459 aa4.48□□□□□ -1.69
BRCA2-203ENST00000528762 DDX1Q92499 740 aaKnown RBP4.48□□□□□ -1.69
BRCA2-203ENST00000528762 RELTQ969Z4 430 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms