RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 CABYRO75952 493 aa14.03□□□□□ -0.16
TRAPPC4-209ENST00000528230 CFBP00751 764 aa14.03□□□□□ -0.16
TRAPPC4-209ENST00000528230 ASGR1P07306 291 aa14.03□□□□□ -0.16
TRAPPC4-209ENST00000528230 SYN1P17600 705 aa14.03□□□□□ -0.16
TRAPPC4-209ENST00000528230 ADCK5Q3MIX3 580 aa14.03□□□□□ -0.16
TRAPPC4-209ENST00000528230 TRIM60Q495X7 471 aa14.03□□□□□ -0.16
TRAPPC4-209ENST00000528230 TLK2Q86UE8 772 aa14.03□□□□□ -0.16
TRAPPC4-209ENST00000528230 FANCBQ8NB91 859 aa14.03□□□□□ -0.16
TRAPPC4-209ENST00000528230 SCFD2Q8WU76 684 aa14.03□□□□□ -0.16
TRAPPC4-209ENST00000528230 RRP36Q96EU6 259 aaKnown RBP14.03□□□□□ -0.16
TRAPPC4-209ENST00000528230 TOX2Q96NM4 488 aa14.03□□□□□ -0.16
TRAPPC4-209ENST00000528230 MYL10Q9BUA6 226 aa14.03□□□□□ -0.16
TRAPPC4-209ENST00000528230 COL20A1Q9P218 1284 aa14.03□□□□□ -0.16
TRAPPC4-209ENST00000528230 PRKAG2Q9UGJ0 569 aa14.03□□□□□ -0.16
TRAPPC4-209ENST00000528230 ATP11BQ9Y2G3 1177 aa14.03□□□□□ -0.16
TRAPPC4-209ENST00000528230 STXBP2Q15833 593 aa14.02□□□□□ -0.17
TRAPPC4-209ENST00000528230 FSCN1Q16658 493 aaKnown RBP14.02□□□□□ -0.17
TRAPPC4-209ENST00000528230 ARHGEF16Q5VV41 709 aa14.02□□□□□ -0.17
TRAPPC4-209ENST00000528230 ANKRD33Q7Z3H0 272 aa14.02□□□□□ -0.17
TRAPPC4-209ENST00000528230 SEZ6LQ9BYH1 1024 aa14.02□□□□□ -0.17
TRAPPC4-209ENST00000528230 LRRC2Q9BYS8 371 aa14.02□□□□□ -0.17
TRAPPC4-209ENST00000528230 MROH7Q68CQ1 1323 aa14.01□□□□□ -0.17
TRAPPC4-209ENST00000528230 GCOM1H8Y6P7 765 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC4-209ENST00000528230 EIF3JO75822 258 aaKnown RBP14.01□□□□□ -0.17
TRAPPC4-209ENST00000528230 POLR2MP0CAP2 368 aa14.01□□□□□ -0.17
TRAPPC4-209ENST00000528230 MAGEA10P43363 369 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC4-209ENST00000528230 CDK7P50613 346 aa14.01□□□□□ -0.17
TRAPPC4-209ENST00000528230 IRX5P78411 483 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC4-209ENST00000528230 BEX3Q00994 111 aa14.01□□□□□ -0.17
TRAPPC4-209ENST00000528230 TLE2Q04725 743 aa14.01□□□□□ -0.17
TRAPPC4-209ENST00000528230 TTLL4Q14679 1199 aa14.01□□□□□ -0.17
TRAPPC4-209ENST00000528230 SRBD1Q8N5C6 995 aaKnown RBP14.01□□□□□ -0.17
TRAPPC4-209ENST00000528230 PXMP2Q9NR77 195 aa14.01□□□□□ -0.17
TRAPPC4-209ENST00000528230 RBM28Q9NW13 759 aaKnown RBP14.01□□□□□ -0.17
TRAPPC4-209ENST00000528230 SEC63Q9UGP8 760 aaKnown RBP14.01□□□□□ -0.17
TRAPPC4-209ENST00000528230 SNX14Q9Y5W7 946 aa14.01□□□□□ -0.17
TRAPPC4-209ENST00000528230 A0A0U1RQG5 324 aaPredicted RBP14□□□□□ -0.17
TRAPPC4-209ENST00000528230 DCDC2CA8MYV0 355 aa14□□□□□ -0.17
TRAPPC4-209ENST00000528230 ARVCFO00192 962 aa14□□□□□ -0.17
TRAPPC4-209ENST00000528230 PLEKHA8P1O95397 391 aa14□□□□□ -0.17
TRAPPC4-209ENST00000528230 NR3C2P08235 984 aa14□□□□□ -0.17
TRAPPC4-209ENST00000528230 PSMA5P28066 241 aa14□□□□□ -0.17
TRAPPC4-209ENST00000528230 RCAN1P53805 252 aa14□□□□□ -0.17
TRAPPC4-209ENST00000528230 PPP2R5BQ15173 497 aa14□□□□□ -0.17
TRAPPC4-209ENST00000528230 TMEM63BQ5T3F8 832 aa14□□□□□ -0.17
TRAPPC4-209ENST00000528230 CCDC62Q6P9F0 684 aa14□□□□□ -0.17
TRAPPC4-209ENST00000528230 APOA5Q6Q788 366 aa14□□□□□ -0.17
TRAPPC4-209ENST00000528230 FBXL16Q8N461 479 aa14□□□□□ -0.17
TRAPPC4-209ENST00000528230 VTI1AQ96AJ9 217 aa14□□□□□ -0.17
TRAPPC4-209ENST00000528230 LBHD1Q9BQE6 289 aaPredicted RBP14□□□□□ -0.17
TRAPPC4-209ENST00000528230 MYH7BA7E2Y1 1941 aa14□□□□□ -0.17
TRAPPC4-209ENST00000528230 LTBP2Q14767 1821 aa13.99□□□□□ -0.17
TRAPPC4-209ENST00000528230 ZBTB43O43298 467 aa13.99□□□□□ -0.17
TRAPPC4-209ENST00000528230 KPNA6O60684 536 aa13.99□□□□□ -0.17
TRAPPC4-209ENST00000528230 CLTBP09497 229 aa13.99□□□□□ -0.17
TRAPPC4-209ENST00000528230 TXNP10599 105 aaKnown RBP13.99□□□□□ -0.17
TRAPPC4-209ENST00000528230 EIF2AK2P19525 551 aaKnown RBP13.99□□□□□ -0.17
TRAPPC4-209ENST00000528230 RXRAP19793 462 aa13.99□□□□□ -0.17
TRAPPC4-209ENST00000528230 CPT1AP50416 773 aa13.99□□□□□ -0.17
TRAPPC4-209ENST00000528230 BRDTQ58F21 947 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC4-209ENST00000528230 BLOC1S2Q6QNY1 142 aa13.99□□□□□ -0.17
TRAPPC4-209ENST00000528230 TMTC3Q6ZXV5 915 aa13.99□□□□□ -0.17
TRAPPC4-209ENST00000528230 VSIG10LQ86VR7 867 aa13.99□□□□□ -0.17
TRAPPC4-209ENST00000528230 MICU3Q86XE3 530 aa13.99□□□□□ -0.17
TRAPPC4-209ENST00000528230 TCEANC2Q96MN5 208 aa13.99□□□□□ -0.17
TRAPPC4-209ENST00000528230 PDCD2LQ9BRP1 358 aa13.99□□□□□ -0.17
TRAPPC4-209ENST00000528230 PDLIM7Q9NR12 457 aa13.99□□□□□ -0.17
TRAPPC4-209ENST00000528230 POLR3EQ9NVU0 708 aa13.99□□□□□ -0.17
TRAPPC4-209ENST00000528230 BRPF3Q9ULD4 1205 aa13.99□□□□□ -0.17
TRAPPC4-209ENST00000528230 A6NJR5 290 aa13.98□□□□□ -0.17
TRAPPC4-209ENST00000528230 PIK3CDO00329 1044 aa13.98□□□□□ -0.17
TRAPPC4-209ENST00000528230 KIAA0355O15063 1070 aa13.98□□□□□ -0.17
TRAPPC4-209ENST00000528230 HOXA13P31271 388 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC4-209ENST00000528230 FXR1P51114 621 aaKnown RBP eCLIP13.98□□□□□ -0.17
TRAPPC4-209ENST00000528230 FGD1P98174 961 aa13.98□□□□□ -0.17
TRAPPC4-209ENST00000528230 FAAP100Q0VG06 881 aa13.98□□□□□ -0.17
TRAPPC4-209ENST00000528230 PGM5Q15124 567 aa13.98□□□□□ -0.17
TRAPPC4-209ENST00000528230 KCNV1Q6PIU1 500 aa13.98□□□□□ -0.17
TRAPPC4-209ENST00000528230 CXCL17Q6UXB2 119 aa13.98□□□□□ -0.17
TRAPPC4-209ENST00000528230 SEPT14Q6ZU15 432 aa13.98□□□□□ -0.17
TRAPPC4-209ENST00000528230 SLC43A3Q8NBI5 491 aa13.98□□□□□ -0.17
TRAPPC4-209ENST00000528230 OR6J1Q8NGC5 347 aa13.98□□□□□ -0.17
TRAPPC4-209ENST00000528230 PIBF1Q8WXW3 757 aa13.98□□□□□ -0.17
TRAPPC4-209ENST00000528230 JAKMIP1Q96N16 626 aaKnown RBP13.98□□□□□ -0.17
TRAPPC4-209ENST00000528230 USP26Q9BXU7 913 aa13.98□□□□□ -0.17
TRAPPC4-209ENST00000528230 UBE2OQ9C0C9 1292 aaKnown RBP13.98□□□□□ -0.17
TRAPPC4-209ENST00000528230 KLF18A0A0U1RQI7 1052 aa13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 TRIM43BA6NCK2 446 aa13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 PQBP1O60828 265 aaKnown RBP13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 ARIH2O95376 493 aa13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 SLC34A2O95436 690 aa13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 PTGS1P23219 599 aa13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 RPS6KB1P23443 525 aa13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 MDM2Q00987 491 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 ITGA7Q13683 1181 aa13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 RTN1Q16799 776 aa13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 Q6ZUG5 572 aa13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 SH3RF1Q7Z6J0 888 aa13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 FCHSD1Q86WN1 690 aa13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 RAB11FIP4Q86YS3 637 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms