RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 NAALADL2Q58DX5 795 aa13.91□□□□□ -0.18
CAPN1-208ENST00000527323 MFSD14BQ5SR56 506 aa13.91□□□□□ -0.18
CAPN1-208ENST00000527323 FKBP15Q5T1M5 1219 aa13.91□□□□□ -0.18
CAPN1-208ENST00000527323 ZC3H12CQ9C0D7 883 aaKnown RBP13.91□□□□□ -0.18
CAPN1-208ENST00000527323 TMEM60Q9H2L4 133 aa13.91□□□□□ -0.18
CAPN1-208ENST00000527323 KAT14Q9H8E8 782 aa13.91□□□□□ -0.18
CAPN1-208ENST00000527323 NOP2P46087 812 aaKnown RBP13.91□□□□□ -0.18
CAPN1-208ENST00000527323 KCNB1Q14721 858 aa13.91□□□□□ -0.18
CAPN1-208ENST00000527323 MEA1Q16626 185 aa13.91□□□□□ -0.18
CAPN1-208ENST00000527323 CCDC181Q5TID7 509 aa13.91□□□□□ -0.18
CAPN1-208ENST00000527323 TTI2Q6NXR4 508 aa13.91□□□□□ -0.18
CAPN1-208ENST00000527323 PACS2Q86VP3 889 aa13.91□□□□□ -0.18
CAPN1-208ENST00000527323 KIAA0825Q8IV33 1275 aa13.91□□□□□ -0.18
CAPN1-208ENST00000527323 PIAS4Q8N2W9 510 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-208ENST00000527323 C4orf32Q8N8J7 132 aa13.91□□□□□ -0.18
CAPN1-208ENST00000527323 NOC3LQ8WTT2 800 aaKnown RBP13.91□□□□□ -0.18
CAPN1-208ENST00000527323 CNOT6LQ96LI5 555 aaKnown RBP13.91□□□□□ -0.18
CAPN1-208ENST00000527323 ANKRD2Q9GZV1 360 aa13.91□□□□□ -0.18
CAPN1-208ENST00000527323 FAM205AQ6ZU69 1335 aa13.9□□□□□ -0.18
CAPN1-208ENST00000527323 ANO9A1A5B4 782 aa13.9□□□□□ -0.18
CAPN1-208ENST00000527323 CCT5P48643 541 aa13.9□□□□□ -0.18
CAPN1-208ENST00000527323 ASIC1P78348 528 aa13.9□□□□□ -0.18
CAPN1-208ENST00000527323 PICALMQ13492 652 aa13.9□□□□□ -0.18
CAPN1-208ENST00000527323 TYW1BQ6NUM6 668 aa13.9□□□□□ -0.18
CAPN1-208ENST00000527323 MICALL1Q8N3F8 863 aa13.9□□□□□ -0.18
CAPN1-208ENST00000527323 GIMAP8Q8ND71 665 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-208ENST00000527323 DHTKD1Q96HY7 919 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-208ENST00000527323 ZNF277Q9NRM2 450 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-208ENST00000527323 PCDHA4Q9UN74 947 aa13.9□□□□□ -0.18
CAPN1-208ENST00000527323 RHOBTB3O94955 611 aa13.9□□□□□ -0.18
CAPN1-208ENST00000527323 PCP11498 1178 aaKnown RBP13.9□□□□□ -0.18
CAPN1-208ENST00000527323 SLC7A5Q01650 507 aa13.9□□□□□ -0.18
CAPN1-208ENST00000527323 ANKRD40Q6AI12 368 aa13.9□□□□□ -0.18
CAPN1-208ENST00000527323 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.9□□□□□ -0.18
CAPN1-208ENST00000527323 FAM114A1Q8IWE2 563 aa13.9□□□□□ -0.18
CAPN1-208ENST00000527323 RETREG2Q8NC44 543 aa13.9□□□□□ -0.18
CAPN1-208ENST00000527323 P2RX5Q93086 422 aa13.9□□□□□ -0.18
CAPN1-208ENST00000527323 RUFY1Q96T51 708 aa13.9□□□□□ -0.18
CAPN1-208ENST00000527323 LRRC1Q9BTT6 524 aa13.9□□□□□ -0.18
CAPN1-208ENST00000527323 TCP11L1Q9NUJ3 509 aa13.9□□□□□ -0.18
CAPN1-208ENST00000527323 CACNA1SQ13698 1873 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 BICDL2A1A5D9 508 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 AGPSO00116 658 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 KLRC4O43908 158 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 CXCR5P32302 372 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 GTF2A1P52655 376 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-208ENST00000527323 VAV2P52735 878 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 NAP1L1P55209 391 aaKnown RBP13.89□□□□□ -0.19
CAPN1-208ENST00000527323 HEATR3Q7Z4Q2 680 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 CERS3Q8IU89 383 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 DUSP9Q99956 384 aaKnown RBP13.89□□□□□ -0.19
CAPN1-208ENST00000527323 IFIH1Q9BYX4 1025 aaKnown RBP13.89□□□□□ -0.19
CAPN1-208ENST00000527323 TSGA10Q9BZW7 698 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 FAM184BQ9ULE4 1060 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 CASZ1Q86V15 1759 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 CHD4Q14839 1912 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 AKR1B10O60218 316 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 PLEKP08567 350 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-208ENST00000527323 USP17L8P0C7I0 530 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 CCNE1P24864 410 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 TTC19Q6DKK2 380 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-208ENST00000527323 MAPKAPK5Q8IW41 473 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 TRIM58Q8NG06 486 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 HDAC7Q8WUI4 952 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 CRNKL1Q9BZJ0 848 aaKnown RBP13.89□□□□□ -0.19
CAPN1-208ENST00000527323 MLXIPQ9HAP2 919 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 JRKLQ9Y4A0 524 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 MYH6P13533 1939 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 MYH13Q9UKX3 1938 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 EBAG9O00559 213 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 MOCS3O95396 460 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 TIAM2Q8IVF5 1701 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 AMOTL1Q8IY63 956 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 SLC44A5Q8NCS7 719 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 NSUN4Q96CB9 384 aaKnown RBP13.89□□□□□ -0.19
CAPN1-208ENST00000527323 DYNLL2Q96FJ2 89 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 MMRN2Q9H8L6 949 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 FAM207AQ9NSI2 230 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-208ENST00000527323 SNX12Q9UMY4 172 aa13.89□□□□□ -0.19
CAPN1-208ENST00000527323 RASSF10A6NK89 507 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 RAD17O75943 681 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 PDE6BP35913 854 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 IRAK1P51617 712 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 RBM5P52756 815 aaKnown RBP eCLIP13.88□□□□□ -0.19
CAPN1-208ENST00000527323 ZNF662Q6ZS27 426 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 CABP7Q86V35 215 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 STAG2Q8N3U4 1231 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 BCAS4Q8TDM0 211 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 MASTLQ96GX5 879 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 CAPS2Q9BXY5 557 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 DMGDHQ9UI17 866 aaKnown RBP13.88□□□□□ -0.19
CAPN1-208ENST00000527323 FCER1AP12319 257 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 NPR1P16066 1061 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 PLCG1P19174 1290 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 PAFAH1B1P43034 410 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 TFAP4Q01664 338 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 STK4Q13043 487 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 EFCAB13Q8IY85 973 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 ANKRD13CQ8N6S4 541 aa13.88□□□□□ -0.19
CAPN1-208ENST00000527323 SH3RF3Q8TEJ3 882 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms