RNA–Protein interactions for RNA: ENST00000526506.5

HIF3A-210, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-210ENST00000526506 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.37■□□□□ 0.37
HIF3A-210ENST00000526506 ADAMTS4O75173 837 aa17.37■□□□□ 0.37
HIF3A-210ENST00000526506 EIF2AK2P19525 551 aaKnown RBP17.37■□□□□ 0.37
HIF3A-210ENST00000526506 PDIA3P30101 505 aaKnown RBP17.37■□□□□ 0.37
HIF3A-210ENST00000526506 ADD1P35611 737 aaKnown RBP17.37■□□□□ 0.37
HIF3A-210ENST00000526506 HEATR3Q7Z4Q2 680 aa17.37■□□□□ 0.37
HIF3A-210ENST00000526506 CUL5Q93034 780 aa17.37■□□□□ 0.37
HIF3A-210ENST00000526506 IL17RAQ96F46 866 aa17.37■□□□□ 0.37
HIF3A-210ENST00000526506 SENP6Q9GZR1 1112 aaPredicted RBP17.37■□□□□ 0.37
HIF3A-210ENST00000526506 PXMP2Q9NR77 195 aa17.37■□□□□ 0.37
HIF3A-210ENST00000526506 V9GY48 417 aaPredicted RBP17.37■□□□□ 0.37
HIF3A-210ENST00000526506 C6orf222P0C671 652 aaPredicted RBP17.36■□□□□ 0.37
HIF3A-210ENST00000526506 SMPD1P17405 629 aa17.36■□□□□ 0.37
HIF3A-210ENST00000526506 STXBP2Q15833 593 aa17.36■□□□□ 0.37
HIF3A-210ENST00000526506 UPF3AQ9H1J1 476 aaKnown RBP17.36■□□□□ 0.37
HIF3A-210ENST00000526506 PHF24Q9UPV7 400 aa17.36■□□□□ 0.37
HIF3A-210ENST00000526506 RBM47A0AV96 593 aaKnown RBP17.35■□□□□ 0.37
HIF3A-210ENST00000526506 hCG_1984214I3L0E3 225 aa17.35■□□□□ 0.37
HIF3A-210ENST00000526506 EVI5O60447 810 aa17.35■□□□□ 0.37
HIF3A-210ENST00000526506 NR3C2P08235 984 aa17.35■□□□□ 0.37
HIF3A-210ENST00000526506 GJA9P57773 515 aa17.35■□□□□ 0.37
HIF3A-210ENST00000526506 DUSP28Q4G0W2 176 aa17.35■□□□□ 0.37
HIF3A-210ENST00000526506 WWC2Q6AWC2 1192 aa17.35■□□□□ 0.37
HIF3A-210ENST00000526506 TLK2Q86UE8 772 aa17.35■□□□□ 0.37
HIF3A-210ENST00000526506 FCHSD1Q86WN1 690 aa17.35■□□□□ 0.37
HIF3A-210ENST00000526506 ZNF713Q8N859 430 aaPredicted RBP17.35■□□□□ 0.37
HIF3A-210ENST00000526506 KLHDC9Q8NEP7 349 aa17.35■□□□□ 0.37
HIF3A-210ENST00000526506 SMARCC2Q8TAQ2 1214 aa17.35■□□□□ 0.37
HIF3A-210ENST00000526506 SCFD2Q8WU76 684 aa17.35■□□□□ 0.37
HIF3A-210ENST00000526506 GPKOWQ92917 476 aaPredicted RBP eCLIP17.35■□□□□ 0.37
HIF3A-210ENST00000526506 ZNF274Q96GC6 653 aaPredicted RBP17.35■□□□□ 0.37
HIF3A-210ENST00000526506 PDCD2LQ9BRP1 358 aa17.35■□□□□ 0.37
HIF3A-210ENST00000526506 TSEN34Q9BSV6 310 aaKnown RBP17.35■□□□□ 0.37
HIF3A-210ENST00000526506 WDR11Q9BZH6 1224 aa17.35■□□□□ 0.37
HIF3A-210ENST00000526506 PSTPIP2Q9H939 334 aa17.35■□□□□ 0.37
HIF3A-210ENST00000526506 RBM27Q9P2N5 1060 aaKnown RBP17.35■□□□□ 0.37
HIF3A-210ENST00000526506 GNEQ9Y223 722 aaKnown RBP17.35■□□□□ 0.37
HIF3A-210ENST00000526506 MKI67P46013 3256 aaKnown RBP17.35■□□□□ 0.37
HIF3A-210ENST00000526506 MYADML2A6NDP7 307 aa17.34■□□□□ 0.37
HIF3A-210ENST00000526506 PIK3CDO00329 1044 aa17.34■□□□□ 0.37
HIF3A-210ENST00000526506 CST5P28325 142 aaPredicted RBP17.34■□□□□ 0.37
HIF3A-210ENST00000526506 NAPAP54920 295 aa17.34■□□□□ 0.37
HIF3A-210ENST00000526506 CCT2P78371 535 aaKnown RBP17.34■□□□□ 0.37
HIF3A-210ENST00000526506 PPP1R18Q6NYC8 613 aa17.34■□□□□ 0.37
HIF3A-210ENST00000526506 USP17L6PQ6QN14 398 aa17.34■□□□□ 0.37
HIF3A-210ENST00000526506 LARP6Q9BRS8 491 aaKnown RBP17.34■□□□□ 0.37
HIF3A-210ENST00000526506 AP5M1Q9H0R1 490 aa17.34■□□□□ 0.37
HIF3A-210ENST00000526506 ALDH8A1Q9H2A2 487 aaPredicted RBP17.34■□□□□ 0.37
HIF3A-210ENST00000526506 NCOA5Q9HCD5 579 aaKnown RBP17.34■□□□□ 0.37
HIF3A-210ENST00000526506 Q9Y3F1 56 aa17.34■□□□□ 0.37
HIF3A-210ENST00000526506 NR2E3Q9Y5X4 410 aa17.34■□□□□ 0.37
HIF3A-210ENST00000526506 MOXD2PA6NHM9 499 aa17.33■□□□□ 0.36
HIF3A-210ENST00000526506 MEIS2O14770 477 aa17.33■□□□□ 0.36
HIF3A-210ENST00000526506 EIF3JO75822 258 aaKnown RBP17.33■□□□□ 0.36
HIF3A-210ENST00000526506 NKX3-2P78367 333 aa17.33■□□□□ 0.36
HIF3A-210ENST00000526506 AKAP17AQ02040 695 aaKnown RBP17.33■□□□□ 0.36
HIF3A-210ENST00000526506 TTLL4Q14679 1199 aa17.33■□□□□ 0.36
HIF3A-210ENST00000526506 PGM5Q15124 567 aa17.33■□□□□ 0.36
HIF3A-210ENST00000526506 ANKRD1Q15327 319 aa17.33■□□□□ 0.36
HIF3A-210ENST00000526506 NTRK3Q16288 839 aa17.33■□□□□ 0.36
HIF3A-210ENST00000526506 TMEM63BQ5T3F8 832 aa17.33■□□□□ 0.36
HIF3A-210ENST00000526506 PRPF38BQ5VTL8 546 aaKnown RBP17.33■□□□□ 0.36
HIF3A-210ENST00000526506 CCSAPQ6IQ19 270 aaPredicted RBP17.33■□□□□ 0.36
HIF3A-210ENST00000526506 SEPT14Q6ZU15 432 aa17.33■□□□□ 0.36
HIF3A-210ENST00000526506 PCSK9Q8NBP7 692 aaKnown RBP17.33■□□□□ 0.36
HIF3A-210ENST00000526506 FERMT2Q96AC1 680 aa17.33■□□□□ 0.36
HIF3A-210ENST00000526506 FRMPD4Q14CM0 1322 aa17.32■□□□□ 0.36
HIF3A-210ENST00000526506 NKRFO15226 690 aaKnown RBP eCLIP17.32■□□□□ 0.36
HIF3A-210ENST00000526506 CTAGE5O15320 804 aa17.32■□□□□ 0.36
HIF3A-210ENST00000526506 DYNC1LI2O43237 492 aaPredicted RBP17.32■□□□□ 0.36
HIF3A-210ENST00000526506 PRPF3O43395 683 aaKnown RBP17.32■□□□□ 0.36
HIF3A-210ENST00000526506 TXNP10599 105 aaKnown RBP17.32■□□□□ 0.36
HIF3A-210ENST00000526506 MYCLP12524 364 aaPredicted RBP17.32■□□□□ 0.36
HIF3A-210ENST00000526506 SCG2P13521 617 aa17.32■□□□□ 0.36
HIF3A-210ENST00000526506 IFNAR1P17181 557 aa17.32■□□□□ 0.36
HIF3A-210ENST00000526506 PTGS1P23219 599 aa17.32■□□□□ 0.36
HIF3A-210ENST00000526506 CCND2P30279 289 aa17.32■□□□□ 0.36
HIF3A-210ENST00000526506 ACLYP53396 1101 aa17.32■□□□□ 0.36
HIF3A-210ENST00000526506 ATN1P54259 1190 aaPredicted RBP17.32■□□□□ 0.36
HIF3A-210ENST00000526506 IRX5P78411 483 aaPredicted RBP17.32■□□□□ 0.36
HIF3A-210ENST00000526506 KCNA10Q16322 511 aa17.32■□□□□ 0.36
HIF3A-210ENST00000526506 FSCN1Q16658 493 aaKnown RBP17.32■□□□□ 0.36
HIF3A-210ENST00000526506 PFKFB3Q16875 520 aaPredicted RBP17.32■□□□□ 0.36
HIF3A-210ENST00000526506 LRRC26Q2I0M4 334 aa17.32■□□□□ 0.36
HIF3A-210ENST00000526506 GNASQ5JWF2 1037 aa17.32■□□□□ 0.36
HIF3A-210ENST00000526506 VSIG10LQ86VR7 867 aa17.32■□□□□ 0.36
HIF3A-210ENST00000526506 TEX2Q8IWB9 1127 aa17.32■□□□□ 0.36
HIF3A-210ENST00000526506 IL31RAQ8NI17 732 aa17.32■□□□□ 0.36
HIF3A-210ENST00000526506 PHKBQ93100 1093 aa17.32■□□□□ 0.36
HIF3A-210ENST00000526506 RNF26Q9BY78 433 aaPredicted RBP17.32■□□□□ 0.36
HIF3A-210ENST00000526506 BARHL2Q9NY43 387 aa17.32■□□□□ 0.36
HIF3A-210ENST00000526506 A0A1W2PQ45 241 aaPredicted RBP17.31■□□□□ 0.36
HIF3A-210ENST00000526506 A0A1W2PQY0 241 aa17.31■□□□□ 0.36
HIF3A-210ENST00000526506 STXBP3O00186 592 aa17.31■□□□□ 0.36
HIF3A-210ENST00000526506 CPLX1O14810 134 aa17.31■□□□□ 0.36
HIF3A-210ENST00000526506 NEK4P51957 841 aa17.31■□□□□ 0.36
HIF3A-210ENST00000526506 AK2P54819 239 aa17.31■□□□□ 0.36
HIF3A-210ENST00000526506 STK3Q13188 491 aa17.31■□□□□ 0.36
HIF3A-210ENST00000526506 TYW1BQ6NUM6 668 aa17.31■□□□□ 0.36
HIF3A-210ENST00000526506 CPLX2Q6PUV4 134 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms