RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 CCDC17Q96LX7 622 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 FUCA2Q9BTY2 467 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 SPZ1Q9BXG8 430 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 OXCT2Q9BYC2 517 aaPredicted RBP7.86□□□□□ -1.15
CSMD1-211ENST00000523062 TMOD2Q9NZR1 351 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 PIM2Q9P1W9 311 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 MAD2L2Q9UI95 211 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 HDAC9Q9UKV0 1011 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 MORC2Q9Y6X9 1032 aaPredicted RBP7.86□□□□□ -1.15
CSMD1-211ENST00000523062 PSME4Q14997 1843 aa7.86□□□□□ -1.15
CSMD1-211ENST00000523062 hCG_1642624A0A1W2PR95 340 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 PALM3A6NDB9 673 aaPredicted RBP7.85□□□□□ -1.15
CSMD1-211ENST00000523062 TRIM75PA6NK02 468 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 PIK3R2O00459 728 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 ENTPD3O75355 529 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 ZBTB7AO95365 584 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 AKR1B1P15121 316 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 RHOQP17081 205 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 CMA1P23946 247 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 SMARCA1P28370 1054 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 MARCKSP29966 332 aaPredicted RBP7.85□□□□□ -1.15
CSMD1-211ENST00000523062 SHMT1P34896 483 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 MAP2K3P46734 347 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 RNF144AP50876 292 aaPredicted RBP7.85□□□□□ -1.15
CSMD1-211ENST00000523062 NLRP5P59047 1200 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 TYRO3Q06418 890 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 CAMK4Q16566 473 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 CFAP100Q494V2 611 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 ASPRV1Q53RT3 343 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 DALRD3Q5D0E6 543 aaKnown RBP7.85□□□□□ -1.15
CSMD1-211ENST00000523062 AXDND1Q5T1B0 1012 aaPredicted RBP7.85□□□□□ -1.15
CSMD1-211ENST00000523062 STAG2Q8N3U4 1231 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 ZNF784Q8NCA9 323 aaPredicted RBP7.85□□□□□ -1.15
CSMD1-211ENST00000523062 RNF214Q8ND24 703 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 SHISA4Q96DD7 197 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 PPP1R9BQ96SB3 815 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 TRIM34Q9BYJ4 488 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 KRTAP9-9Q9BYP9 154 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 KRTAP9-4Q9BYQ2 154 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 SEMA6BQ9H3T3 888 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 ZNF277Q9NRM2 450 aaPredicted RBP7.85□□□□□ -1.15
CSMD1-211ENST00000523062 MTMR4Q9NYA4 1195 aa7.85□□□□□ -1.15
CSMD1-211ENST00000523062 ATRNL1Q5VV63 1379 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 FAM237AA0A1B0GTK4 181 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 C1QTNF9BB2RNN3 333 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 KLRF2D3W0D1 207 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 PSMD14O00487 310 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 CAVIN2O95810 425 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 TTLL1O95922 423 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 VIL1P09327 827 aaKnown RBP7.84□□□□□ -1.15
CSMD1-211ENST00000523062 PFKFB1P16118 471 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 ITGB7P26010 798 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 TRAPPC10P48553 1259 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 TOB1P50616 345 aaPredicted RBP7.84□□□□□ -1.15
CSMD1-211ENST00000523062 TCP10Q12799 353 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 SNW1Q13573 536 aaKnown RBP7.84□□□□□ -1.15
CSMD1-211ENST00000523062 NPY5RQ15761 445 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 GALNT17Q6IS24 598 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 SASS6Q6UVJ0 657 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 FOXP4Q8IVH2 680 aaPredicted RBP7.84□□□□□ -1.15
CSMD1-211ENST00000523062 ZSCAN29Q8IWY8 852 aaPredicted RBP7.84□□□□□ -1.15
CSMD1-211ENST00000523062 CKAP2LQ8IYA6 745 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 FMR1NBQ8N0W7 255 aaPredicted RBP7.84□□□□□ -1.15
CSMD1-211ENST00000523062 DAGLBQ8NCG7 672 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 FAM200AQ8TCP9 573 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 CCDC12Q8WUD4 166 aaPredicted RBP7.84□□□□□ -1.15
CSMD1-211ENST00000523062 TNFRSF25Q93038 417 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 RRP36Q96EU6 259 aaKnown RBP7.84□□□□□ -1.15
CSMD1-211ENST00000523062 GMLQ99445 158 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 OCSTAMPQ9BR26 566 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 RRAGCQ9HB90 399 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 PI4KBQ9UBF8 816 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 ZNRF3Q9ULT6 936 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 MTMR7Q9Y216 660 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 DYRK1BQ9Y463 629 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 PCDHAC2Q9Y5I4 1007 aa7.84□□□□□ -1.15
CSMD1-211ENST00000523062 A0A1B0GVL5 298 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 DDTLA6NHG4 134 aaPredicted RBP7.83□□□□□ -1.16
CSMD1-211ENST00000523062 hCG_1984214I3L0E3 225 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 MPHOSPH10O00566 681 aaKnown RBP7.83□□□□□ -1.16
CSMD1-211ENST00000523062 RAD17O75943 681 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 SNHG28P0DPA3 235 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 PDHBP11177 359 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 NDUFA8P51970 172 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 CACNB3P54284 484 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 GRIN2CQ14957 1233 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 DLGAP5Q15398 846 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 STX1AQ16623 288 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 SLC35G1Q2M3R5 365 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 RESP18Q5W5W9 173 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 WWC2Q6AWC2 1192 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 HEATR3Q7Z4Q2 680 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 PARP9Q8IXQ6 854 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 BLIDQ8IZY5 108 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 LRRC47Q8N1G4 583 aaKnown RBP7.83□□□□□ -1.16
CSMD1-211ENST00000523062 OGFOD1Q8N543 542 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 ZNF713Q8N859 430 aaPredicted RBP7.83□□□□□ -1.16
CSMD1-211ENST00000523062 AGBL3Q8NEM8 1001 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 PIBF1Q8WXW3 757 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 TIGD1Q96MW7 591 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms