RNA–Protein interactions for RNA: ENST00000522321.5

SPIDR-219, Transcript of scaffold protein involved in DNA repair, human

TSL 4

Gene SPIDR, Length 760 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-219	ENST00000522321	CEBPZ	Q03701	1054 aa	Known RBP	14.01	□□□□□ -0.17
SPIDR-219	ENST00000522321	KIF22	Q14807	665 aa		14.01	□□□□□ -0.17
SPIDR-219	ENST00000522321	STK38	Q15208	465 aa		14.01	□□□□□ -0.17
SPIDR-219	ENST00000522321	SF3A1	Q15459	793 aa	Known RBP	14.01	□□□□□ -0.17
SPIDR-219	ENST00000522321	ATL3	Q6DD88	541 aa		14.01	□□□□□ -0.17
SPIDR-219	ENST00000522321	C17orf99	Q6UX52	265 aa		14.01	□□□□□ -0.17
SPIDR-219	ENST00000522321	PLEKHH3	Q7Z736	793 aa		14.01	□□□□□ -0.17
SPIDR-219	ENST00000522321	TBC1D5	Q92609	795 aa		14.01	□□□□□ -0.17
SPIDR-219	ENST00000522321	RMDN3	Q96TC7	470 aa		14.01	□□□□□ -0.17
SPIDR-219	ENST00000522321	SLC5A4	Q9NY91	659 aa		14.01	□□□□□ -0.17
SPIDR-219	ENST00000522321	MYH6	P13533	1939 aa		14.01	□□□□□ -0.17
SPIDR-219	ENST00000522321	PARP14	Q460N5	1801 aa		14.01	□□□□□ -0.17
SPIDR-219	ENST00000522321	TNPO2	O14787	897 aa	Known RBP	14	□□□□□ -0.17
SPIDR-219	ENST00000522321	ADAMTS3	O15072	1205 aa		14	□□□□□ -0.17
SPIDR-219	ENST00000522321	MARCH6	O60337	910 aa		14	□□□□□ -0.17
SPIDR-219	ENST00000522321	CCNT1	O60563	726 aa	Known RBP	14	□□□□□ -0.17
SPIDR-219	ENST00000522321	TBC1D8	O95759	1140 aa		14	□□□□□ -0.17
SPIDR-219	ENST00000522321	BMP15	O95972	392 aa		14	□□□□□ -0.17
SPIDR-219	ENST00000522321	EIF2AK2	P19525	551 aa	Known RBP	14	□□□□□ -0.17
SPIDR-219	ENST00000522321	SREBF1	P36956	1147 aa		14	□□□□□ -0.17
SPIDR-219	ENST00000522321	FCGRT	P55899	365 aa		14	□□□□□ -0.17
SPIDR-219	ENST00000522321	SOX10	P56693	466 aa		14	□□□□□ -0.17
SPIDR-219	ENST00000522321	ARHGAP4	P98171	946 aa		14	□□□□□ -0.17
SPIDR-219	ENST00000522321	EARS2	Q5JPH6	523 aa	Known RBP	14	□□□□□ -0.17
SPIDR-219	ENST00000522321	GPR142	Q7Z601	462 aa		14	□□□□□ -0.17
SPIDR-219	ENST00000522321	NSUN6	Q8TEA1	469 aa	Known RBP	14	□□□□□ -0.17
SPIDR-219	ENST00000522321	RNF186	Q9NXI6	227 aa		14	□□□□□ -0.17
SPIDR-219	ENST00000522321	SAGE1	Q9NXZ1	904 aa		14	□□□□□ -0.17
SPIDR-219	ENST00000522321	RLF	Q13129	1914 aa		14	□□□□□ -0.17
SPIDR-219	ENST00000522321	STRN	O43815	780 aa		13.99	□□□□□ -0.17
SPIDR-219	ENST00000522321	GCFC2	P16383	781 aa	Known RBP	13.99	□□□□□ -0.17
SPIDR-219	ENST00000522321	CCND2	P30279	289 aa		13.99	□□□□□ -0.17
SPIDR-219	ENST00000522321	MCM7	P33993	719 aa		13.99	□□□□□ -0.17
SPIDR-219	ENST00000522321	UBXN2A	P68543	259 aa		13.99	□□□□□ -0.17
SPIDR-219	ENST00000522321	NOM1	Q5C9Z4	860 aa	Known RBP	13.99	□□□□□ -0.17
SPIDR-219	ENST00000522321	ANO1	Q5XXA6	986 aa		13.99	□□□□□ -0.17
SPIDR-219	ENST00000522321	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
SPIDR-219	ENST00000522321	DPP9	Q86TI2	863 aa		13.99	□□□□□ -0.17
SPIDR-219	ENST00000522321	ABRA	Q8N0Z2	381 aa		13.99	□□□□□ -0.17
SPIDR-219	ENST00000522321	SOCS4	Q8WXH5	440 aa		13.99	□□□□□ -0.17
SPIDR-219	ENST00000522321	SPATA32	Q96LK8	384 aa		13.99	□□□□□ -0.17
SPIDR-219	ENST00000522321	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.99	□□□□□ -0.17
SPIDR-219	ENST00000522321	PXMP2	Q9NR77	195 aa		13.99	□□□□□ -0.17
SPIDR-219	ENST00000522321	COL20A1	Q9P218	1284 aa		13.99	□□□□□ -0.17
SPIDR-219	ENST00000522321	CNPY2	Q9Y2B0	182 aa		13.99	□□□□□ -0.17
SPIDR-219	ENST00000522321	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.98	□□□□□ -0.17
SPIDR-219	ENST00000522321	NEMF	O60524	1076 aa		13.98	□□□□□ -0.17
SPIDR-219	ENST00000522321	BAG4	O95429	457 aa	Known RBP	13.98	□□□□□ -0.17
SPIDR-219	ENST00000522321	PGK2	P07205	417 aa		13.98	□□□□□ -0.17
SPIDR-219	ENST00000522321	MYCL	P12524	364 aa	Predicted RBP	13.98	□□□□□ -0.17
SPIDR-219	ENST00000522321	PTPRE	P23469	700 aa		13.98	□□□□□ -0.17
SPIDR-219	ENST00000522321	ADORA2A	P29274	412 aa		13.98	□□□□□ -0.17
SPIDR-219	ENST00000522321	ORC2	Q13416	577 aa	Predicted RBP	13.98	□□□□□ -0.17
SPIDR-219	ENST00000522321	NBR1	Q14596	966 aa		13.98	□□□□□ -0.17
SPIDR-219	ENST00000522321	ZNF174	Q15697	407 aa		13.98	□□□□□ -0.17
SPIDR-219	ENST00000522321	DNER	Q8NFT8	737 aa		13.98	□□□□□ -0.17
SPIDR-219	ENST00000522321	TAAR1	Q96RJ0	339 aa		13.98	□□□□□ -0.17
SPIDR-219	ENST00000522321	USP28	Q96RU2	1077 aa		13.98	□□□□□ -0.17
SPIDR-219	ENST00000522321	POLR3E	Q9NVU0	708 aa		13.98	□□□□□ -0.17
SPIDR-219	ENST00000522321	TFIP11	Q9UBB9	837 aa	Known RBP	13.98	□□□□□ -0.17
SPIDR-219	ENST00000522321	DDX25	Q9UHL0	483 aa	Known RBP	13.98	□□□□□ -0.17
SPIDR-219	ENST00000522321	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.98	□□□□□ -0.17
SPIDR-219	ENST00000522321	RPTOR	Q8N122	1335 aa		13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	GOLGA6L4	A6NEF3	574 aa		13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	SLC15A5	A6NIM6	579 aa		13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	YEATS4	O95619	227 aa		13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	ALDH5A1	P51649	535 aa	Predicted RBP	13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	USP11	P51784	963 aa		13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	SET	Q01105	290 aa	Predicted RBP	13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	SP3	Q02447	781 aa		13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	PDE4D	Q08499	809 aa		13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	GRB14	Q14449	540 aa		13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	PGM5	Q15124	567 aa		13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	XRRA1	Q6P2D8	792 aa		13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	KCNG4	Q8TDN1	519 aa		13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	NUDT12	Q9BQG2	462 aa		13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	PDCD2L	Q9BRP1	358 aa		13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	CFHR5	Q9BXR6	569 aa		13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	RTEL1	Q9NZ71	1219 aa		13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	PCDHB6	Q9Y5E3	794 aa		13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	CLIC4	Q9Y696	253 aa		13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	COL11A1	P12107	1806 aa	Predicted RBP	13.97	□□□□□ -0.17
SPIDR-219	ENST00000522321	FRMPD4	Q14CM0	1322 aa		13.96	□□□□□ -0.17
SPIDR-219	ENST00000522321	TDP2	O95551	362 aa		13.96	□□□□□ -0.17
SPIDR-219	ENST00000522321	RGS2	P41220	211 aa		13.96	□□□□□ -0.17
SPIDR-219	ENST00000522321	ME1	P48163	572 aa		13.96	□□□□□ -0.17
SPIDR-219	ENST00000522321	TOB1	P50616	345 aa	Predicted RBP	13.96	□□□□□ -0.17
SPIDR-219	ENST00000522321	LACTB	P83111	547 aa	Predicted RBP	13.96	□□□□□ -0.17
SPIDR-219	ENST00000522321	CNTN2	Q02246	1040 aa		13.96	□□□□□ -0.17
SPIDR-219	ENST00000522321	ARHGEF6	Q15052	776 aa		13.96	□□□□□ -0.17
SPIDR-219	ENST00000522321	GNPTAB	Q3T906	1256 aa		13.96	□□□□□ -0.17
SPIDR-219	ENST00000522321	PCNX4	Q63HM2	1172 aa		13.96	□□□□□ -0.17
SPIDR-219	ENST00000522321	MOXD1	Q6UVY6	613 aa		13.96	□□□□□ -0.17
SPIDR-219	ENST00000522321	CTU1	Q7Z7A3	348 aa	Known RBP	13.96	□□□□□ -0.17
SPIDR-219	ENST00000522321	CHAMP1	Q96JM3	812 aa		13.96	□□□□□ -0.17
SPIDR-219	ENST00000522321	PURB	Q96QR8	312 aa	Known RBP	13.96	□□□□□ -0.17
SPIDR-219	ENST00000522321	IWS1	Q96ST2	819 aa		13.96	□□□□□ -0.17
SPIDR-219	ENST00000522321	TCEAL9	Q9UHQ7	104 aa		13.96	□□□□□ -0.17
SPIDR-219	ENST00000522321	ASB14	A6NK59	587 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms