RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 CYP2C18P33260 490 aa13.21□□□□□ -0.29
CSMD1-210ENST00000521646 USP46P62068 366 aa13.21□□□□□ -0.29
CSMD1-210ENST00000521646 NKX3-2P78367 333 aa13.21□□□□□ -0.29
CSMD1-210ENST00000521646 MFSD5Q6N075 450 aa13.21□□□□□ -0.29
CSMD1-210ENST00000521646 GIMAP6Q6P9H5 292 aa13.21□□□□□ -0.29
CSMD1-210ENST00000521646 IFNL3Q8IZI9 196 aa13.21□□□□□ -0.29
CSMD1-210ENST00000521646 MSL3Q8N5Y2 521 aaKnown RBP13.21□□□□□ -0.29
CSMD1-210ENST00000521646 GMCL1P1Q8NEA9 526 aa13.21□□□□□ -0.29
CSMD1-210ENST00000521646 PPP1R13LQ8WUF5 828 aa13.21□□□□□ -0.29
CSMD1-210ENST00000521646 DDX11Q96FC9 970 aa13.21□□□□□ -0.29
CSMD1-210ENST00000521646 ZNF576Q9H609 170 aa13.21□□□□□ -0.29
CSMD1-210ENST00000521646 MKNK2Q9HBH9 465 aa13.21□□□□□ -0.29
CSMD1-210ENST00000521646 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.21□□□□□ -0.29
CSMD1-210ENST00000521646 YBX2Q9Y2T7 364 aaKnown RBP13.21□□□□□ -0.29
CSMD1-210ENST00000521646 PCDHB15Q9Y5E8 787 aa13.21□□□□□ -0.29
CSMD1-210ENST00000521646 ARVCFO00192 962 aa13.2□□□□□ -0.3
CSMD1-210ENST00000521646 SMPD1P17405 629 aa13.2□□□□□ -0.3
CSMD1-210ENST00000521646 VPS53Q5VIR6 699 aa13.2□□□□□ -0.3
CSMD1-210ENST00000521646 DIEXFQ68CQ4 756 aaKnown RBP13.2□□□□□ -0.3
CSMD1-210ENST00000521646 SLFN13Q68D06 897 aa13.2□□□□□ -0.3
CSMD1-210ENST00000521646 TAPT1Q6NXT6 567 aa13.2□□□□□ -0.3
CSMD1-210ENST00000521646 CXCL17Q6UXB2 119 aa13.2□□□□□ -0.3
CSMD1-210ENST00000521646 ZNF365Q70YC5 407 aa13.2□□□□□ -0.3
CSMD1-210ENST00000521646 SLC43A3Q8NBI5 491 aa13.2□□□□□ -0.3
CSMD1-210ENST00000521646 NEDD1Q8NHV4 660 aa13.2□□□□□ -0.3
CSMD1-210ENST00000521646 WNT8AQ9H1J5 351 aa13.2□□□□□ -0.3
CSMD1-210ENST00000521646 RAPGEFL1Q9UHV5 662 aa13.2□□□□□ -0.3
CSMD1-210ENST00000521646 ELP1O95163 1332 aa13.19□□□□□ -0.3
CSMD1-210ENST00000521646 SALL3Q9BXA9 1300 aa13.19□□□□□ -0.3
CSMD1-210ENST00000521646 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.19□□□□□ -0.3
CSMD1-210ENST00000521646 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.19□□□□□ -0.3
CSMD1-210ENST00000521646 DCDC2CA8MYV0 355 aa13.19□□□□□ -0.3
CSMD1-210ENST00000521646 TMEM232C9JQI7 657 aa13.19□□□□□ -0.3
CSMD1-210ENST00000521646 COPB2P35606 906 aa13.19□□□□□ -0.3
CSMD1-210ENST00000521646 PSMC6P62333 389 aa13.19□□□□□ -0.3
CSMD1-210ENST00000521646 CTDSPL2Q05D32 466 aa13.19□□□□□ -0.3
CSMD1-210ENST00000521646 LAPTM4AQ15012 233 aa13.19□□□□□ -0.3
CSMD1-210ENST00000521646 GNASQ5JWF2 1037 aa13.19□□□□□ -0.3
CSMD1-210ENST00000521646 ZSCAN25Q6NSZ9 544 aa13.19□□□□□ -0.3
CSMD1-210ENST00000521646 RNF19BQ6ZMZ0 732 aa13.19□□□□□ -0.3
CSMD1-210ENST00000521646 Q6ZNB5 142 aa13.19□□□□□ -0.3
CSMD1-210ENST00000521646 KCTD1Q719H9 257 aa13.19□□□□□ -0.3
CSMD1-210ENST00000521646 AMOTL1Q8IY63 956 aa13.19□□□□□ -0.3
CSMD1-210ENST00000521646 ANKRD35Q8N283 1001 aa13.19□□□□□ -0.3
CSMD1-210ENST00000521646 FAM160A2Q8N612 972 aaPredicted RBP13.19□□□□□ -0.3
CSMD1-210ENST00000521646 TIFAQ96CG3 184 aa13.19□□□□□ -0.3
CSMD1-210ENST00000521646 ABHD16BQ9H3Z7 469 aa13.19□□□□□ -0.3
CSMD1-210ENST00000521646 PRDM12Q9H4Q4 367 aa13.19□□□□□ -0.3
CSMD1-210ENST00000521646 FEM1BQ9UK73 627 aa13.19□□□□□ -0.3
CSMD1-210ENST00000521646 SCN5AQ14524 2016 aa13.18□□□□□ -0.3
CSMD1-210ENST00000521646 TMEM265A0A087WTH1 108 aa13.18□□□□□ -0.3
CSMD1-210ENST00000521646 PATL2C9JE40 543 aaKnown RBP13.18□□□□□ -0.3
CSMD1-210ENST00000521646 ZBED4O75132 1171 aa13.18□□□□□ -0.3
CSMD1-210ENST00000521646 TTLL1O95922 423 aa13.18□□□□□ -0.3
CSMD1-210ENST00000521646 BMP3P12645 472 aa13.18□□□□□ -0.3
CSMD1-210ENST00000521646 MYOGP15173 224 aa13.18□□□□□ -0.3
CSMD1-210ENST00000521646 MCCP23508 829 aa13.18□□□□□ -0.3
CSMD1-210ENST00000521646 TDO2P48775 406 aa13.18□□□□□ -0.3
CSMD1-210ENST00000521646 TFAP4Q01664 338 aa13.18□□□□□ -0.3
CSMD1-210ENST00000521646 PPARAQ07869 468 aa13.18□□□□□ -0.3
CSMD1-210ENST00000521646 ZMYM1Q5SVZ6 1142 aa13.18□□□□□ -0.3
CSMD1-210ENST00000521646 TTBK2Q6IQ55 1244 aa13.18□□□□□ -0.3
CSMD1-210ENST00000521646 EEPD1Q7L9B9 569 aa13.18□□□□□ -0.3
CSMD1-210ENST00000521646 FBXO16Q8IX29 292 aaPredicted RBP13.18□□□□□ -0.3
CSMD1-210ENST00000521646 NUP133Q8WUM0 1156 aa13.18□□□□□ -0.3
CSMD1-210ENST00000521646 DDRGK1Q96HY6 314 aa13.18□□□□□ -0.3
CSMD1-210ENST00000521646 TRPV6Q9H1D0 765 aa13.18□□□□□ -0.3
CSMD1-210ENST00000521646 RNF146Q9NTX7 359 aa13.18□□□□□ -0.3
CSMD1-210ENST00000521646 A0A0U1RQG5 324 aaPredicted RBP13.17□□□□□ -0.3
CSMD1-210ENST00000521646 B4GALT4O60513 344 aa13.17□□□□□ -0.3
CSMD1-210ENST00000521646 ARHGEF15O94989 841 aa13.17□□□□□ -0.3
CSMD1-210ENST00000521646 MS4A1P11836 297 aa13.17□□□□□ -0.3
CSMD1-210ENST00000521646 NOVP48745 357 aa13.17□□□□□ -0.3
CSMD1-210ENST00000521646 RABGGTBP53611 331 aa13.17□□□□□ -0.3
CSMD1-210ENST00000521646 OAZ1P54368 228 aa13.17□□□□□ -0.3
CSMD1-210ENST00000521646 AMHR2Q16671 573 aa13.17□□□□□ -0.3
CSMD1-210ENST00000521646 CCDC174Q6PII3 467 aa13.17□□□□□ -0.3
CSMD1-210ENST00000521646 LIAT1Q6ZQX7 453 aa13.17□□□□□ -0.3
CSMD1-210ENST00000521646 CHST13Q8NET6 341 aa13.17□□□□□ -0.3
CSMD1-210ENST00000521646 HLA-CQ95604 372 aa13.17□□□□□ -0.3
CSMD1-210ENST00000521646 GLT1D1Q96MS3 346 aa13.17□□□□□ -0.3
CSMD1-210ENST00000521646 PRR12Q9ULL5 1215 aa13.17□□□□□ -0.3
CSMD1-210ENST00000521646 TRIM66O15016 1216 aa13.16□□□□□ -0.3
CSMD1-210ENST00000521646 APPP05067 770 aa13.16□□□□□ -0.3
CSMD1-210ENST00000521646 CCL23P55773 120 aa13.16□□□□□ -0.3
CSMD1-210ENST00000521646 TNFAIP2Q03169 654 aa13.16□□□□□ -0.3
CSMD1-210ENST00000521646 SPRED2Q7Z698 418 aa13.16□□□□□ -0.3
CSMD1-210ENST00000521646 TLK2Q86UE8 772 aa13.16□□□□□ -0.3
CSMD1-210ENST00000521646 ZNF444Q8N0Y2 327 aaPredicted RBP13.16□□□□□ -0.3
CSMD1-210ENST00000521646 PPM1EQ8WY54 764 aa13.16□□□□□ -0.3
CSMD1-210ENST00000521646 GMCL1Q96IK5 515 aa13.16□□□□□ -0.3
CSMD1-210ENST00000521646 NOC4LQ9BVI4 516 aaKnown RBP13.16□□□□□ -0.3
CSMD1-210ENST00000521646 NKX2-4Q9H2Z4 354 aa13.16□□□□□ -0.3
CSMD1-210ENST00000521646 ACAD9Q9H845 621 aa13.16□□□□□ -0.3
CSMD1-210ENST00000521646 CYP39A1Q9NYL5 469 aa13.16□□□□□ -0.3
CSMD1-210ENST00000521646 PTPRSQ13332 1948 aa13.15□□□□□ -0.3
CSMD1-210ENST00000521646 NFIBO00712 420 aa13.15□□□□□ -0.3
CSMD1-210ENST00000521646 HOXA2O43364 376 aa13.15□□□□□ -0.3
CSMD1-210ENST00000521646 TSPY3P0CV98 308 aa13.15□□□□□ -0.3
CSMD1-210ENST00000521646 TSPY8P0CW00 308 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms