RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 MICU3Q86XE3 530 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 SCFD2Q8WU76 684 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 CCDC12Q8WUD4 166 aaPredicted RBP10.91□□□□□ -0.66
CLK4-209ENST00000521621 MYL10Q9BUA6 226 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 VAT1LQ9HCJ6 419 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 XPNPEP3Q9NQH7 507 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 ELP1O95163 1332 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 SYNRGQ9UMZ2 1314 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 MEIS2O14770 477 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 ECM2O94769 699 aaPredicted RBP10.91□□□□□ -0.66
CLK4-209ENST00000521621 HOXD8P13378 290 aaPredicted RBP10.91□□□□□ -0.66
CLK4-209ENST00000521621 TAL1P17542 331 aaPredicted RBP10.91□□□□□ -0.66
CLK4-209ENST00000521621 TNFAIP2Q03169 654 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 PDE4DQ08499 809 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 APOBRQ0VD83 1088 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 AP3B2Q13367 1082 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 PCNX4Q63HM2 1172 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 PDCD2LQ9BRP1 358 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 LRRC2Q9BYS8 371 aa10.91□□□□□ -0.66
CLK4-209ENST00000521621 MCM3APO60318 1980 aa10.9□□□□□ -0.66
CLK4-209ENST00000521621 KBTBD13C9JR72 458 aa10.9□□□□□ -0.66
CLK4-209ENST00000521621 STXBP3O00186 592 aa10.9□□□□□ -0.66
CLK4-209ENST00000521621 CALML3P27482 149 aa10.9□□□□□ -0.66
CLK4-209ENST00000521621 PGM5Q15124 567 aa10.9□□□□□ -0.66
CLK4-209ENST00000521621 GALNT17Q6IS24 598 aa10.9□□□□□ -0.66
CLK4-209ENST00000521621 SLC43A3Q8NBI5 491 aa10.9□□□□□ -0.66
CLK4-209ENST00000521621 CUL5Q93034 780 aa10.9□□□□□ -0.66
CLK4-209ENST00000521621 TAAR1Q96RJ0 339 aa10.9□□□□□ -0.66
CLK4-209ENST00000521621 RMDN3Q96TC7 470 aa10.9□□□□□ -0.66
CLK4-209ENST00000521621 ZMYND12Q9H0C1 365 aa10.9□□□□□ -0.66
CLK4-209ENST00000521621 SPC25Q9HBM1 224 aa10.9□□□□□ -0.66
CLK4-209ENST00000521621 MAFGO15525 162 aa10.9□□□□□ -0.66
CLK4-209ENST00000521621 CAPN15O75808 1086 aa10.9□□□□□ -0.66
CLK4-209ENST00000521621 CCND2P30279 289 aa10.9□□□□□ -0.66
CLK4-209ENST00000521621 PRAMEF19Q5SWL8 479 aa10.9□□□□□ -0.66
CLK4-209ENST00000521621 EHMT1Q9H9B1 1298 aa10.9□□□□□ -0.66
CLK4-209ENST00000521621 ZEB2O60315 1214 aa10.89□□□□□ -0.67
CLK4-209ENST00000521621 CDKL5O76039 1030 aa10.89□□□□□ -0.67
CLK4-209ENST00000521621 NR3C2P08235 984 aa10.89□□□□□ -0.67
CLK4-209ENST00000521621 SCG2P13521 617 aa10.89□□□□□ -0.67
CLK4-209ENST00000521621 FGD1P98174 961 aa10.89□□□□□ -0.67
CLK4-209ENST00000521621 PKN1Q16512 942 aa10.89□□□□□ -0.67
CLK4-209ENST00000521621 NIPA1Q7RTP0 329 aa10.89□□□□□ -0.67
CLK4-209ENST00000521621 DAGLBQ8NCG7 672 aa10.89□□□□□ -0.67
CLK4-209ENST00000521621 TOX2Q96NM4 488 aa10.89□□□□□ -0.67
CLK4-209ENST00000521621 LTBP2Q14767 1821 aa10.89□□□□□ -0.67
CLK4-209ENST00000521621 SMPD1P17405 629 aa10.89□□□□□ -0.67
CLK4-209ENST00000521621 PTPN11Q06124 597 aaPredicted RBP10.89□□□□□ -0.67
CLK4-209ENST00000521621 TTLL4Q14679 1199 aa10.89□□□□□ -0.67
CLK4-209ENST00000521621 PRPF38BQ5VTL8 546 aaKnown RBP10.89□□□□□ -0.67
CLK4-209ENST00000521621 ARHGEF16Q5VV41 709 aa10.89□□□□□ -0.67
CLK4-209ENST00000521621 WWC2Q6AWC2 1192 aa10.89□□□□□ -0.67
CLK4-209ENST00000521621 TBC1D5Q92609 795 aa10.89□□□□□ -0.67
CLK4-209ENST00000521621 PAWRQ96IZ0 340 aaKnown RBP10.89□□□□□ -0.67
CLK4-209ENST00000521621 INPP4AQ96PE3 977 aaPredicted RBP10.89□□□□□ -0.67
CLK4-209ENST00000521621 PSTPIP2Q9H939 334 aa10.89□□□□□ -0.67
CLK4-209ENST00000521621 POLR3EQ9NVU0 708 aa10.89□□□□□ -0.67
CLK4-209ENST00000521621 ZHX1Q9UKY1 873 aaPredicted RBP10.89□□□□□ -0.67
CLK4-209ENST00000521621 HTTP42858 3142 aa10.89□□□□□ -0.67
CLK4-209ENST00000521621 A6NJR5 290 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 ADCY6O43306 1168 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 CPA1P15085 419 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 CNGA1P29973 690 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 CPLX2Q6PUV4 134 aaKnown RBP10.88□□□□□ -0.67
CLK4-209ENST00000521621 ANKRD33Q7Z3H0 272 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 HOMER1Q86YM7 354 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 CCDC148Q8NFR7 591 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 BICD2Q8TD16 824 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 CRYGNQ8WXF5 182 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 MROH7Q68CQ1 1323 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 SEC24BO95487 1268 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 CFBP00751 764 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 CYP3A4P08684 503 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 SLC4A3P48751 1232 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 CPT1AP50416 773 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 SLC39A5Q6ZMH5 540 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 GIMAP8Q8ND71 665 aaPredicted RBP10.88□□□□□ -0.67
CLK4-209ENST00000521621 GPRASP2Q96D09 838 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 CDHR1Q96JP9 859 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 TCEANC2Q96MN5 208 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 KIF2CQ99661 725 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 SENP7Q9BQF6 1050 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 DEXIO95424 95 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 ADD1P35611 737 aaKnown RBP10.88□□□□□ -0.67
CLK4-209ENST00000521621 CDK7P50613 346 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 WDR11Q9BZH6 1224 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 AP5M1Q9H0R1 490 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 DDX41Q9UJV9 622 aaKnown RBP10.88□□□□□ -0.67
CLK4-209ENST00000521621 NR2E3Q9Y5X4 410 aa10.88□□□□□ -0.67
CLK4-209ENST00000521621 V9GY48 417 aaPredicted RBP10.88□□□□□ -0.67
CLK4-209ENST00000521621 A0A1W2PPC1 479 aa10.87□□□□□ -0.67
CLK4-209ENST00000521621 SPATA31C2B4DYI2 1134 aa10.87□□□□□ -0.67
CLK4-209ENST00000521621 GNA11P29992 359 aa10.87□□□□□ -0.67
CLK4-209ENST00000521621 ADCYAP1R1P41586 468 aa10.87□□□□□ -0.67
CLK4-209ENST00000521621 ADCY7P51828 1080 aa10.87□□□□□ -0.67
CLK4-209ENST00000521621 ACLYP53396 1101 aa10.87□□□□□ -0.67
CLK4-209ENST00000521621 TLK2Q86UE8 772 aa10.87□□□□□ -0.67
CLK4-209ENST00000521621 SESTD1Q86VW0 696 aa10.87□□□□□ -0.67
CLK4-209ENST00000521621 FBXO16Q8IX29 292 aaPredicted RBP10.87□□□□□ -0.67
CLK4-209ENST00000521621 SMARCC2Q8TAQ2 1214 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms