RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 HOXA13P31271 388 aaPredicted RBP15.85■□□□□ 0.13
CTNNA1-226ENST00000521368 GJA8P48165 433 aa15.85■□□□□ 0.13
CTNNA1-226ENST00000521368 NECAB1Q8N987 351 aa15.85■□□□□ 0.13
CTNNA1-226ENST00000521368 CCDC148Q8NFR7 591 aa15.85■□□□□ 0.13
CTNNA1-226ENST00000521368 SMARCC2Q8TAQ2 1214 aa15.85■□□□□ 0.13
CTNNA1-226ENST00000521368 KATNBL1Q9H079 304 aa15.85■□□□□ 0.13
CTNNA1-226ENST00000521368 ZMYND12Q9H0C1 365 aa15.85■□□□□ 0.13
CTNNA1-226ENST00000521368 VTA1Q9NP79 307 aa15.85■□□□□ 0.13
CTNNA1-226ENST00000521368 RIC8AQ9NPQ8 531 aa15.85■□□□□ 0.13
CTNNA1-226ENST00000521368 PXMP2Q9NR77 195 aa15.85■□□□□ 0.13
CTNNA1-226ENST00000521368 MCM3APO60318 1980 aa15.85■□□□□ 0.13
CTNNA1-226ENST00000521368 FRMPD4Q14CM0 1322 aa15.85■□□□□ 0.13
CTNNA1-226ENST00000521368 FRMPD3Q5JV73 1810 aa15.84■□□□□ 0.13
CTNNA1-226ENST00000521368 CTDNEP1O95476 244 aa15.84■□□□□ 0.13
CTNNA1-226ENST00000521368 MYCP01106 439 aaPredicted RBP15.84■□□□□ 0.13
CTNNA1-226ENST00000521368 ADCY7P51828 1080 aa15.84■□□□□ 0.13
CTNNA1-226ENST00000521368 PDE4DQ08499 809 aa15.84■□□□□ 0.13
CTNNA1-226ENST00000521368 ST3GAL1Q11201 340 aa15.84■□□□□ 0.13
CTNNA1-226ENST00000521368 ACVR2BQ13705 512 aa15.84■□□□□ 0.13
CTNNA1-226ENST00000521368 PRAMEF19Q5SWL8 479 aa15.84■□□□□ 0.13
CTNNA1-226ENST00000521368 ARHGEF16Q5VV41 709 aa15.84■□□□□ 0.13
CTNNA1-226ENST00000521368 USP17L6PQ6QN14 398 aa15.84■□□□□ 0.13
CTNNA1-226ENST00000521368 PDCD2LQ9BRP1 358 aa15.84■□□□□ 0.13
CTNNA1-226ENST00000521368 CRISPLD2Q9H0B8 497 aa15.84■□□□□ 0.13
CTNNA1-226ENST00000521368 DDX20Q9UHI6 824 aaKnown RBP15.84■□□□□ 0.13
CTNNA1-226ENST00000521368 SMCO2A6NFE2 343 aa15.83■□□□□ 0.12
CTNNA1-226ENST00000521368 PPFIA3O75145 1194 aa15.83■□□□□ 0.12
CTNNA1-226ENST00000521368 SGPL1O95470 568 aa15.83■□□□□ 0.12
CTNNA1-226ENST00000521368 AKR1A1P14550 325 aa15.83■□□□□ 0.12
CTNNA1-226ENST00000521368 CNGA1P29973 690 aa15.83■□□□□ 0.12
CTNNA1-226ENST00000521368 MCTP2Q6DN12 878 aa15.83■□□□□ 0.12
CTNNA1-226ENST00000521368 NSUN7Q8NE18 718 aaKnown RBP15.83■□□□□ 0.12
CTNNA1-226ENST00000521368 U2AF1L4Q8WU68 220 aaKnown RBP15.83■□□□□ 0.12
CTNNA1-226ENST00000521368 WASF1Q92558 559 aa15.83■□□□□ 0.12
CTNNA1-226ENST00000521368 DEFB118Q96PH6 123 aa15.83■□□□□ 0.12
CTNNA1-226ENST00000521368 LLPHQ9BRT6 129 aaKnown RBP15.83■□□□□ 0.12
CTNNA1-226ENST00000521368 C6orf50Q9HD87 102 aa15.83■□□□□ 0.12
CTNNA1-226ENST00000521368 FAM184BQ9ULE4 1060 aa15.83■□□□□ 0.12
CTNNA1-226ENST00000521368 FOSP01100 380 aaPredicted RBP15.82■□□□□ 0.12
CTNNA1-226ENST00000521368 NR3C2P08235 984 aa15.82■□□□□ 0.12
CTNNA1-226ENST00000521368 EIF2AK2P19525 551 aaKnown RBP15.82■□□□□ 0.12
CTNNA1-226ENST00000521368 GNA11P29992 359 aa15.82■□□□□ 0.12
CTNNA1-226ENST00000521368 CLK2P49760 499 aaKnown RBP15.82■□□□□ 0.12
CTNNA1-226ENST00000521368 AP3B2Q13367 1082 aa15.82■□□□□ 0.12
CTNNA1-226ENST00000521368 PGM5Q15124 567 aa15.82■□□□□ 0.12
CTNNA1-226ENST00000521368 STXBP2Q15833 593 aa15.82■□□□□ 0.12
CTNNA1-226ENST00000521368 LHX8Q68G74 356 aa15.82■□□□□ 0.12
CTNNA1-226ENST00000521368 FCHSD1Q86WN1 690 aa15.82■□□□□ 0.12
CTNNA1-226ENST00000521368 BICD2Q8TD16 824 aa15.82■□□□□ 0.12
CTNNA1-226ENST00000521368 ORC3Q9UBD5 711 aaPredicted RBP15.82■□□□□ 0.12
CTNNA1-226ENST00000521368 ZHX1Q9UKY1 873 aaPredicted RBP15.82■□□□□ 0.12
CTNNA1-226ENST00000521368 RBM47A0AV96 593 aaKnown RBP15.81■□□□□ 0.12
CTNNA1-226ENST00000521368 POTEFA5A3E0 1075 aa15.81■□□□□ 0.12
CTNNA1-226ENST00000521368 SPDYE3A6NKU9 549 aa15.81■□□□□ 0.12
CTNNA1-226ENST00000521368 STAM2O75886 525 aa15.81■□□□□ 0.12
CTNNA1-226ENST00000521368 CD2BP2O95400 341 aaKnown RBP15.81■□□□□ 0.12
CTNNA1-226ENST00000521368 XBP1P17861 261 aa15.81■□□□□ 0.12
CTNNA1-226ENST00000521368 UBE2SQ16763 222 aa15.81■□□□□ 0.12
CTNNA1-226ENST00000521368 CCDC144BQ3MJ40 725 aa15.81■□□□□ 0.12
CTNNA1-226ENST00000521368 GALNT17Q6IS24 598 aa15.81■□□□□ 0.12
CTNNA1-226ENST00000521368 TAPT1Q6NXT6 567 aa15.81■□□□□ 0.12
CTNNA1-226ENST00000521368 XRRA1Q6P2D8 792 aa15.81■□□□□ 0.12
CTNNA1-226ENST00000521368 VSIG10LQ86VR7 867 aa15.81■□□□□ 0.12
CTNNA1-226ENST00000521368 CCDC83Q8IWF9 413 aa15.81■□□□□ 0.12
CTNNA1-226ENST00000521368 EHMT1Q9H9B1 1298 aa15.81■□□□□ 0.12
CTNNA1-226ENST00000521368 VPS54Q9P1Q0 977 aa15.81■□□□□ 0.12
CTNNA1-226ENST00000521368 OGDHLQ9ULD0 1010 aa15.81■□□□□ 0.12
CTNNA1-226ENST00000521368 EIF3JO75822 258 aaKnown RBP15.8■□□□□ 0.12
CTNNA1-226ENST00000521368 RARBP10826 455 aa15.8■□□□□ 0.12
CTNNA1-226ENST00000521368 FDPSP14324 419 aaKnown RBP15.8■□□□□ 0.12
CTNNA1-226ENST00000521368 CCND2P30279 289 aa15.8■□□□□ 0.12
CTNNA1-226ENST00000521368 SOX10P56693 466 aa15.8■□□□□ 0.12
CTNNA1-226ENST00000521368 HMGN5P82970 282 aaKnown RBP15.8■□□□□ 0.12
CTNNA1-226ENST00000521368 IQSEC1Q6DN90 963 aa15.8■□□□□ 0.12
CTNNA1-226ENST00000521368 FBXO16Q8IX29 292 aaPredicted RBP15.8■□□□□ 0.12
CTNNA1-226ENST00000521368 ANKLE1Q8NAG6 615 aa15.8■□□□□ 0.12
CTNNA1-226ENST00000521368 SHISA4Q96DD7 197 aa15.8■□□□□ 0.12
CTNNA1-226ENST00000521368 TMX3Q96JJ7 454 aa15.8■□□□□ 0.12
CTNNA1-226ENST00000521368 PCDHA6Q9UN73 950 aa15.8■□□□□ 0.12
CTNNA1-226ENST00000521368 PCDHA8Q9Y5H6 950 aa15.8■□□□□ 0.12
CTNNA1-226ENST00000521368 DDX49Q9Y6V7 483 aaKnown RBP15.8■□□□□ 0.12
CTNNA1-226ENST00000521368 KIAA1217Q5T5P2 1943 aa15.8■□□□□ 0.12
CTNNA1-226ENST00000521368 DUSP11O75319 330 aaKnown RBP15.79■□□□□ 0.12
CTNNA1-226ENST00000521368 NLRP5P59047 1200 aa15.79■□□□□ 0.12
CTNNA1-226ENST00000521368 PCNX4Q63HM2 1172 aa15.79■□□□□ 0.12
CTNNA1-226ENST00000521368 EEPD1Q7L9B9 569 aa15.79■□□□□ 0.12
CTNNA1-226ENST00000521368 REXO1Q8N1G1 1221 aaKnown RBP15.79■□□□□ 0.12
CTNNA1-226ENST00000521368 DAGLBQ8NCG7 672 aa15.79■□□□□ 0.12
CTNNA1-226ENST00000521368 IL31RAQ8NI17 732 aa15.79■□□□□ 0.12
CTNNA1-226ENST00000521368 SCFD2Q8WU76 684 aa15.79■□□□□ 0.12
CTNNA1-226ENST00000521368 AIFM3Q96NN9 605 aa15.79■□□□□ 0.12
CTNNA1-226ENST00000521368 NKRFO15226 690 aaKnown RBP eCLIP15.78■□□□□ 0.12
CTNNA1-226ENST00000521368 JAK2O60674 1132 aa15.78■□□□□ 0.12
CTNNA1-226ENST00000521368 TFRCP02786 760 aaKnown RBP15.78■□□□□ 0.12
CTNNA1-226ENST00000521368 EN2P19622 333 aaPredicted RBP15.78■□□□□ 0.12
CTNNA1-226ENST00000521368 ADCYAP1R1P41586 468 aa15.78■□□□□ 0.12
CTNNA1-226ENST00000521368 TNFAIP2Q03169 654 aa15.78■□□□□ 0.12
CTNNA1-226ENST00000521368 DUSP28Q4G0W2 176 aa15.78■□□□□ 0.12
CTNNA1-226ENST00000521368 ALG1Q9BT22 464 aa15.78■□□□□ 0.12
CTNNA1-226ENST00000521368 PHF20Q9BVI0 1012 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms