RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ARHGEF16Q5VV41 709 aa23.87■■□□□ 1.41
TRIM35-203ENST00000521253 FBXL16Q8N461 479 aa23.87■■□□□ 1.41
TRIM35-203ENST00000521253 SAMD3Q8N6K7 520 aa23.87■■□□□ 1.41
TRIM35-203ENST00000521253 TSEN34Q9BSV6 310 aaKnown RBP23.87■■□□□ 1.41
TRIM35-203ENST00000521253 ZSWIM6Q9HCJ5 1215 aa23.87■■□□□ 1.41
TRIM35-203ENST00000521253 NAP1L2Q9ULW6 460 aaPredicted RBP23.87■■□□□ 1.41
TRIM35-203ENST00000521253 RBM47A0AV96 593 aaKnown RBP23.86■■□□□ 1.41
TRIM35-203ENST00000521253 CTAGE5O15320 804 aa23.86■■□□□ 1.41
TRIM35-203ENST00000521253 EIF2AK2P19525 551 aaKnown RBP23.86■■□□□ 1.41
TRIM35-203ENST00000521253 ACLYP53396 1101 aa23.86■■□□□ 1.41
TRIM35-203ENST00000521253 KCNA10Q16322 511 aa23.86■■□□□ 1.41
TRIM35-203ENST00000521253 SLC39A5Q6ZMH5 540 aa23.86■■□□□ 1.41
TRIM35-203ENST00000521253 RUFY3Q7L099 469 aa23.86■■□□□ 1.41
TRIM35-203ENST00000521253 TLK2Q86UE8 772 aa23.86■■□□□ 1.41
TRIM35-203ENST00000521253 IWS1Q96ST2 819 aa23.86■■□□□ 1.41
TRIM35-203ENST00000521253 AGXT2Q9BYV1 514 aa23.86■■□□□ 1.41
TRIM35-203ENST00000521253 WDR11Q9BZH6 1224 aa23.86■■□□□ 1.41
TRIM35-203ENST00000521253 PXMP2Q9NR77 195 aa23.86■■□□□ 1.41
TRIM35-203ENST00000521253 A0A1W2PQ45 241 aaPredicted RBP23.85■■□□□ 1.41
TRIM35-203ENST00000521253 A0A1W2PQY0 241 aa23.85■■□□□ 1.41
TRIM35-203ENST00000521253 DYNC1LI2O43237 492 aaPredicted RBP23.85■■□□□ 1.41
TRIM35-203ENST00000521253 NKX3-2P78367 333 aa23.85■■□□□ 1.41
TRIM35-203ENST00000521253 FUT2Q10981 343 aa23.85■■□□□ 1.41
TRIM35-203ENST00000521253 DUSP28Q4G0W2 176 aa23.85■■□□□ 1.41
TRIM35-203ENST00000521253 GNASQ5JWF2 1037 aa23.85■■□□□ 1.41
TRIM35-203ENST00000521253 FAM217BQ9NTX9 383 aaPredicted RBP23.85■■□□□ 1.41
TRIM35-203ENST00000521253 CNTNAP5Q8WYK1 1306 aa23.84■■□□□ 1.41
TRIM35-203ENST00000521253 MOXD2PA6NHM9 499 aa23.84■■□□□ 1.41
TRIM35-203ENST00000521253 CDC27P30260 824 aa23.84■■□□□ 1.41
TRIM35-203ENST00000521253 RTP1P59025 263 aa23.84■■□□□ 1.41
TRIM35-203ENST00000521253 BEX3Q00994 111 aa23.84■■□□□ 1.41
TRIM35-203ENST00000521253 FCHSD1Q86WN1 690 aa23.84■■□□□ 1.41
TRIM35-203ENST00000521253 PCSK9Q8NBP7 692 aaKnown RBP23.84■■□□□ 1.41
TRIM35-203ENST00000521253 TM6SF1Q9BZW5 370 aa23.84■■□□□ 1.41
TRIM35-203ENST00000521253 AP5M1Q9H0R1 490 aa23.84■■□□□ 1.41
TRIM35-203ENST00000521253 ZMYND8Q9ULU4 1186 aaPredicted RBP23.84■■□□□ 1.41
TRIM35-203ENST00000521253 Q9Y3F1 56 aa23.84■■□□□ 1.41
TRIM35-203ENST00000521253 CYP46A1Q9Y6A2 500 aa23.84■■□□□ 1.41
TRIM35-203ENST00000521253 RANBP2P49792 3224 aaKnown RBP23.84■■□□□ 1.41
TRIM35-203ENST00000521253 NR3C2P08235 984 aa23.83■■□□□ 1.41
TRIM35-203ENST00000521253 METAP2P50579 478 aaKnown RBP eCLIP23.83■■□□□ 1.41
TRIM35-203ENST00000521253 SNX17Q15036 470 aa23.83■■□□□ 1.41
TRIM35-203ENST00000521253 STXBP2Q15833 593 aa23.83■■□□□ 1.41
TRIM35-203ENST00000521253 SCFD2Q8WU76 684 aa23.83■■□□□ 1.41
TRIM35-203ENST00000521253 PDCD2LQ9BRP1 358 aa23.83■■□□□ 1.41
TRIM35-203ENST00000521253 UPF3BQ9BZI7 483 aaKnown RBP23.83■■□□□ 1.41
TRIM35-203ENST00000521253 ASGR1P07306 291 aa23.82■■□□□ 1.4
TRIM35-203ENST00000521253 ADD1P35611 737 aaKnown RBP23.82■■□□□ 1.4
TRIM35-203ENST00000521253 PPP2R5BQ15173 497 aa23.82■■□□□ 1.4
TRIM35-203ENST00000521253 FSCN1Q16658 493 aaKnown RBP23.82■■□□□ 1.4
TRIM35-203ENST00000521253 ATP11BQ9Y2G3 1177 aa23.82■■□□□ 1.4
TRIM35-203ENST00000521253 EIF3JO75822 258 aaKnown RBP23.81■■□□□ 1.4
TRIM35-203ENST00000521253 ARIH2O95376 493 aa23.81■■□□□ 1.4
TRIM35-203ENST00000521253 SYN1P17600 705 aa23.81■■□□□ 1.4
TRIM35-203ENST00000521253 TOB2Q14106 344 aaPredicted RBP23.81■■□□□ 1.4
TRIM35-203ENST00000521253 TRIM60Q495X7 471 aa23.81■■□□□ 1.4
TRIM35-203ENST00000521253 C1orf53Q5VUE5 145 aa23.81■■□□□ 1.4
TRIM35-203ENST00000521253 SEPT14Q6ZU15 432 aa23.81■■□□□ 1.4
TRIM35-203ENST00000521253 HEATR3Q7Z4Q2 680 aa23.81■■□□□ 1.4
TRIM35-203ENST00000521253 GPKOWQ92917 476 aaPredicted RBP eCLIP23.81■■□□□ 1.4
TRIM35-203ENST00000521253 STARD7Q9NQZ5 370 aa23.81■■□□□ 1.4
TRIM35-203ENST00000521253 NID2Q14112 1375 aa23.8■■□□□ 1.4
TRIM35-203ENST00000521253 CCDC196A0A1B0GTZ2 297 aa23.8■■□□□ 1.4
TRIM35-203ENST00000521253 MEIS2O14770 477 aa23.8■■□□□ 1.4
TRIM35-203ENST00000521253 TXNP10599 105 aaKnown RBP23.8■■□□□ 1.4
TRIM35-203ENST00000521253 EVCP57679 992 aa23.8■■□□□ 1.4
TRIM35-203ENST00000521253 TTLL4Q14679 1199 aa23.8■■□□□ 1.4
TRIM35-203ENST00000521253 PGM5Q15124 567 aa23.8■■□□□ 1.4
TRIM35-203ENST00000521253 USP17L6PQ6QN14 398 aa23.8■■□□□ 1.4
TRIM35-203ENST00000521253 IL31RAQ8NI17 732 aa23.8■■□□□ 1.4
TRIM35-203ENST00000521253 COPS5Q92905 334 aa23.8■■□□□ 1.4
TRIM35-203ENST00000521253 GLT1D1Q96MS3 346 aa23.8■■□□□ 1.4
TRIM35-203ENST00000521253 V9GY48 417 aaPredicted RBP23.8■■□□□ 1.4
TRIM35-203ENST00000521253 PIK3CDO00329 1044 aa23.79■■□□□ 1.4
TRIM35-203ENST00000521253 NKRFO15226 690 aaKnown RBP eCLIP23.79■■□□□ 1.4
TRIM35-203ENST00000521253 SEC24BO95487 1268 aa23.79■■□□□ 1.4
TRIM35-203ENST00000521253 MYCLP12524 364 aaPredicted RBP23.79■■□□□ 1.4
TRIM35-203ENST00000521253 WWC2Q6AWC2 1192 aa23.79■■□□□ 1.4
TRIM35-203ENST00000521253 CCDC62Q6P9F0 684 aa23.79■■□□□ 1.4
TRIM35-203ENST00000521253 CHRDL2Q6WN34 429 aa23.79■■□□□ 1.4
TRIM35-203ENST00000521253 VSIG10LQ86VR7 867 aa23.79■■□□□ 1.4
TRIM35-203ENST00000521253 OR6J1Q8NGC5 347 aa23.79■■□□□ 1.4
TRIM35-203ENST00000521253 SMARCC2Q8TAQ2 1214 aa23.79■■□□□ 1.4
TRIM35-203ENST00000521253 CUL5Q93034 780 aa23.79■■□□□ 1.4
TRIM35-203ENST00000521253 PSTPIP2Q9H939 334 aa23.79■■□□□ 1.4
TRIM35-203ENST00000521253 PCDH10Q9P2E7 1040 aa23.79■■□□□ 1.4
TRIM35-203ENST00000521253 EIF5BO60841 1220 aaKnown RBP23.78■■□□□ 1.4
TRIM35-203ENST00000521253 PDIA3P30101 505 aaKnown RBP23.78■■□□□ 1.4
TRIM35-203ENST00000521253 ANAPC15P60006 121 aa23.78■■□□□ 1.4
TRIM35-203ENST00000521253 COLQQ9Y215 455 aaPredicted RBP23.78■■□□□ 1.4
TRIM35-203ENST00000521253 ELP1O95163 1332 aa23.78■■□□□ 1.4
TRIM35-203ENST00000521253 FRMPD4Q14CM0 1322 aa23.78■■□□□ 1.4
TRIM35-203ENST00000521253 ZEB2O60315 1214 aa23.77■■□□□ 1.4
TRIM35-203ENST00000521253 RGS20O76081 388 aa23.77■■□□□ 1.4
TRIM35-203ENST00000521253 TLE2Q04725 743 aa23.77■■□□□ 1.4
TRIM35-203ENST00000521253 TYW1BQ6NUM6 668 aa23.77■■□□□ 1.4
TRIM35-203ENST00000521253 CXCL17Q6UXB2 119 aa23.77■■□□□ 1.4
TRIM35-203ENST00000521253 PDRG1Q9NUG6 133 aa23.77■■□□□ 1.4
TRIM35-203ENST00000521253 CCND2P30279 289 aa23.76■■□□□ 1.39
TRIM35-203ENST00000521253 LY6KQ17RY6 165 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms