RNA–Protein interactions for RNA: ENST00000520952.1

CDH17-204, Transcript of cadherin 17, humanhuman

TSL 4

Gene CDH17, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-204ENST00000520952 SCN5AQ14524 2016 aa10.72□□□□□ -0.69
CDH17-204ENST00000520952 NCOR1O75376 2440 aa10.72□□□□□ -0.69
CDH17-204ENST00000520952 IGHDP01880 384 aa10.71□□□□□ -0.69
CDH17-204ENST00000520952 TXNP10599 105 aaKnown RBP10.71□□□□□ -0.69
CDH17-204ENST00000520952 EDNRBP24530 442 aa10.71□□□□□ -0.69
CDH17-204ENST00000520952 FAM47CQ5HY64 1035 aa10.71□□□□□ -0.69
CDH17-204ENST00000520952 SYMPKQ92797 1274 aaKnown RBP10.71□□□□□ -0.69
CDH17-204ENST00000520952 TAAR1Q96RJ0 339 aa10.71□□□□□ -0.69
CDH17-204ENST00000520952 SEZ6LQ9BYH1 1024 aa10.71□□□□□ -0.69
CDH17-204ENST00000520952 MTIF3Q9H2K0 278 aaKnown RBP10.71□□□□□ -0.69
CDH17-204ENST00000520952 CERS4Q9HA82 394 aa10.71□□□□□ -0.69
CDH17-204ENST00000520952 VAT1LQ9HCJ6 419 aa10.71□□□□□ -0.69
CDH17-204ENST00000520952 GPHNQ9NQX3 736 aaPredicted RBP10.71□□□□□ -0.69
CDH17-204ENST00000520952 COL20A1Q9P218 1284 aa10.71□□□□□ -0.69
CDH17-204ENST00000520952 A6NJR5 290 aa10.7□□□□□ -0.7
CDH17-204ENST00000520952 ZNF213O14771 459 aa10.7□□□□□ -0.7
CDH17-204ENST00000520952 KDM4AO75164 1064 aa10.7□□□□□ -0.7
CDH17-204ENST00000520952 SUPT20HL2P0C7V6 817 aa10.7□□□□□ -0.7
CDH17-204ENST00000520952 ATP2A2P16615 1042 aaKnown RBP10.7□□□□□ -0.7
CDH17-204ENST00000520952 CPT1AP50416 773 aa10.7□□□□□ -0.7
CDH17-204ENST00000520952 PPP2R5BQ15173 497 aa10.7□□□□□ -0.7
CDH17-204ENST00000520952 LY6KQ17RY6 165 aa10.7□□□□□ -0.7
CDH17-204ENST00000520952 CWC27Q6UX04 472 aaKnown RBP10.7□□□□□ -0.7
CDH17-204ENST00000520952 SEPT14Q6ZU15 432 aa10.7□□□□□ -0.7
CDH17-204ENST00000520952 PLEKHM2Q8IWE5 1019 aa10.7□□□□□ -0.7
CDH17-204ENST00000520952 SCFD2Q8WU76 684 aa10.7□□□□□ -0.7
CDH17-204ENST00000520952 ESR2Q92731 530 aa10.7□□□□□ -0.7
CDH17-204ENST00000520952 TET1Q8NFU7 2136 aa10.7□□□□□ -0.7
CDH17-204ENST00000520952 PRRC2BQ5JSZ5 2229 aaKnown RBP10.69□□□□□ -0.7
CDH17-204ENST00000520952 ZMYM6O95789 1325 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 WDR19Q8NEZ3 1342 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 TRIP12Q14669 1992 aaPredicted RBP10.69□□□□□ -0.7
CDH17-204ENST00000520952 SCN10AQ9Y5Y9 1956 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 LOC102724159A0A0B4J2E5 919 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 EPOPA6NHQ4 379 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 B4E1Z4 1266 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 ARHGEF15O94989 841 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 IQCF3P0C7M6 154 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 PWP2Q15269 919 aaKnown RBP10.69□□□□□ -0.7
CDH17-204ENST00000520952 CDC37Q16543 378 aaPredicted RBP10.69□□□□□ -0.7
CDH17-204ENST00000520952 PPP2R2DQ66LE6 453 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 KRT40Q6A162 431 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 CCDC62Q6P9F0 684 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 CHST3Q7LGC8 479 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 DGKHQ86XP1 1220 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 SMC5Q8IY18 1101 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 ADGRF4Q8IZF3 695 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 MICALL1Q8N3F8 863 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 PNMA1Q8ND90 353 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 DNERQ8NFT8 737 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 SYTL5Q8TDW5 730 aaPredicted RBP10.69□□□□□ -0.7
CDH17-204ENST00000520952 AFG1LQ8WV93 481 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 ASB2Q96Q27 587 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 ZSWIM5Q9P217 1185 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 PCDHA11Q9Y5I1 949 aa10.69□□□□□ -0.7
CDH17-204ENST00000520952 TNFRSF10AO00220 468 aa10.68□□□□□ -0.7
CDH17-204ENST00000520952 NKRFO15226 690 aaKnown RBP eCLIP10.68□□□□□ -0.7
CDH17-204ENST00000520952 CA3P07451 260 aa10.68□□□□□ -0.7
CDH17-204ENST00000520952 PCP11498 1178 aaKnown RBP10.68□□□□□ -0.7
CDH17-204ENST00000520952 GPNMBQ14956 572 aa10.68□□□□□ -0.7
CDH17-204ENST00000520952 BRDTQ58F21 947 aaPredicted RBP10.68□□□□□ -0.7
CDH17-204ENST00000520952 GPATCH4Q5T3I0 446 aaKnown RBP10.68□□□□□ -0.7
CDH17-204ENST00000520952 GDF6Q6KF10 455 aaPredicted RBP10.68□□□□□ -0.7
CDH17-204ENST00000520952 NFRKBQ6P4R8 1299 aa10.68□□□□□ -0.7
CDH17-204ENST00000520952 SPRED2Q7Z698 418 aa10.68□□□□□ -0.7
CDH17-204ENST00000520952 TMCO2Q7Z6W1 182 aaPredicted RBP10.68□□□□□ -0.7
CDH17-204ENST00000520952 CHD1LQ86WJ1 897 aa10.68□□□□□ -0.7
CDH17-204ENST00000520952 RGS22Q8NE09 1264 aa10.68□□□□□ -0.7
CDH17-204ENST00000520952 ATXN2LQ8WWM7 1075 aaKnown RBP10.68□□□□□ -0.7
CDH17-204ENST00000520952 ANKS1AQ92625 1134 aa10.68□□□□□ -0.7
CDH17-204ENST00000520952 KAT2BQ92831 832 aa10.68□□□□□ -0.7
CDH17-204ENST00000520952 CTAGE1Q96RT6 745 aa10.68□□□□□ -0.7
CDH17-204ENST00000520952 FTOQ9C0B1 505 aaKnown RBP eCLIP10.68□□□□□ -0.7
CDH17-204ENST00000520952 RNF41Q9H4P4 317 aaPredicted RBP10.68□□□□□ -0.7
CDH17-204ENST00000520952 THEGQ9P2T0 379 aa10.68□□□□□ -0.7
CDH17-204ENST00000520952 TCF20Q9UGU0 1960 aaKnown RBP10.68□□□□□ -0.7
CDH17-204ENST00000520952 SORBS3O60504 671 aa10.67□□□□□ -0.7
CDH17-204ENST00000520952 KPNA6O60684 536 aa10.67□□□□□ -0.7
CDH17-204ENST00000520952 EIF2AK2P19525 551 aaKnown RBP10.67□□□□□ -0.7
CDH17-204ENST00000520952 MRPS5P82675 430 aaKnown RBP10.67□□□□□ -0.7
CDH17-204ENST00000520952 TFF2Q03403 129 aa10.67□□□□□ -0.7
CDH17-204ENST00000520952 ARHGAP1Q07960 439 aa10.67□□□□□ -0.7
CDH17-204ENST00000520952 PTGISQ16647 500 aa10.67□□□□□ -0.7
CDH17-204ENST00000520952 QRICH1Q2TAL8 776 aa10.67□□□□□ -0.7
CDH17-204ENST00000520952 TMEM67Q5HYA8 995 aa10.67□□□□□ -0.7
CDH17-204ENST00000520952 TICAM2Q86XR7 235 aa10.67□□□□□ -0.7
CDH17-204ENST00000520952 STAG2Q8N3U4 1231 aa10.67□□□□□ -0.7
CDH17-204ENST00000520952 ENAHQ8N8S7 591 aaPredicted RBP10.67□□□□□ -0.7
CDH17-204ENST00000520952 RETREG2Q8NC44 543 aa10.67□□□□□ -0.7
CDH17-204ENST00000520952 ADAMTS19Q8TE59 1207 aa10.67□□□□□ -0.7
CDH17-204ENST00000520952 NECAB3Q96P71 396 aaPredicted RBP10.67□□□□□ -0.7
CDH17-204ENST00000520952 ZSCAN10Q96SZ4 725 aaPredicted RBP10.67□□□□□ -0.7
CDH17-204ENST00000520952 RMDN3Q96TC7 470 aa10.67□□□□□ -0.7
CDH17-204ENST00000520952 MPHOSPH6Q99547 160 aaKnown RBP10.67□□□□□ -0.7
CDH17-204ENST00000520952 IL25Q9H293 177 aa10.67□□□□□ -0.7
CDH17-204ENST00000520952 RWDD1Q9H446 243 aaPredicted RBP10.67□□□□□ -0.7
CDH17-204ENST00000520952 KAT14Q9H8E8 782 aa10.67□□□□□ -0.7
CDH17-204ENST00000520952 JMJD4Q9H9V9 463 aa10.67□□□□□ -0.7
CDH17-204ENST00000520952 RAPGEFL1Q9UHV5 662 aa10.67□□□□□ -0.7
CDH17-204ENST00000520952 PNMA2Q9UL42 364 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms