RNA–Protein interactions for RNA: ENST00000520926.1

MTCL1-210, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 4

Gene MTCL1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-210ENST00000520926 SNX17Q15036 470 aa13.29□□□□□ -0.28
MTCL1-210ENST00000520926 HABP4Q5JVS0 413 aaKnown RBP13.29□□□□□ -0.28
MTCL1-210ENST00000520926 IQSEC1Q6DN90 963 aa13.29□□□□□ -0.28
MTCL1-210ENST00000520926 TAPT1Q6NXT6 567 aa13.29□□□□□ -0.28
MTCL1-210ENST00000520926 MICU3Q86XE3 530 aa13.29□□□□□ -0.28
MTCL1-210ENST00000520926 HOMER1Q86YM7 354 aa13.29□□□□□ -0.28
MTCL1-210ENST00000520926 TBC1D5Q92609 795 aa13.29□□□□□ -0.28
MTCL1-210ENST00000520926 SNX21Q969T3 373 aa13.29□□□□□ -0.28
MTCL1-210ENST00000520926 UPF3AQ9H1J1 476 aaKnown RBP13.29□□□□□ -0.28
MTCL1-210ENST00000520926 NID2Q14112 1375 aa13.29□□□□□ -0.28
MTCL1-210ENST00000520926 A0A1W2PQ45 241 aaPredicted RBP13.28□□□□□ -0.28
MTCL1-210ENST00000520926 A0A1W2PQY0 241 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 MYADML2A6NDP7 307 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 GOLGA8BA8MQT2 603 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 CYTH3O43739 400 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 PPP1R11O60927 126 aaPredicted RBP13.28□□□□□ -0.28
MTCL1-210ENST00000520926 CALM1P0DP23 149 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 CALM2P0DP24 149 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 CALM3P0DP25 149 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 ACLYP53396 1101 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 NKX3-2P78367 333 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 CCT2P78371 535 aaKnown RBP13.28□□□□□ -0.28
MTCL1-210ENST00000520926 PDE4DQ08499 809 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 FUT2Q10981 343 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 SCRN1Q12765 414 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 NTRK3Q16288 839 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 KCNA10Q16322 511 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 C1orf53Q5VUE5 145 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 CCSAPQ6IQ19 270 aaPredicted RBP13.28□□□□□ -0.28
MTCL1-210ENST00000520926 SYNE3Q6ZMZ3 975 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 CMTR1Q8N1G2 835 aaKnown RBP13.28□□□□□ -0.28
MTCL1-210ENST00000520926 NECAB1Q8N987 351 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 PCSK9Q8NBP7 692 aaKnown RBP13.28□□□□□ -0.28
MTCL1-210ENST00000520926 SYTL5Q8TDW5 730 aaPredicted RBP13.28□□□□□ -0.28
MTCL1-210ENST00000520926 PIGSQ96S52 555 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 PRO3102Q9H379 93 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 NCOA5Q9HCD5 579 aaKnown RBP13.28□□□□□ -0.28
MTCL1-210ENST00000520926 PDGFCQ9NRA1 345 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 NAP1L2Q9ULW6 460 aaPredicted RBP13.28□□□□□ -0.28
MTCL1-210ENST00000520926 GNEQ9Y223 722 aaKnown RBP13.28□□□□□ -0.28
MTCL1-210ENST00000520926 ATP11BQ9Y2G3 1177 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 PCDHA1Q9Y5I3 950 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 TRIOBPQ9H2D6 2365 aa13.28□□□□□ -0.28
MTCL1-210ENST00000520926 PNMA6FA0A0J9YX94 578 aa13.27□□□□□ -0.29
MTCL1-210ENST00000520926 GOLGA8AA7E2F4 631 aa13.27□□□□□ -0.29
MTCL1-210ENST00000520926 DTNBO60941 627 aa13.27□□□□□ -0.29
MTCL1-210ENST00000520926 PLEKHA8P1O95397 391 aa13.27□□□□□ -0.29
MTCL1-210ENST00000520926 CFBP00751 764 aa13.27□□□□□ -0.29
MTCL1-210ENST00000520926 SMPD1P17405 629 aa13.27□□□□□ -0.29
MTCL1-210ENST00000520926 EDNRBP24530 442 aa13.27□□□□□ -0.29
MTCL1-210ENST00000520926 SMARCA1P28370 1054 aa13.27□□□□□ -0.29
MTCL1-210ENST00000520926 GNAQP50148 359 aa13.27□□□□□ -0.29
MTCL1-210ENST00000520926 METAP2P50579 478 aaKnown RBP eCLIP13.27□□□□□ -0.29
MTCL1-210ENST00000520926 GHRHRQ02643 423 aa13.27□□□□□ -0.29
MTCL1-210ENST00000520926 TRIM60Q495X7 471 aa13.27□□□□□ -0.29
MTCL1-210ENST00000520926 GNASQ5JWF2 1037 aa13.27□□□□□ -0.29
MTCL1-210ENST00000520926 TLK2Q86UE8 772 aa13.27□□□□□ -0.29
MTCL1-210ENST00000520926 SRBD1Q8N5C6 995 aaKnown RBP13.27□□□□□ -0.29
MTCL1-210ENST00000520926 SAMD3Q8N6K7 520 aa13.27□□□□□ -0.29
MTCL1-210ENST00000520926 NSUN6Q8TEA1 469 aaKnown RBP13.27□□□□□ -0.29
MTCL1-210ENST00000520926 TMX3Q96JJ7 454 aa13.27□□□□□ -0.29
MTCL1-210ENST00000520926 ZSCAN31Q96LW9 406 aaPredicted RBP13.27□□□□□ -0.29
MTCL1-210ENST00000520926 TAAR1Q96RJ0 339 aa13.27□□□□□ -0.29
MTCL1-210ENST00000520926 LZTS2Q9BRK4 669 aa13.27□□□□□ -0.29
MTCL1-210ENST00000520926 AP5M1Q9H0R1 490 aa13.27□□□□□ -0.29
MTCL1-210ENST00000520926 STARD7Q9NQZ5 370 aa13.27□□□□□ -0.29
MTCL1-210ENST00000520926 MAP3K20Q9NYL2 800 aaKnown RBP13.27□□□□□ -0.29
MTCL1-210ENST00000520926 RBM27Q9P2N5 1060 aaKnown RBP13.27□□□□□ -0.29
MTCL1-210ENST00000520926 Q9Y3F1 56 aa13.27□□□□□ -0.29
MTCL1-210ENST00000520926 RBM47A0AV96 593 aaKnown RBP13.26□□□□□ -0.29
MTCL1-210ENST00000520926 OPLAHO14841 1288 aa13.26□□□□□ -0.29
MTCL1-210ENST00000520926 CTAGE5O15320 804 aa13.26□□□□□ -0.29
MTCL1-210ENST00000520926 CTDNEP1O95476 244 aa13.26□□□□□ -0.29
MTCL1-210ENST00000520926 ASGR1P07306 291 aa13.26□□□□□ -0.29
MTCL1-210ENST00000520926 MCM2P49736 904 aa13.26□□□□□ -0.29
MTCL1-210ENST00000520926 HSD17B4P51659 736 aa13.26□□□□□ -0.29
MTCL1-210ENST00000520926 IRX5P78411 483 aaPredicted RBP13.26□□□□□ -0.29
MTCL1-210ENST00000520926 PPP2R5BQ15173 497 aa13.26□□□□□ -0.29
MTCL1-210ENST00000520926 RTN1Q16799 776 aa13.26□□□□□ -0.29
MTCL1-210ENST00000520926 DUSP28Q4G0W2 176 aa13.26□□□□□ -0.29
MTCL1-210ENST00000520926 TMTC3Q6ZXV5 915 aa13.26□□□□□ -0.29
MTCL1-210ENST00000520926 GTF3C6Q969F1 213 aa13.26□□□□□ -0.29
MTCL1-210ENST00000520926 GLT1D1Q96MS3 346 aa13.26□□□□□ -0.29
MTCL1-210ENST00000520926 IWS1Q96ST2 819 aa13.26□□□□□ -0.29
MTCL1-210ENST00000520926 RMDN3Q96TC7 470 aa13.26□□□□□ -0.29
MTCL1-210ENST00000520926 GDF15Q99988 308 aa13.26□□□□□ -0.29
MTCL1-210ENST00000520926 SPZ1Q9BXG8 430 aa13.26□□□□□ -0.29
MTCL1-210ENST00000520926 WDR11Q9BZH6 1224 aa13.26□□□□□ -0.29
MTCL1-210ENST00000520926 SLKQ9H2G2 1235 aaPredicted RBP13.26□□□□□ -0.29
MTCL1-210ENST00000520926 COL20A1Q9P218 1284 aa13.26□□□□□ -0.29
MTCL1-210ENST00000520926 PRKAG2Q9UGJ0 569 aa13.26□□□□□ -0.29
MTCL1-210ENST00000520926 ELP1O95163 1332 aa13.25□□□□□ -0.29
MTCL1-210ENST00000520926 DYNC1LI2O43237 492 aaPredicted RBP13.25□□□□□ -0.29
MTCL1-210ENST00000520926 BMP8BP34820 402 aa13.25□□□□□ -0.29
MTCL1-210ENST00000520926 BEX3Q00994 111 aa13.25□□□□□ -0.29
MTCL1-210ENST00000520926 TMEM63BQ5T3F8 832 aa13.25□□□□□ -0.29
MTCL1-210ENST00000520926 ARHGEF16Q5VV41 709 aa13.25□□□□□ -0.29
MTCL1-210ENST00000520926 CCDC82Q8N4S0 544 aa13.25□□□□□ -0.29
MTCL1-210ENST00000520926 SCFD2Q8WU76 684 aa13.25□□□□□ -0.29
MTCL1-210ENST00000520926 PIBF1Q8WXW3 757 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms