RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 WNT8AQ9H1J5 351 aa17.73■□□□□ 0.43
CSMD1-207ENST00000520451 CNNM2Q9H8M5 875 aa17.73■□□□□ 0.43
CSMD1-207ENST00000520451 TRMT13Q9NUP7 481 aaKnown RBP17.73■□□□□ 0.43
CSMD1-207ENST00000520451 CXXC1Q9P0U4 656 aaPredicted RBP17.73■□□□□ 0.43
CSMD1-207ENST00000520451 SUPT20HL2P0C7V6 817 aa17.72■□□□□ 0.43
CSMD1-207ENST00000520451 TXNP10599 105 aaKnown RBP17.72■□□□□ 0.43
CSMD1-207ENST00000520451 TTLL4Q14679 1199 aa17.72■□□□□ 0.43
CSMD1-207ENST00000520451 QRICH1Q2TAL8 776 aa17.72■□□□□ 0.43
CSMD1-207ENST00000520451 OTOP2Q7RTS6 562 aa17.72■□□□□ 0.43
CSMD1-207ENST00000520451 COL25A1Q9BXS0 654 aaPredicted RBP17.72■□□□□ 0.43
CSMD1-207ENST00000520451 IL25Q9H293 177 aa17.72■□□□□ 0.43
CSMD1-207ENST00000520451 VCANP13611 3396 aa17.72■□□□□ 0.43
CSMD1-207ENST00000520451 ARIH2O95376 493 aa17.71■□□□□ 0.43
CSMD1-207ENST00000520451 CYP2C9P11712 490 aa17.71■□□□□ 0.43
CSMD1-207ENST00000520451 NBPF20Q3BBV1 942 aa17.71■□□□□ 0.43
CSMD1-207ENST00000520451 FAM47CQ5HY64 1035 aa17.71■□□□□ 0.43
CSMD1-207ENST00000520451 IFIT1BQ5T764 474 aaKnown RBP17.71■□□□□ 0.43
CSMD1-207ENST00000520451 FBXO11Q86XK2 927 aa17.71■□□□□ 0.43
CSMD1-207ENST00000520451 SYTL5Q8TDW5 730 aaPredicted RBP17.71■□□□□ 0.43
CSMD1-207ENST00000520451 TBC1D5Q92609 795 aa17.71■□□□□ 0.43
CSMD1-207ENST00000520451 SCLYQ96I15 445 aa17.71■□□□□ 0.43
CSMD1-207ENST00000520451 MAF1Q9H063 256 aa17.71■□□□□ 0.43
CSMD1-207ENST00000520451 VAT1LQ9HCJ6 419 aa17.71■□□□□ 0.43
CSMD1-207ENST00000520451 A6NJR5 290 aa17.7■□□□□ 0.42
CSMD1-207ENST00000520451 KPNA6O60684 536 aa17.7■□□□□ 0.42
CSMD1-207ENST00000520451 GSPT1P15170 499 aaKnown RBP17.7■□□□□ 0.42
CSMD1-207ENST00000520451 PDE4AP27815 886 aa17.7■□□□□ 0.42
CSMD1-207ENST00000520451 RAB30Q15771 203 aa17.7■□□□□ 0.42
CSMD1-207ENST00000520451 TTC22Q5TAA0 569 aa17.7■□□□□ 0.42
CSMD1-207ENST00000520451 MCF2L2Q86YR7 1114 aa17.7■□□□□ 0.42
CSMD1-207ENST00000520451 RPUSD2Q8IZ73 545 aaKnown RBP17.7■□□□□ 0.42
CSMD1-207ENST00000520451 NSUN6Q8TEA1 469 aaKnown RBP17.7■□□□□ 0.42
CSMD1-207ENST00000520451 PPP1R13LQ8WUF5 828 aa17.7■□□□□ 0.42
CSMD1-207ENST00000520451 TAAR1Q96RJ0 339 aa17.7■□□□□ 0.42
CSMD1-207ENST00000520451 JMJD4Q9H9V9 463 aa17.7■□□□□ 0.42
CSMD1-207ENST00000520451 COL20A1Q9P218 1284 aa17.7■□□□□ 0.42
CSMD1-207ENST00000520451 MSRAQ9UJ68 235 aa17.7■□□□□ 0.42
CSMD1-207ENST00000520451 MRPL11Q9Y3B7 192 aaKnown RBP17.7■□□□□ 0.42
CSMD1-207ENST00000520451 CHD9Q3L8U1 2897 aa17.69■□□□□ 0.42
CSMD1-207ENST00000520451 SEPT14Q6ZU15 432 aa17.69■□□□□ 0.42
CSMD1-207ENST00000520451 RMDN3Q96TC7 470 aa17.69■□□□□ 0.42
CSMD1-207ENST00000520451 SUPT16HQ9Y5B9 1047 aaKnown RBP17.69■□□□□ 0.42
CSMD1-207ENST00000520451 ZBBXA8MT70 800 aa17.68■□□□□ 0.42
CSMD1-207ENST00000520451 CHMP4BP1P59074 171 aa17.68■□□□□ 0.42
CSMD1-207ENST00000520451 STXBP2Q15833 593 aa17.68■□□□□ 0.42
CSMD1-207ENST00000520451 ARHGEF16Q5VV41 709 aa17.68■□□□□ 0.42
CSMD1-207ENST00000520451 NFRKBQ6P4R8 1299 aa17.68■□□□□ 0.42
CSMD1-207ENST00000520451 CCDC62Q6P9F0 684 aa17.68■□□□□ 0.42
CSMD1-207ENST00000520451 STAG2Q8N3U4 1231 aa17.68■□□□□ 0.42
CSMD1-207ENST00000520451 IWS1Q96ST2 819 aa17.68■□□□□ 0.42
CSMD1-207ENST00000520451 GAS2L1Q99501 681 aaPredicted RBP17.68■□□□□ 0.42
CSMD1-207ENST00000520451 NKX2-4Q9H2Z4 354 aa17.68■□□□□ 0.42
CSMD1-207ENST00000520451 PRDM12Q9H4Q4 367 aa17.68■□□□□ 0.42
CSMD1-207ENST00000520451 SLC4A7Q9Y6M7 1214 aa17.68■□□□□ 0.42
CSMD1-207ENST00000520451 SCN10AQ9Y5Y9 1956 aa17.68■□□□□ 0.42
CSMD1-207ENST00000520451 GH1P01241 217 aa17.67■□□□□ 0.42
CSMD1-207ENST00000520451 EIF2AK2P19525 551 aaKnown RBP17.67■□□□□ 0.42
CSMD1-207ENST00000520451 TRDNQ13061 729 aa17.67■□□□□ 0.42
CSMD1-207ENST00000520451 SEC23AQ15436 765 aa17.67■□□□□ 0.42
CSMD1-207ENST00000520451 LY6KQ17RY6 165 aa17.67■□□□□ 0.42
CSMD1-207ENST00000520451 CYB5R4Q7L1T6 521 aa17.67■□□□□ 0.42
CSMD1-207ENST00000520451 DEFB128Q7Z7B8 93 aa17.67■□□□□ 0.42
CSMD1-207ENST00000520451 AFG1LQ8WV93 481 aa17.67■□□□□ 0.42
CSMD1-207ENST00000520451 VWCEQ96DN2 955 aa17.67■□□□□ 0.42
CSMD1-207ENST00000520451 AMNQ9BXJ7 453 aa17.67■□□□□ 0.42
CSMD1-207ENST00000520451 KLRF2D3W0D1 207 aa17.66■□□□□ 0.42
CSMD1-207ENST00000520451 CFBP00751 764 aa17.66■□□□□ 0.42
CSMD1-207ENST00000520451 PFKMP08237 780 aa17.66■□□□□ 0.42
CSMD1-207ENST00000520451 PTPN11Q06124 597 aaPredicted RBP17.66■□□□□ 0.42
CSMD1-207ENST00000520451 ARHGAP1Q07960 439 aa17.66■□□□□ 0.42
CSMD1-207ENST00000520451 CHST3Q7LGC8 479 aa17.66■□□□□ 0.42
CSMD1-207ENST00000520451 USP38Q8NB14 1042 aa17.66■□□□□ 0.42
CSMD1-207ENST00000520451 RUFY2Q8WXA3 655 aa17.66■□□□□ 0.42
CSMD1-207ENST00000520451 MAD2L2Q9UI95 211 aa17.66■□□□□ 0.42
CSMD1-207ENST00000520451 NOD1Q9Y239 953 aa17.66■□□□□ 0.42
CSMD1-207ENST00000520451 YBX2Q9Y2T7 364 aaKnown RBP17.66■□□□□ 0.42
CSMD1-207ENST00000520451 MMP3P08254 477 aa17.65■□□□□ 0.42
CSMD1-207ENST00000520451 RABGGTBP53611 331 aa17.65■□□□□ 0.42
CSMD1-207ENST00000520451 PTH1RQ03431 593 aa17.65■□□□□ 0.42
CSMD1-207ENST00000520451 RETREG2Q8NC44 543 aa17.65■□□□□ 0.42
CSMD1-207ENST00000520451 SLC28A3Q9HAS3 691 aa17.65■□□□□ 0.42
CSMD1-207ENST00000520451 PXMP2Q9NR77 195 aa17.65■□□□□ 0.42
CSMD1-207ENST00000520451 U3KPZ7 1027 aaPredicted RBP17.65■□□□□ 0.42
CSMD1-207ENST00000520451 CHD7Q9P2D1 2997 aa17.64■□□□□ 0.42
CSMD1-207ENST00000520451 PITPNM1O00562 1244 aa17.64■□□□□ 0.41
CSMD1-207ENST00000520451 OPLAHO14841 1288 aa17.64■□□□□ 0.41
CSMD1-207ENST00000520451 IFIT3O14879 490 aaKnown RBP17.64■□□□□ 0.41
CSMD1-207ENST00000520451 ZBTB5O15062 677 aa17.64■□□□□ 0.41
CSMD1-207ENST00000520451 PPP1R11O60927 126 aaPredicted RBP17.64■□□□□ 0.41
CSMD1-207ENST00000520451 EIF3JO75822 258 aaKnown RBP17.64■□□□□ 0.41
CSMD1-207ENST00000520451 NR3C2P08235 984 aa17.64■□□□□ 0.41
CSMD1-207ENST00000520451 CYP21A2P08686 494 aa17.64■□□□□ 0.41
CSMD1-207ENST00000520451 ATP2A2P16615 1042 aaKnown RBP17.64■□□□□ 0.41
CSMD1-207ENST00000520451 CHMLP26374 656 aa17.64■□□□□ 0.41
CSMD1-207ENST00000520451 RFC2P35250 354 aa17.64■□□□□ 0.41
CSMD1-207ENST00000520451 HSD17B4P51659 736 aa17.64■□□□□ 0.41
CSMD1-207ENST00000520451 MTMR8Q96EF0 704 aa17.64■□□□□ 0.41
CSMD1-207ENST00000520451 PCDHA1Q9Y5I3 950 aa17.64■□□□□ 0.41
CSMD1-207ENST00000520451 MRVI1Q9Y6F6 885 aa17.64■□□□□ 0.41
CSMD1-207ENST00000520451 SPTBN5Q9NRC6 3674 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms