RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 SYTL5Q8TDW5 730 aaPredicted RBP16.15■□□□□ 0.18
SDC2-203ENST00000519587 NUDT12Q9BQG2 462 aa16.15■□□□□ 0.18
SDC2-203ENST00000519587 ANO3Q9BYT9 981 aa16.15■□□□□ 0.18
SDC2-203ENST00000519587 ZSCAN16Q9H4T2 348 aaPredicted RBP16.15■□□□□ 0.18
SDC2-203ENST00000519587 NOL7Q9UMY1 257 aaKnown RBP16.15■□□□□ 0.18
SDC2-203ENST00000519587 PCDHA6Q9UN73 950 aa16.15■□□□□ 0.18
SDC2-203ENST00000519587 PCDHA8Q9Y5H6 950 aa16.15■□□□□ 0.18
SDC2-203ENST00000519587 MYH7BA7E2Y1 1941 aa16.15■□□□□ 0.18
SDC2-203ENST00000519587 DOCK3Q8IZD9 2030 aa16.14■□□□□ 0.17
SDC2-203ENST00000519587 DNAJC25-GNG10A0A024R161 153 aa16.14■□□□□ 0.17
SDC2-203ENST00000519587 U2AF2P26368 475 aaKnown RBP eCLIP16.14■□□□□ 0.17
SDC2-203ENST00000519587 DDIT3P35638 169 aa16.14■□□□□ 0.17
SDC2-203ENST00000519587 RGS2P41220 211 aa16.14■□□□□ 0.17
SDC2-203ENST00000519587 NR5A1Q13285 461 aa16.14■□□□□ 0.17
SDC2-203ENST00000519587 CTU1Q7Z7A3 348 aaKnown RBP16.14■□□□□ 0.17
SDC2-203ENST00000519587 FAM133AQ8N9E0 248 aa16.14■□□□□ 0.17
SDC2-203ENST00000519587 RASGRP4Q8TDF6 673 aa16.14■□□□□ 0.17
SDC2-203ENST00000519587 NSUN6Q8TEA1 469 aaKnown RBP16.14■□□□□ 0.17
SDC2-203ENST00000519587 RMDN3Q96TC7 470 aa16.14■□□□□ 0.17
SDC2-203ENST00000519587 TMEM260Q9NX78 707 aa16.14■□□□□ 0.17
SDC2-203ENST00000519587 CHMP5Q9NZZ3 219 aa16.14■□□□□ 0.17
SDC2-203ENST00000519587 ATP6V1DQ9Y5K8 247 aa16.14■□□□□ 0.17
SDC2-203ENST00000519587 M0R2N6 131 aa16.13■□□□□ 0.17
SDC2-203ENST00000519587 PGK2P07205 417 aa16.13■□□□□ 0.17
SDC2-203ENST00000519587 MAP2K5Q13163 448 aa16.13■□□□□ 0.17
SDC2-203ENST00000519587 MORN1Q5T089 497 aa16.13■□□□□ 0.17
SDC2-203ENST00000519587 ARHGEF16Q5VV41 709 aa16.13■□□□□ 0.17
SDC2-203ENST00000519587 PIK3AP1Q6ZUJ8 805 aa16.13■□□□□ 0.17
SDC2-203ENST00000519587 FERMT3Q86UX7 667 aa16.13■□□□□ 0.17
SDC2-203ENST00000519587 CD99L2Q8TCZ2 262 aa16.13■□□□□ 0.17
SDC2-203ENST00000519587 ZNF296Q8WUU4 475 aaPredicted RBP16.13■□□□□ 0.17
SDC2-203ENST00000519587 TBC1D5Q92609 795 aa16.13■□□□□ 0.17
SDC2-203ENST00000519587 TNFRSF25Q93038 417 aa16.13■□□□□ 0.17
SDC2-203ENST00000519587 TRIM47Q96LD4 638 aa16.13■□□□□ 0.17
SDC2-203ENST00000519587 NAP1L4Q99733 375 aaKnown RBP16.13■□□□□ 0.17
SDC2-203ENST00000519587 APBA2Q99767 749 aa16.13■□□□□ 0.17
SDC2-203ENST00000519587 DIS3Q9Y2L1 958 aaKnown RBP16.13■□□□□ 0.17
SDC2-203ENST00000519587 LRRC37A2A6NM11 1700 aa16.13■□□□□ 0.17
SDC2-203ENST00000519587 FRMPD4Q14CM0 1322 aa16.13■□□□□ 0.17
SDC2-203ENST00000519587 RPTORQ8N122 1335 aa16.13■□□□□ 0.17
SDC2-203ENST00000519587 ASB14A6NK59 587 aa16.12■□□□□ 0.17
SDC2-203ENST00000519587 ECM2O94769 699 aaPredicted RBP16.12■□□□□ 0.17
SDC2-203ENST00000519587 BRD1O95696 1058 aa16.12■□□□□ 0.17
SDC2-203ENST00000519587 F13A1P00488 732 aa16.12■□□□□ 0.17
SDC2-203ENST00000519587 CCND2P30279 289 aa16.12■□□□□ 0.17
SDC2-203ENST00000519587 SREBF1P36956 1147 aa16.12■□□□□ 0.17
SDC2-203ENST00000519587 TRAPPC10P48553 1259 aa16.12■□□□□ 0.17
SDC2-203ENST00000519587 XRRA1Q6P2D8 792 aa16.12■□□□□ 0.17
SDC2-203ENST00000519587 ZNF467Q7Z7K2 595 aaPredicted RBP16.12■□□□□ 0.17
SDC2-203ENST00000519587 IWS1Q96ST2 819 aa16.12■□□□□ 0.17
SDC2-203ENST00000519587 PXMP2Q9NR77 195 aa16.12■□□□□ 0.17
SDC2-203ENST00000519587 COL20A1Q9P218 1284 aa16.12■□□□□ 0.17
SDC2-203ENST00000519587 KIF28PB7ZC32 967 aa16.11■□□□□ 0.17
SDC2-203ENST00000519587 HOXC6P09630 235 aa16.11■□□□□ 0.17
SDC2-203ENST00000519587 EIF2AK2P19525 551 aaKnown RBP16.11■□□□□ 0.17
SDC2-203ENST00000519587 ALDH5A1P51649 535 aaPredicted RBP16.11■□□□□ 0.17
SDC2-203ENST00000519587 PRMT2P55345 433 aa16.11■□□□□ 0.17
SDC2-203ENST00000519587 ARHGAP4P98171 946 aa16.11■□□□□ 0.17
SDC2-203ENST00000519587 CNTN2Q02246 1040 aa16.11■□□□□ 0.17
SDC2-203ENST00000519587 RESTQ13127 1097 aa16.11■□□□□ 0.17
SDC2-203ENST00000519587 RILPL1Q5EBL4 403 aa16.11■□□□□ 0.17
SDC2-203ENST00000519587 NEK8Q86SG6 692 aa16.11■□□□□ 0.17
SDC2-203ENST00000519587 TRMT44Q8IYL2 757 aaKnown RBP16.11■□□□□ 0.17
SDC2-203ENST00000519587 MSL3Q8N5Y2 521 aaKnown RBP16.11■□□□□ 0.17
SDC2-203ENST00000519587 TBCKQ8TEA7 893 aa16.11■□□□□ 0.17
SDC2-203ENST00000519587 TAAR1Q96RJ0 339 aa16.11■□□□□ 0.17
SDC2-203ENST00000519587 ARHGAP39Q9C0H5 1083 aa16.11■□□□□ 0.17
SDC2-203ENST00000519587 MCM3APO60318 1980 aa16.1■□□□□ 0.17
SDC2-203ENST00000519587 STAM2O75886 525 aa16.1■□□□□ 0.17
SDC2-203ENST00000519587 GCFC2P16383 781 aaKnown RBP16.1■□□□□ 0.17
SDC2-203ENST00000519587 PDE4DQ08499 809 aa16.1■□□□□ 0.17
SDC2-203ENST00000519587 PKP1Q13835 747 aa16.1■□□□□ 0.17
SDC2-203ENST00000519587 INF2Q27J81 1249 aa16.1■□□□□ 0.17
SDC2-203ENST00000519587 ZNF792Q3KQV3 632 aa16.1■□□□□ 0.17
SDC2-203ENST00000519587 FOXD4L5Q5VV16 416 aaPredicted RBP16.1■□□□□ 0.17
SDC2-203ENST00000519587 PCNX4Q63HM2 1172 aa16.1■□□□□ 0.17
SDC2-203ENST00000519587 FOXD4L4Q8WXT5 416 aaPredicted RBP16.1■□□□□ 0.17
SDC2-203ENST00000519587 PGBD1Q96JS3 809 aa16.1■□□□□ 0.17
SDC2-203ENST00000519587 PDCD2LQ9BRP1 358 aa16.1■□□□□ 0.17
SDC2-203ENST00000519587 SOWAHBA6NEL2 793 aa16.09■□□□□ 0.17
SDC2-203ENST00000519587 ADAMTS3O15072 1205 aa16.09■□□□□ 0.17
SDC2-203ENST00000519587 COBLO75128 1261 aa16.09■□□□□ 0.17
SDC2-203ENST00000519587 XRCC5P13010 732 aaKnown RBP16.09■□□□□ 0.17
SDC2-203ENST00000519587 ZNF76P36508 570 aa16.09■□□□□ 0.17
SDC2-203ENST00000519587 USP11P51784 963 aa16.09■□□□□ 0.17
SDC2-203ENST00000519587 ORC2Q13416 577 aaPredicted RBP16.09■□□□□ 0.17
SDC2-203ENST00000519587 PGM5Q15124 567 aa16.09■□□□□ 0.17
SDC2-203ENST00000519587 STXBP2Q15833 593 aa16.09■□□□□ 0.17
SDC2-203ENST00000519587 MOXD1Q6UVY6 613 aa16.09■□□□□ 0.17
SDC2-203ENST00000519587 USP6NLQ92738 828 aa16.09■□□□□ 0.17
SDC2-203ENST00000519587 SRRDQ9UH36 339 aa16.09■□□□□ 0.17
SDC2-203ENST00000519587 KIAA1217Q5T5P2 1943 aa16.08■□□□□ 0.16
SDC2-203ENST00000519587 NR3C2P08235 984 aa16.08■□□□□ 0.16
SDC2-203ENST00000519587 CYP3A4P08684 503 aa16.08■□□□□ 0.16
SDC2-203ENST00000519587 MYCLP12524 364 aaPredicted RBP16.08■□□□□ 0.16
SDC2-203ENST00000519587 CYP2B6P20813 491 aa16.08■□□□□ 0.16
SDC2-203ENST00000519587 CTGFP29279 349 aa16.08■□□□□ 0.16
SDC2-203ENST00000519587 FLT3LGP49771 235 aa16.08■□□□□ 0.16
SDC2-203ENST00000519587 PRKCZQ05513 592 aa16.08■□□□□ 0.16
SDC2-203ENST00000519587 IRF5Q13568 498 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms