RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 HERVK_113Q902F9 699 aa12.7□□□□□ -0.38
PVT1-208ENST00000519481 ANKS1AQ92625 1134 aa12.7□□□□□ -0.38
PVT1-208ENST00000519481 GAS2L1Q99501 681 aaPredicted RBP12.7□□□□□ -0.38
PVT1-208ENST00000519481 NOC4LQ9BVI4 516 aaKnown RBP12.7□□□□□ -0.38
PVT1-208ENST00000519481 ALDH8A1Q9H2A2 487 aaPredicted RBP12.7□□□□□ -0.38
PVT1-208ENST00000519481 ZSWIM5Q9P217 1185 aa12.7□□□□□ -0.38
PVT1-208ENST00000519481 MRPL11Q9Y3B7 192 aaKnown RBP12.7□□□□□ -0.38
PVT1-208ENST00000519481 LRRC37A2A6NM11 1700 aa12.7□□□□□ -0.38
PVT1-208ENST00000519481 TNKSO95271 1327 aa12.69□□□□□ -0.38
PVT1-208ENST00000519481 TRDNQ13061 729 aa12.69□□□□□ -0.38
PVT1-208ENST00000519481 GRIN2CQ14957 1233 aa12.69□□□□□ -0.38
PVT1-208ENST00000519481 IFIT1BQ5T764 474 aaKnown RBP12.69□□□□□ -0.38
PVT1-208ENST00000519481 RASIP1Q5U651 963 aa12.69□□□□□ -0.38
PVT1-208ENST00000519481 FBXO11Q86XK2 927 aa12.69□□□□□ -0.38
PVT1-208ENST00000519481 ADGRF4Q8IZF3 695 aa12.69□□□□□ -0.38
PVT1-208ENST00000519481 ENAHQ8N8S7 591 aaPredicted RBP12.69□□□□□ -0.38
PVT1-208ENST00000519481 NSUN6Q8TEA1 469 aaKnown RBP12.69□□□□□ -0.38
PVT1-208ENST00000519481 RUFY2Q8WXA3 655 aa12.69□□□□□ -0.38
PVT1-208ENST00000519481 CPVLQ9H3G5 476 aa12.69□□□□□ -0.38
PVT1-208ENST00000519481 UMODL1Q5DID0 1318 aa12.68□□□□□ -0.38
PVT1-208ENST00000519481 GRXCR1A8MXD5 290 aa12.68□□□□□ -0.38
PVT1-208ENST00000519481 PFKMP08237 780 aa12.68□□□□□ -0.38
PVT1-208ENST00000519481 STXBP2Q15833 593 aa12.68□□□□□ -0.38
PVT1-208ENST00000519481 NFRKBQ6P4R8 1299 aa12.68□□□□□ -0.38
PVT1-208ENST00000519481 OTOP2Q7RTS6 562 aa12.68□□□□□ -0.38
PVT1-208ENST00000519481 RETREG2Q8NC44 543 aa12.68□□□□□ -0.38
PVT1-208ENST00000519481 IWS1Q96ST2 819 aa12.68□□□□□ -0.38
PVT1-208ENST00000519481 PBX4Q9BYU1 374 aa12.68□□□□□ -0.38
PVT1-208ENST00000519481 VAT1LQ9HCJ6 419 aa12.68□□□□□ -0.38
PVT1-208ENST00000519481 NOD1Q9Y239 953 aa12.68□□□□□ -0.38
PVT1-208ENST00000519481 SLC4A7Q9Y6M7 1214 aa12.68□□□□□ -0.38
PVT1-208ENST00000519481 LCTP09848 1927 aa12.68□□□□□ -0.38
PVT1-208ENST00000519481 A6NJR5 290 aa12.67□□□□□ -0.38
PVT1-208ENST00000519481 ZBBXA8MT70 800 aa12.67□□□□□ -0.38
PVT1-208ENST00000519481 GH1P01241 217 aa12.67□□□□□ -0.38
PVT1-208ENST00000519481 CYP2C9P11712 490 aa12.67□□□□□ -0.38
PVT1-208ENST00000519481 ACTN1P12814 892 aa12.67□□□□□ -0.38
PVT1-208ENST00000519481 PBX2P40425 430 aa12.67□□□□□ -0.38
PVT1-208ENST00000519481 CHMP4BP1P59074 171 aa12.67□□□□□ -0.38
PVT1-208ENST00000519481 PTPN11Q06124 597 aaPredicted RBP12.67□□□□□ -0.38
PVT1-208ENST00000519481 TRAF1Q13077 416 aa12.67□□□□□ -0.38
PVT1-208ENST00000519481 QRICH1Q2TAL8 776 aa12.67□□□□□ -0.38
PVT1-208ENST00000519481 NBPF20Q3BBV1 942 aa12.67□□□□□ -0.38
PVT1-208ENST00000519481 ARHGEF16Q5VV41 709 aa12.67□□□□□ -0.38
PVT1-208ENST00000519481 SYTL5Q8TDW5 730 aaPredicted RBP12.67□□□□□ -0.38
PVT1-208ENST00000519481 RMDN3Q96TC7 470 aa12.67□□□□□ -0.38
PVT1-208ENST00000519481 COL25A1Q9BXS0 654 aaPredicted RBP12.67□□□□□ -0.38
PVT1-208ENST00000519481 SLC28A3Q9HAS3 691 aa12.67□□□□□ -0.38
PVT1-208ENST00000519481 TRMT13Q9NUP7 481 aaKnown RBP12.67□□□□□ -0.38
PVT1-208ENST00000519481 MYO9BQ13459 2157 aa12.66□□□□□ -0.38
PVT1-208ENST00000519481 ERICH2A1L162 156 aa12.66□□□□□ -0.38
PVT1-208ENST00000519481 CFBP00751 764 aa12.66□□□□□ -0.38
PVT1-208ENST00000519481 RFC2P35250 354 aa12.66□□□□□ -0.38
PVT1-208ENST00000519481 BFSP2Q13515 415 aa12.66□□□□□ -0.38
PVT1-208ENST00000519481 SEPT14Q6ZU15 432 aa12.66□□□□□ -0.38
PVT1-208ENST00000519481 CCDC155Q8N6L0 562 aa12.66□□□□□ -0.38
PVT1-208ENST00000519481 SYMPKQ92797 1274 aaKnown RBP12.66□□□□□ -0.38
PVT1-208ENST00000519481 COPS5Q92905 334 aa12.66□□□□□ -0.38
PVT1-208ENST00000519481 SCLYQ96I15 445 aa12.66□□□□□ -0.38
PVT1-208ENST00000519481 TAAR1Q96RJ0 339 aa12.66□□□□□ -0.38
PVT1-208ENST00000519481 AMNQ9BXJ7 453 aa12.66□□□□□ -0.38
PVT1-208ENST00000519481 WNT8AQ9H1J5 351 aa12.66□□□□□ -0.38
PVT1-208ENST00000519481 JMJD4Q9H9V9 463 aa12.66□□□□□ -0.38
PVT1-208ENST00000519481 CXXC1Q9P0U4 656 aaPredicted RBP12.66□□□□□ -0.38
PVT1-208ENST00000519481 LAMA4Q16363 1823 aa12.66□□□□□ -0.38
PVT1-208ENST00000519481 KLRF2D3W0D1 207 aa12.65□□□□□ -0.38
PVT1-208ENST00000519481 CASTP20810 708 aaKnown RBP12.65□□□□□ -0.38
PVT1-208ENST00000519481 SART3Q15020 963 aaKnown RBP12.65□□□□□ -0.38
PVT1-208ENST00000519481 TTC22Q5TAA0 569 aa12.65□□□□□ -0.38
PVT1-208ENST00000519481 CHST3Q7LGC8 479 aa12.65□□□□□ -0.38
PVT1-208ENST00000519481 DEFB128Q7Z7B8 93 aa12.65□□□□□ -0.38
PVT1-208ENST00000519481 RALYLQ86SE5 291 aaKnown RBP12.65□□□□□ -0.38
PVT1-208ENST00000519481 SAMD3Q8N6K7 520 aa12.65□□□□□ -0.38
PVT1-208ENST00000519481 TBC1D5Q92609 795 aa12.65□□□□□ -0.38
PVT1-208ENST00000519481 NKX2-4Q9H2Z4 354 aa12.65□□□□□ -0.38
PVT1-208ENST00000519481 PRDM12Q9H4Q4 367 aa12.65□□□□□ -0.38
PVT1-208ENST00000519481 PITPNM1O00562 1244 aa12.64□□□□□ -0.39
PVT1-208ENST00000519481 EIF3JO75822 258 aaKnown RBP12.64□□□□□ -0.39
PVT1-208ENST00000519481 ARIH2O95376 493 aa12.64□□□□□ -0.39
PVT1-208ENST00000519481 ATP2A2P16615 1042 aaKnown RBP12.64□□□□□ -0.39
PVT1-208ENST00000519481 EIF2AK2P19525 551 aaKnown RBP12.64□□□□□ -0.39
PVT1-208ENST00000519481 IGFBP4P22692 258 aa12.64□□□□□ -0.39
PVT1-208ENST00000519481 DGKDQ16760 1214 aa12.64□□□□□ -0.39
PVT1-208ENST00000519481 LY6KQ17RY6 165 aa12.64□□□□□ -0.39
PVT1-208ENST00000519481 CCDC62Q6P9F0 684 aa12.64□□□□□ -0.39
PVT1-208ENST00000519481 AFG1LQ8WV93 481 aa12.64□□□□□ -0.39
PVT1-208ENST00000519481 FTOQ9C0B1 505 aaKnown RBP eCLIP12.64□□□□□ -0.39
PVT1-208ENST00000519481 MAP3K20Q9NYL2 800 aaKnown RBP12.64□□□□□ -0.39
PVT1-208ENST00000519481 SUPT16HQ9Y5B9 1047 aaKnown RBP12.64□□□□□ -0.39
PVT1-208ENST00000519481 PCDHA11Q9Y5I1 949 aa12.64□□□□□ -0.39
PVT1-208ENST00000519481 MRVI1Q9Y6F6 885 aa12.64□□□□□ -0.39
PVT1-208ENST00000519481 IFIT3O14879 490 aaKnown RBP12.63□□□□□ -0.39
PVT1-208ENST00000519481 ZBTB5O15062 677 aa12.63□□□□□ -0.39
PVT1-208ENST00000519481 NR3C2P08235 984 aa12.63□□□□□ -0.39
PVT1-208ENST00000519481 MMP3P08254 477 aa12.63□□□□□ -0.39
PVT1-208ENST00000519481 ARHGAP1Q07960 439 aa12.63□□□□□ -0.39
PVT1-208ENST00000519481 LAMC2Q13753 1193 aa12.63□□□□□ -0.39
PVT1-208ENST00000519481 SEC23AQ15436 765 aa12.63□□□□□ -0.39
PVT1-208ENST00000519481 PPP2R2DQ66LE6 453 aa12.63□□□□□ -0.39
PVT1-208ENST00000519481 KCNV1Q6PIU1 500 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms