RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 NFIBO00712 420 aa8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 SNPHO15079 494 aa8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 PPP1R11O60927 126 aaPredicted RBP8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 DEXIO95424 95 aa8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 LARGE1O95461 756 aa8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 XRCC5P13010 732 aaKnown RBP8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 SCG2P13521 617 aa8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 CYP2B6P20813 491 aa8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 CAP1Q01518 475 aa8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 IRF5Q13568 498 aa8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 NBR1Q14596 966 aa8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 PFKFB3Q16875 520 aaPredicted RBP8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 FBXO46Q6PJ61 603 aaPredicted RBP8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 CCDC83Q8IWF9 413 aa8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 CLEC4DQ8WXI8 215 aa8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 WASF1Q92558 559 aa8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 USP6NLQ92738 828 aa8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 CUL5Q93034 780 aa8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 MPHOSPH6Q99547 160 aaKnown RBP8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 LLPHQ9BRT6 129 aaKnown RBP8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 A1CFQ9NQ94 594 aaKnown RBP8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 DIS3Q9Y2L1 958 aaKnown RBP8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 PCDHGA4Q9Y5G9 962 aa8.85□□□□□ -0.99
CSGALNACT1-206ENST00000518542 B4DLN1 442 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 GCOM1H8Y6P7 765 aaPredicted RBP8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 ADCY3O60266 1144 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 PPFIA3O75145 1194 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 CFBP00751 764 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 PGK2P07205 417 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 HOXC6P09630 235 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 POLR2MP0CAP2 368 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 TAL1P17542 331 aaPredicted RBP8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 XBP1P17861 261 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 CALML3P27482 149 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 GRK4P32298 578 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 MRPL12P52815 198 aaKnown RBP8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 NAPAP54920 295 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 RPS6P62753 249 aaKnown RBP8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 BAATQ14032 418 aaPredicted RBP8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 WWC2Q6AWC2 1192 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 PPP1R18Q6NYC8 613 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 TEX2Q8IWB9 1127 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 ZNF710Q8N1W2 664 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 CCDC148Q8NFR7 591 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 PXYLP1Q8TE99 480 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 GPKOWQ92917 476 aaPredicted RBP eCLIP8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 TMX3Q96JJ7 454 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 GLT8D2Q9H1C3 349 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 PSTPIP2Q9H939 334 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 SH3GLB2Q9NR46 395 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 BARHL2Q9NY43 387 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 CYP39A1Q9NYL5 469 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 ORC3Q9UBD5 711 aaPredicted RBP8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 BIN2Q9UBW5 565 aaPredicted RBP8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 ADD3Q9UEY8 706 aaKnown RBP8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 PTCH2Q9Y6C5 1203 aa8.84□□□□□ -0.99
CSGALNACT1-206ENST00000518542 STK36Q9NRP7 1315 aa8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 DNAJC25-GNG10A0A024R161 153 aa8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 ASB14A6NK59 587 aa8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 STXBP3O00186 592 aa8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 COBLO75128 1261 aa8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 CD2BP2O95400 341 aaKnown RBP8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 GNA11P29992 359 aa8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 HMGN5P82970 282 aaKnown RBP8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 PKN1Q16512 942 aa8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 ZNF792Q3KQV3 632 aa8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 SLC9C1Q4G0N8 1177 aa8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 HABP4Q5JVS0 413 aaKnown RBP8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 MFSD14CQ5VZR4 134 aa8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 OLFML2BQ68BL8 750 aa8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 HSCBQ8IWL3 235 aa8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 FAM177A1Q8N128 213 aaPredicted RBP8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 SMARCC2Q8TAQ2 1214 aa8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 NPLOC4Q8TAT6 608 aa8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 SNX21Q969T3 373 aa8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 MAML3Q96JK9 1138 aa8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 C6orf50Q9HD87 102 aa8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 KIF3AQ9Y496 699 aa8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.83□□□□□ -1
CSGALNACT1-206ENST00000518542 LOC102724159A0A0B4J2E5 919 aa8.82□□□□□ -1
CSGALNACT1-206ENST00000518542 SMCO2A6NFE2 343 aa8.82□□□□□ -1
CSGALNACT1-206ENST00000518542 PIK3CDO00329 1044 aa8.82□□□□□ -1
CSGALNACT1-206ENST00000518542 CTDNEP1O95476 244 aa8.82□□□□□ -1
CSGALNACT1-206ENST00000518542 HMGCRP04035 888 aa8.82□□□□□ -1
CSGALNACT1-206ENST00000518542 ELNP15502 786 aa8.82□□□□□ -1
CSGALNACT1-206ENST00000518542 HSD17B4P51659 736 aa8.82□□□□□ -1
CSGALNACT1-206ENST00000518542 ADCY7P51828 1080 aa8.82□□□□□ -1
CSGALNACT1-206ENST00000518542 NLRP5P59047 1200 aa8.82□□□□□ -1
CSGALNACT1-206ENST00000518542 UBXN2AP68543 259 aa8.82□□□□□ -1
CSGALNACT1-206ENST00000518542 CNTN2Q02246 1040 aa8.82□□□□□ -1
CSGALNACT1-206ENST00000518542 GHRHRQ02643 423 aa8.82□□□□□ -1
CSGALNACT1-206ENST00000518542 BECN1Q14457 450 aa8.82□□□□□ -1
CSGALNACT1-206ENST00000518542 PWP2Q15269 919 aaKnown RBP8.82□□□□□ -1
CSGALNACT1-206ENST00000518542 SLC30A10Q6XR72 485 aa8.82□□□□□ -1
CSGALNACT1-206ENST00000518542 MSL3Q8N5Y2 521 aaKnown RBP8.82□□□□□ -1
CSGALNACT1-206ENST00000518542 FAM133AQ8N9E0 248 aa8.82□□□□□ -1
CSGALNACT1-206ENST00000518542 FAM184AQ8NB25 1140 aa8.82□□□□□ -1
CSGALNACT1-206ENST00000518542 NSUN7Q8NE18 718 aaKnown RBP8.82□□□□□ -1
CSGALNACT1-206ENST00000518542 DNERQ8NFT8 737 aa8.82□□□□□ -1
CSGALNACT1-206ENST00000518542 BICD2Q8TD16 824 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms