RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 SSU72P8A0A1W2PR75 194 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 TTC26A0AVF1 554 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 MACROD2A1Z1Q3 448 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 GMNCA6NCL1 334 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 LGALS16A8MUM7 142 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 NBPF26B4DH59 902 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 KIF28PB7ZC32 967 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 TMEM232C9JQI7 657 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 KLRF2D3W0D1 207 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 TULP2O00295 520 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 CES2O00748 559 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 ATP2A1O14983 1001 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 TRIM66O15016 1216 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 CHUKO15111 745 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 TEX33O43247 280 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 RNF40O75150 1001 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 BBOX1O75936 387 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 ATP5HO75947 161 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 GFPT2O94808 682 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 SEC31AO94979 1220 aaKnown RBP2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 KIF4AO95239 1232 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 SLC34A2O95436 690 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 FOSP01100 380 aaPredicted RBP2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 HLA-DOAP06340 250 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 OR52Z1P0C646 297 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 SRGNP10124 158 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 EPB41P11171 864 aaKnown RBP2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 KRT13P13646 458 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 FERP16591 822 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 TNFAIP3P21580 790 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 ADORA1P30542 326 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 ALDH3A1P30838 453 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 ABCD1P33897 745 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 NF2P35240 595 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 MAP2K2P36507 400 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 GGCXP38435 758 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 STAT1P42224 750 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 TECP42680 631 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 TXKP42681 527 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 PHKA1P46020 1223 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 AARSP49588 968 aaKnown RBP eCLIP2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 TOB1P50616 345 aaPredicted RBP2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 RASSF2P50749 326 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 BCAMP50895 628 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 IRAK1P51617 712 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 USP11P51784 963 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 NPEPPSP55786 919 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 CORO7P57737 925 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 ANTXR2P58335 489 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 GNGT1P63211 74 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 IRX5P78411 483 aaPredicted RBP2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 CHRNDQ07001 517 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 RAD51AP2Q09MP3 1159 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 KLHL30Q0D2K2 578 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 NR5A1Q13285 461 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 ADAM9Q13443 819 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 CUL4BQ13620 913 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 TTLL12Q14166 644 aaPredicted RBP2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 CHRNA2Q15822 529 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 SEPT7Q16181 437 aaKnown RBP2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 ASIC2Q16515 512 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 DDB1Q16531 1140 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 CALCRLQ16602 461 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 LETM2Q2VYF4 491 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 COBLL1Q53SF7 1204 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 TDRD12Q587J7 1177 aaKnown RBP2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 SPDYCQ5MJ68 293 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 GPATCH4Q5T3I0 446 aaKnown RBP2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 GKAP1Q5VSY0 366 aaPredicted RBP2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 ICE2Q659A1 982 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 HAUS3Q68CZ6 603 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 PPP1R2P3Q6NXS1 205 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 NBPF10Q6P3W6 841 aaKnown RBP2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 LRIG3Q6UXM1 1119 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 MMS22LQ6ZRQ5 1243 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 TOGARAM2Q6ZUX3 1019 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 UNC13DQ70J99 1090 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 SND1Q7KZF4 910 aaKnown RBP eCLIP2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 RRAGAQ7L523 313 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 TRAPPC11Q7Z392 1133 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 TMC4Q7Z404 712 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 PEX26Q7Z412 305 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 HEATR3Q7Z4Q2 680 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 YTHDF3Q7Z739 585 aaKnown RBP2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 ILDR1Q86SU0 546 aaPredicted RBP2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 SRLQ86TD4 932 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 HOOK3Q86VS8 718 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 RAB11FIP4Q86YS3 637 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 FOXP4Q8IVH2 680 aaPredicted RBP2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 DNAJC10Q8IXB1 793 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 TRMT44Q8IYL2 757 aaKnown RBP2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 MYOCDQ8IZQ8 938 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 REXO1Q8N1G1 1221 aaKnown RBP2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 GUF1Q8N442 669 aaKnown RBP2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 PIP4P2Q8N4L2 257 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 NBPF15Q8N660 670 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 UBL4BQ8N7F7 174 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 GBP7Q8N8V2 638 aaPredicted RBP2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 MIGA1Q8NAN2 632 aa2.27□□□□□ -2.05
RNU1-40P-201ENST00000516816 DAGLBQ8NCG7 672 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms