RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 SNX14Q9Y5W7 946 aa12.96□□□□□ -0.33
SCARNA16.1-201ENST00000516133 NKRFO15226 690 aaKnown RBP eCLIP12.95□□□□□ -0.34
SCARNA16.1-201ENST00000516133 EIF5BO60841 1220 aaKnown RBP12.95□□□□□ -0.34
SCARNA16.1-201ENST00000516133 EIF3JO75822 258 aaKnown RBP12.95□□□□□ -0.34
SCARNA16.1-201ENST00000516133 ASGR1P07306 291 aa12.95□□□□□ -0.34
SCARNA16.1-201ENST00000516133 RXRAP19793 462 aa12.95□□□□□ -0.34
SCARNA16.1-201ENST00000516133 RCAN1P53805 252 aa12.95□□□□□ -0.34
SCARNA16.1-201ENST00000516133 FSCN1Q16658 493 aaKnown RBP12.95□□□□□ -0.34
SCARNA16.1-201ENST00000516133 HABP4Q5JVS0 413 aaKnown RBP12.95□□□□□ -0.34
SCARNA16.1-201ENST00000516133 CHRDL2Q6WN34 429 aa12.95□□□□□ -0.34
SCARNA16.1-201ENST00000516133 TMTC3Q6ZXV5 915 aa12.95□□□□□ -0.34
SCARNA16.1-201ENST00000516133 MICU3Q86XE3 530 aa12.95□□□□□ -0.34
SCARNA16.1-201ENST00000516133 FBXL16Q8N461 479 aa12.95□□□□□ -0.34
SCARNA16.1-201ENST00000516133 PIBF1Q8WXW3 757 aa12.95□□□□□ -0.34
SCARNA16.1-201ENST00000516133 VTI1AQ96AJ9 217 aa12.95□□□□□ -0.34
SCARNA16.1-201ENST00000516133 TCEANC2Q96MN5 208 aa12.95□□□□□ -0.34
SCARNA16.1-201ENST00000516133 USP26Q9BXU7 913 aa12.95□□□□□ -0.34
SCARNA16.1-201ENST00000516133 STARD7Q9NQZ5 370 aa12.95□□□□□ -0.34
SCARNA16.1-201ENST00000516133 COL20A1Q9P218 1284 aa12.95□□□□□ -0.34
SCARNA16.1-201ENST00000516133 ZMYND8Q9ULU4 1186 aaPredicted RBP12.95□□□□□ -0.34
SCARNA16.1-201ENST00000516133 ATP11BQ9Y2G3 1177 aa12.95□□□□□ -0.34
SCARNA16.1-201ENST00000516133 CCDC196A0A1B0GTZ2 297 aa12.94□□□□□ -0.34
SCARNA16.1-201ENST00000516133 MYADML2A6NDP7 307 aa12.94□□□□□ -0.34
SCARNA16.1-201ENST00000516133 CTAGE5O15320 804 aa12.94□□□□□ -0.34
SCARNA16.1-201ENST00000516133 CABYRO75952 493 aa12.94□□□□□ -0.34
SCARNA16.1-201ENST00000516133 PLEKHA8P1O95397 391 aa12.94□□□□□ -0.34
SCARNA16.1-201ENST00000516133 NR3C2P08235 984 aa12.94□□□□□ -0.34
SCARNA16.1-201ENST00000516133 TXNP10599 105 aaKnown RBP12.94□□□□□ -0.34
SCARNA16.1-201ENST00000516133 SYN1P17600 705 aa12.94□□□□□ -0.34
SCARNA16.1-201ENST00000516133 HOXA13P31271 388 aaPredicted RBP12.94□□□□□ -0.34
SCARNA16.1-201ENST00000516133 BMP8BP34820 402 aa12.94□□□□□ -0.34
SCARNA16.1-201ENST00000516133 TTLL4Q14679 1199 aa12.94□□□□□ -0.34
SCARNA16.1-201ENST00000516133 RTN1Q16799 776 aa12.94□□□□□ -0.34
SCARNA16.1-201ENST00000516133 TRIM60Q495X7 471 aa12.94□□□□□ -0.34
SCARNA16.1-201ENST00000516133 BRDTQ58F21 947 aaPredicted RBP12.94□□□□□ -0.34
SCARNA16.1-201ENST00000516133 CCDC82Q8N4S0 544 aa12.94□□□□□ -0.34
SCARNA16.1-201ENST00000516133 TOX2Q96NM4 488 aa12.94□□□□□ -0.34
SCARNA16.1-201ENST00000516133 PXMP2Q9NR77 195 aa12.94□□□□□ -0.34
SCARNA16.1-201ENST00000516133 BRPF3Q9ULD4 1205 aa12.94□□□□□ -0.34
SCARNA16.1-201ENST00000516133 KLF18A0A0U1RQI7 1052 aa12.93□□□□□ -0.34
SCARNA16.1-201ENST00000516133 A0A1W2PPC1 479 aa12.93□□□□□ -0.34
SCARNA16.1-201ENST00000516133 DCDC2CA8MYV0 355 aa12.93□□□□□ -0.34
SCARNA16.1-201ENST00000516133 EIF2AK2P19525 551 aaKnown RBP12.93□□□□□ -0.34
SCARNA16.1-201ENST00000516133 RPS6KB1P23443 525 aa12.93□□□□□ -0.34
SCARNA16.1-201ENST00000516133 CPT1AP50416 773 aa12.93□□□□□ -0.34
SCARNA16.1-201ENST00000516133 IRX5P78411 483 aaPredicted RBP12.93□□□□□ -0.34
SCARNA16.1-201ENST00000516133 BEX3Q00994 111 aa12.93□□□□□ -0.34
SCARNA16.1-201ENST00000516133 TLE2Q04725 743 aa12.93□□□□□ -0.34
SCARNA16.1-201ENST00000516133 Q6ZUG5 572 aa12.93□□□□□ -0.34
SCARNA16.1-201ENST00000516133 ANKRD33Q7Z3H0 272 aa12.93□□□□□ -0.34
SCARNA16.1-201ENST00000516133 VSIG10LQ86VR7 867 aa12.93□□□□□ -0.34
SCARNA16.1-201ENST00000516133 RAB11FIP4Q86YS3 637 aa12.93□□□□□ -0.34
SCARNA16.1-201ENST00000516133 CMTR1Q8N1G2 835 aaKnown RBP12.93□□□□□ -0.34
SCARNA16.1-201ENST00000516133 CUL5Q93034 780 aa12.93□□□□□ -0.34
SCARNA16.1-201ENST00000516133 GDF15Q99988 308 aa12.93□□□□□ -0.34
SCARNA16.1-201ENST00000516133 LBHD1Q9BQE6 289 aaPredicted RBP12.93□□□□□ -0.34
SCARNA16.1-201ENST00000516133 SEZ6LQ9BYH1 1024 aa12.93□□□□□ -0.34
SCARNA16.1-201ENST00000516133 PRO3102Q9H379 93 aa12.93□□□□□ -0.34
SCARNA16.1-201ENST00000516133 RBM27Q9P2N5 1060 aaKnown RBP12.93□□□□□ -0.34
SCARNA16.1-201ENST00000516133 MROH7Q68CQ1 1323 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 LCTP09848 1927 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 ALPK3Q96L96 1907 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 PIK3CDO00329 1044 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 KPNA6O60684 536 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 CPA1P15085 419 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 CASTP20810 708 aaKnown RBP12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 CDK7P50613 346 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 TMEM63BQ5T3F8 832 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 CCDC62Q6P9F0 684 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 KCNV1Q6PIU1 500 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 CXCL17Q6UXB2 119 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 SEPT14Q6ZU15 432 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 FCHSD1Q86WN1 690 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 TEX2Q8IWB9 1127 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 OR6J1Q8NGC5 347 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 BRF1Q92994 677 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 PDCD2LQ9BRP1 358 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 AGXT2Q9BYV1 514 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 TM6SF1Q9BZW5 370 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 PSTPIP2Q9H939 334 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 ZSWIM6Q9HCJ5 1215 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 POLR3EQ9NVU0 708 aa12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 NAP1L2Q9ULW6 460 aaPredicted RBP12.92□□□□□ -0.34
SCARNA16.1-201ENST00000516133 A0A0U1RQG5 324 aaPredicted RBP12.91□□□□□ -0.34
SCARNA16.1-201ENST00000516133 A6NJR5 290 aa12.91□□□□□ -0.34
SCARNA16.1-201ENST00000516133 GOLGA8AA7E2F4 631 aa12.91□□□□□ -0.34
SCARNA16.1-201ENST00000516133 GOLGA8BA8MQT2 603 aa12.91□□□□□ -0.34
SCARNA16.1-201ENST00000516133 ARVCFO00192 962 aa12.91□□□□□ -0.34
SCARNA16.1-201ENST00000516133 PQBP1O60828 265 aaKnown RBP12.91□□□□□ -0.34
SCARNA16.1-201ENST00000516133 CLTBP09497 229 aa12.91□□□□□ -0.34
SCARNA16.1-201ENST00000516133 TGFB3P10600 412 aa12.91□□□□□ -0.34
SCARNA16.1-201ENST00000516133 MYCLP12524 364 aaPredicted RBP12.91□□□□□ -0.34
SCARNA16.1-201ENST00000516133 CCND2P30279 289 aa12.91□□□□□ -0.34
SCARNA16.1-201ENST00000516133 MAGEA10P43363 369 aaPredicted RBP12.91□□□□□ -0.34
SCARNA16.1-201ENST00000516133 RUFY3Q7L099 469 aa12.91□□□□□ -0.34
SCARNA16.1-201ENST00000516133 SMARCC2Q8TAQ2 1214 aa12.91□□□□□ -0.34
SCARNA16.1-201ENST00000516133 PRDM5Q9NQX1 630 aaPredicted RBP12.91□□□□□ -0.34
SCARNA16.1-201ENST00000516133 CYP46A1Q9Y6A2 500 aa12.91□□□□□ -0.34
SCARNA16.1-201ENST00000516133 V9GY48 417 aaPredicted RBP12.91□□□□□ -0.34
SCARNA16.1-201ENST00000516133 hCG_1642624A0A1W2PR95 340 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms