RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 CDKL5O76039 1030 aa29.88■■■□□ 2.37
DDR1-279ENST00000515529 SCG2P13521 617 aa29.88■■■□□ 2.37
DDR1-279ENST00000515529 EIF2AK2P19525 551 aaKnown RBP29.88■■■□□ 2.37
DDR1-279ENST00000515529 SSRP1Q08945 709 aaKnown RBP29.88■■■□□ 2.37
DDR1-279ENST00000515529 CCDC144BQ3MJ40 725 aa29.88■■■□□ 2.37
DDR1-279ENST00000515529 MCM3APO60318 1980 aa29.88■■■□□ 2.37
DDR1-279ENST00000515529 MYCNP04198 464 aaPredicted RBP29.87■■■□□ 2.37
DDR1-279ENST00000515529 NTRK3Q16288 839 aa29.87■■■□□ 2.37
DDR1-279ENST00000515529 PFKFB3Q16875 520 aaPredicted RBP29.87■■■□□ 2.37
DDR1-279ENST00000515529 ARRDC4Q8NCT1 418 aa29.87■■■□□ 2.37
DDR1-279ENST00000515529 XPNPEP3Q9NQH7 507 aa29.87■■■□□ 2.37
DDR1-279ENST00000515529 PXMP2Q9NR77 195 aa29.87■■■□□ 2.37
DDR1-279ENST00000515529 BARHL2Q9NY43 387 aa29.87■■■□□ 2.37
DDR1-279ENST00000515529 PFKFB2O60825 505 aa29.86■■■□□ 2.37
DDR1-279ENST00000515529 EDNRBP24530 442 aa29.86■■■□□ 2.37
DDR1-279ENST00000515529 MLLT1Q03111 559 aaPredicted RBP29.86■■■□□ 2.37
DDR1-279ENST00000515529 STXBP2Q15833 593 aa29.86■■■□□ 2.37
DDR1-279ENST00000515529 CCDC12Q8WUD4 166 aaPredicted RBP29.86■■■□□ 2.37
DDR1-279ENST00000515529 KATNBL1Q9H079 304 aa29.86■■■□□ 2.37
DDR1-279ENST00000515529 PIK3CDO00329 1044 aa29.85■■■□□ 2.37
DDR1-279ENST00000515529 PPFIA3O75145 1194 aa29.85■■■□□ 2.37
DDR1-279ENST00000515529 ADCY7P51828 1080 aa29.85■■■□□ 2.37
DDR1-279ENST00000515529 SCRN1Q12765 414 aa29.85■■■□□ 2.37
DDR1-279ENST00000515529 RABEP1Q15276 862 aa29.85■■■□□ 2.37
DDR1-279ENST00000515529 USP17L6PQ6QN14 398 aa29.85■■■□□ 2.37
DDR1-279ENST00000515529 BACH2Q9BYV9 841 aa29.85■■■□□ 2.37
DDR1-279ENST00000515529 GLT8D2Q9H1C3 349 aa29.85■■■□□ 2.37
DDR1-279ENST00000515529 STXBP3O00186 592 aa29.84■■■□□ 2.37
DDR1-279ENST00000515529 TNFAIP2Q03169 654 aa29.84■■■□□ 2.37
DDR1-279ENST00000515529 IQSEC1Q6DN90 963 aa29.84■■■□□ 2.37
DDR1-279ENST00000515529 KIF2CQ99661 725 aa29.84■■■□□ 2.37
DDR1-279ENST00000515529 SPC25Q9HBM1 224 aa29.84■■■□□ 2.37
DDR1-279ENST00000515529 DUSP11O75319 330 aaKnown RBP29.83■■■□□ 2.37
DDR1-279ENST00000515529 NR3C2P08235 984 aa29.83■■■□□ 2.37
DDR1-279ENST00000515529 MYCLP12524 364 aaPredicted RBP29.83■■■□□ 2.37
DDR1-279ENST00000515529 ADCYAP1R1P41586 468 aa29.83■■■□□ 2.37
DDR1-279ENST00000515529 NECAB2Q7Z6G3 386 aa29.83■■■□□ 2.37
DDR1-279ENST00000515529 LENG1Q96BZ8 264 aaPredicted RBP29.83■■■□□ 2.37
DDR1-279ENST00000515529 SMCO2A6NFE2 343 aa29.82■■■□□ 2.36
DDR1-279ENST00000515529 SPDYE3A6NKU9 549 aa29.82■■■□□ 2.36
DDR1-279ENST00000515529 KBTBD13C9JR72 458 aa29.82■■■□□ 2.36
DDR1-279ENST00000515529 MEIS2O14770 477 aa29.82■■■□□ 2.36
DDR1-279ENST00000515529 TAPT1Q6NXT6 567 aa29.82■■■□□ 2.36
DDR1-279ENST00000515529 RNF180Q86T96 592 aa29.82■■■□□ 2.36
DDR1-279ENST00000515529 TEX2Q8IWB9 1127 aa29.82■■■□□ 2.36
DDR1-279ENST00000515529 TBC1D32Q96NH3 1257 aa29.82■■■□□ 2.36
DDR1-279ENST00000515529 PDCD2LQ9BRP1 358 aa29.82■■■□□ 2.36
DDR1-279ENST00000515529 EHMT1Q9H9B1 1298 aa29.82■■■□□ 2.36
DDR1-279ENST00000515529 RIC8AQ9NPQ8 531 aa29.82■■■□□ 2.36
DDR1-279ENST00000515529 PDGFCQ9NRA1 345 aa29.82■■■□□ 2.36
DDR1-279ENST00000515529 LIMCH1Q9UPQ0 1083 aa29.82■■■□□ 2.36
DDR1-279ENST00000515529 DEXIO95424 95 aa29.81■■■□□ 2.36
DDR1-279ENST00000515529 CCND2P30279 289 aa29.81■■■□□ 2.36
DDR1-279ENST00000515529 PGM5Q15124 567 aa29.81■■■□□ 2.36
DDR1-279ENST00000515529 PKN1Q16512 942 aa29.81■■■□□ 2.36
DDR1-279ENST00000515529 UBE2SQ16763 222 aa29.81■■■□□ 2.36
DDR1-279ENST00000515529 ME3Q16798 604 aa29.81■■■□□ 2.36
DDR1-279ENST00000515529 CCDC148Q8NFR7 591 aa29.81■■■□□ 2.36
DDR1-279ENST00000515529 SCFD2Q8WU76 684 aa29.81■■■□□ 2.36
DDR1-279ENST00000515529 PAWRQ96IZ0 340 aaKnown RBP29.81■■■□□ 2.36
DDR1-279ENST00000515529 LRRC37A2A6NM11 1700 aa29.8■■■□□ 2.36
DDR1-279ENST00000515529 DNM1LO00429 736 aa29.8■■■□□ 2.36
DDR1-279ENST00000515529 ST18O60284 1047 aa29.8■■■□□ 2.36
DDR1-279ENST00000515529 EIF3JO75822 258 aaKnown RBP29.8■■■□□ 2.36
DDR1-279ENST00000515529 PGK1P00558 417 aa29.8■■■□□ 2.36
DDR1-279ENST00000515529 GJC2Q5T442 439 aaPredicted RBP29.8■■■□□ 2.36
DDR1-279ENST00000515529 TYW1BQ6NUM6 668 aa29.8■■■□□ 2.36
DDR1-279ENST00000515529 IL27Q8NEV9 243 aa29.8■■■□□ 2.36
DDR1-279ENST00000515529 DIS3LQ8TF46 1054 aaKnown RBP29.8■■■□□ 2.36
DDR1-279ENST00000515529 WDR11Q9BZH6 1224 aa29.8■■■□□ 2.36
DDR1-279ENST00000515529 FRMPD3Q5JV73 1810 aa29.8■■■□□ 2.36
DDR1-279ENST00000515529 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.79■■■□□ 2.36
DDR1-279ENST00000515529 TTLL4Q14679 1199 aa29.79■■■□□ 2.36
DDR1-279ENST00000515529 LRRC41Q15345 812 aa29.79■■■□□ 2.36
DDR1-279ENST00000515529 SEPT14Q6ZU15 432 aa29.79■■■□□ 2.36
DDR1-279ENST00000515529 NECAB1Q8N987 351 aa29.79■■■□□ 2.36
DDR1-279ENST00000515529 GTF3C6Q969F1 213 aa29.79■■■□□ 2.36
DDR1-279ENST00000515529 AP5M1Q9H0R1 490 aa29.79■■■□□ 2.36
DDR1-279ENST00000515529 C11orf49Q9H6J7 331 aa29.79■■■□□ 2.36
DDR1-279ENST00000515529 C6orf50Q9HD87 102 aa29.79■■■□□ 2.36
DDR1-279ENST00000515529 SYNRGQ9UMZ2 1314 aa29.78■■■□□ 2.36
DDR1-279ENST00000515529 C6orf222P0C671 652 aaPredicted RBP29.78■■■□□ 2.36
DDR1-279ENST00000515529 SMPD1P17405 629 aa29.78■■■□□ 2.36
DDR1-279ENST00000515529 ZSCAN31Q96LW9 406 aaPredicted RBP29.78■■■□□ 2.36
DDR1-279ENST00000515529 HTATIP2Q9BUP3 242 aa29.78■■■□□ 2.36
DDR1-279ENST00000515529 RBM47A0AV96 593 aaKnown RBP29.77■■■□□ 2.36
DDR1-279ENST00000515529 LARGE1O95461 756 aa29.77■■■□□ 2.36
DDR1-279ENST00000515529 GNA11P29992 359 aa29.77■■■□□ 2.36
DDR1-279ENST00000515529 DUSP28Q4G0W2 176 aa29.77■■■□□ 2.36
DDR1-279ENST00000515529 TLK2Q86UE8 772 aa29.77■■■□□ 2.36
DDR1-279ENST00000515529 VSIG10LQ86VR7 867 aa29.77■■■□□ 2.36
DDR1-279ENST00000515529 FRMPD4Q14CM0 1322 aa29.76■■■□□ 2.36
DDR1-279ENST00000515529 ESYT2A0FGR8 921 aa29.76■■■□□ 2.35
DDR1-279ENST00000515529 NKRFO15226 690 aaKnown RBP eCLIP29.76■■■□□ 2.35
DDR1-279ENST00000515529 ADCY6O43306 1168 aa29.76■■■□□ 2.35
DDR1-279ENST00000515529 FOSP01100 380 aaPredicted RBP29.76■■■□□ 2.35
DDR1-279ENST00000515529 UBE2Q1Q7Z7E8 422 aa29.76■■■□□ 2.35
DDR1-279ENST00000515529 IL31RAQ8NI17 732 aa29.76■■■□□ 2.35
DDR1-279ENST00000515529 BICD2Q8TD16 824 aa29.76■■■□□ 2.35
DDR1-279ENST00000515529 SH3GLB2Q9NR46 395 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms