RNA–Protein interactions for RNA: ENST00000515467.2

SDHAP3-202, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

BASIC

Gene SDHAP3, Length 728 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-202ENST00000515467 COL20A1Q9P218 1284 aa18.32■□□□□ 0.52
SDHAP3-202ENST00000515467 PLXNA1Q9UIW2 1896 aa18.31■□□□□ 0.52
SDHAP3-202ENST00000515467 KBTBD13C9JR72 458 aa18.31■□□□□ 0.52
SDHAP3-202ENST00000515467 DNM1LO00429 736 aa18.31■□□□□ 0.52
SDHAP3-202ENST00000515467 NR3C2P08235 984 aa18.31■□□□□ 0.52
SDHAP3-202ENST00000515467 TAPT1Q6NXT6 567 aa18.31■□□□□ 0.52
SDHAP3-202ENST00000515467 NOL8Q76FK4 1167 aaKnown RBP18.31■□□□□ 0.52
SDHAP3-202ENST00000515467 EEPD1Q7L9B9 569 aa18.31■□□□□ 0.52
SDHAP3-202ENST00000515467 FCHSD1Q86WN1 690 aa18.31■□□□□ 0.52
SDHAP3-202ENST00000515467 IL27Q8NEV9 243 aa18.31■□□□□ 0.52
SDHAP3-202ENST00000515467 SMARCC2Q8TAQ2 1214 aa18.31■□□□□ 0.52
SDHAP3-202ENST00000515467 C11orf49Q9H6J7 331 aa18.31■□□□□ 0.52
SDHAP3-202ENST00000515467 BARHL2Q9NY43 387 aa18.31■□□□□ 0.52
SDHAP3-202ENST00000515467 Q9Y3F1 56 aa18.31■□□□□ 0.52
SDHAP3-202ENST00000515467 RBM47A0AV96 593 aaKnown RBP18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 EIF3JO75822 258 aaKnown RBP18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 SCG2P13521 617 aa18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 EIF2AK2P19525 551 aaKnown RBP18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 RBM25P49756 843 aaKnown RBP18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 MNX1P50219 401 aaPredicted RBP18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 AK2P54819 239 aa18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 NAPAP54920 295 aa18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 LRRC41Q15345 812 aa18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 NTRK3Q16288 839 aa18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 PFKFB3Q16875 520 aaPredicted RBP18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 WWC2Q6AWC2 1192 aa18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 FBXO16Q8IX29 292 aaPredicted RBP18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 TRIM22Q8IYM9 498 aa18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 SCFD2Q8WU76 684 aa18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 CCDC12Q8WUD4 166 aaPredicted RBP18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 LARP6Q9BRS8 491 aaKnown RBP18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 RNF26Q9BY78 433 aaPredicted RBP18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 SLKQ9H2G2 1235 aaPredicted RBP18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 NCOA5Q9HCD5 579 aaKnown RBP18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 PCDH10Q9P2E7 1040 aa18.3■□□□□ 0.52
SDHAP3-202ENST00000515467 MEIS2O14770 477 aa18.29■□□□□ 0.52
SDHAP3-202ENST00000515467 CDKL5O76039 1030 aa18.29■□□□□ 0.52
SDHAP3-202ENST00000515467 ADCYAP1R1P41586 468 aa18.29■□□□□ 0.52
SDHAP3-202ENST00000515467 SSRP1Q08945 709 aaKnown RBP18.29■□□□□ 0.52
SDHAP3-202ENST00000515467 STK3Q13188 491 aa18.29■□□□□ 0.52
SDHAP3-202ENST00000515467 GJC2Q5T442 439 aaPredicted RBP18.29■□□□□ 0.52
SDHAP3-202ENST00000515467 GPKOWQ92917 476 aaPredicted RBP eCLIP18.29■□□□□ 0.52
SDHAP3-202ENST00000515467 PDCD2LQ9BRP1 358 aa18.29■□□□□ 0.52
SDHAP3-202ENST00000515467 TSEN34Q9BSV6 310 aaKnown RBP18.29■□□□□ 0.52
SDHAP3-202ENST00000515467 WDR11Q9BZH6 1224 aa18.29■□□□□ 0.52
SDHAP3-202ENST00000515467 AP5M1Q9H0R1 490 aa18.29■□□□□ 0.52
SDHAP3-202ENST00000515467 UPF3AQ9H1J1 476 aaKnown RBP18.29■□□□□ 0.52
SDHAP3-202ENST00000515467 PDGFCQ9NRA1 345 aa18.29■□□□□ 0.52
SDHAP3-202ENST00000515467 DDX49Q9Y6V7 483 aaKnown RBP18.29■□□□□ 0.52
SDHAP3-202ENST00000515467 STXBP3O00186 592 aa18.28■□□□□ 0.52
SDHAP3-202ENST00000515467 NKRFO15226 690 aaKnown RBP eCLIP18.28■□□□□ 0.52
SDHAP3-202ENST00000515467 PFKFB2O60825 505 aa18.28■□□□□ 0.52
SDHAP3-202ENST00000515467 PGK1P00558 417 aa18.28■□□□□ 0.52
SDHAP3-202ENST00000515467 MYCNP04198 464 aaPredicted RBP18.28■□□□□ 0.52
SDHAP3-202ENST00000515467 COL6A1P12109 1028 aa18.28■□□□□ 0.52
SDHAP3-202ENST00000515467 CCND2P30279 289 aa18.28■□□□□ 0.52
SDHAP3-202ENST00000515467 GJA9P57773 515 aa18.28■□□□□ 0.52
SDHAP3-202ENST00000515467 DUSP28Q4G0W2 176 aa18.28■□□□□ 0.52
SDHAP3-202ENST00000515467 XRRA1Q6P2D8 792 aa18.28■□□□□ 0.52
SDHAP3-202ENST00000515467 USP17L6PQ6QN14 398 aa18.28■□□□□ 0.52
SDHAP3-202ENST00000515467 VSIG10LQ86VR7 867 aa18.28■□□□□ 0.52
SDHAP3-202ENST00000515467 DIS3LQ8TF46 1054 aaKnown RBP18.28■□□□□ 0.52
SDHAP3-202ENST00000515467 PHKBQ93100 1093 aa18.28■□□□□ 0.52
SDHAP3-202ENST00000515467 SLC26A6Q9BXS9 759 aa18.28■□□□□ 0.52
SDHAP3-202ENST00000515467 RIC8AQ9NPQ8 531 aa18.28■□□□□ 0.52
SDHAP3-202ENST00000515467 TPCN1Q9ULQ1 816 aa18.28■□□□□ 0.52
SDHAP3-202ENST00000515467 SMCO2A6NFE2 343 aa18.27■□□□□ 0.52
SDHAP3-202ENST00000515467 ADAMTS4O75173 837 aa18.27■□□□□ 0.52
SDHAP3-202ENST00000515467 STAM2O75886 525 aa18.27■□□□□ 0.52
SDHAP3-202ENST00000515467 FOSP01100 380 aaPredicted RBP18.27■□□□□ 0.52
SDHAP3-202ENST00000515467 MYCLP12524 364 aaPredicted RBP18.27■□□□□ 0.52
SDHAP3-202ENST00000515467 SMPD1P17405 629 aa18.27■□□□□ 0.52
SDHAP3-202ENST00000515467 ADCY7P51828 1080 aa18.27■□□□□ 0.52
SDHAP3-202ENST00000515467 NKX3-2P78367 333 aa18.27■□□□□ 0.52
SDHAP3-202ENST00000515467 TTLL4Q14679 1199 aa18.27■□□□□ 0.52
SDHAP3-202ENST00000515467 PGM5Q15124 567 aa18.27■□□□□ 0.52
SDHAP3-202ENST00000515467 MCTP2Q6DN12 878 aa18.27■□□□□ 0.52
SDHAP3-202ENST00000515467 KCNV1Q6PIU1 500 aa18.27■□□□□ 0.52
SDHAP3-202ENST00000515467 PCSK9Q8NBP7 692 aaKnown RBP18.27■□□□□ 0.52
SDHAP3-202ENST00000515467 KLHDC9Q8NEP7 349 aa18.27■□□□□ 0.52
SDHAP3-202ENST00000515467 EHMT1Q9H9B1 1298 aa18.27■□□□□ 0.52
SDHAP3-202ENST00000515467 GNEQ9Y223 722 aaKnown RBP18.27■□□□□ 0.52
SDHAP3-202ENST00000515467 MYH6P13533 1939 aa18.27■□□□□ 0.51
SDHAP3-202ENST00000515467 SYNRGQ9UMZ2 1314 aa18.26■□□□□ 0.51
SDHAP3-202ENST00000515467 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.26■□□□□ 0.51
SDHAP3-202ENST00000515467 SPDYE3A6NKU9 549 aa18.26■□□□□ 0.51
SDHAP3-202ENST00000515467 DYNC1LI2O43237 492 aaPredicted RBP18.26■□□□□ 0.51
SDHAP3-202ENST00000515467 ZEB2O60315 1214 aa18.26■□□□□ 0.51
SDHAP3-202ENST00000515467 C6orf222P0C671 652 aaPredicted RBP18.26■□□□□ 0.51
SDHAP3-202ENST00000515467 CST5P28325 142 aaPredicted RBP18.26■□□□□ 0.51
SDHAP3-202ENST00000515467 PKN1Q16512 942 aa18.26■□□□□ 0.51
SDHAP3-202ENST00000515467 GNASQ5JWF2 1037 aa18.26■□□□□ 0.51
SDHAP3-202ENST00000515467 FAM177A1Q8N128 213 aaPredicted RBP18.26■□□□□ 0.51
SDHAP3-202ENST00000515467 DPF3Q92784 378 aa18.26■□□□□ 0.51
SDHAP3-202ENST00000515467 LENG1Q96BZ8 264 aaPredicted RBP18.26■□□□□ 0.51
SDHAP3-202ENST00000515467 SENP6Q9GZR1 1112 aaPredicted RBP18.26■□□□□ 0.51
SDHAP3-202ENST00000515467 SH3GLB2Q9NR46 395 aa18.26■□□□□ 0.51
SDHAP3-202ENST00000515467 PHF24Q9UPV7 400 aa18.26■□□□□ 0.51
SDHAP3-202ENST00000515467 FRMPD4Q14CM0 1322 aa18.25■□□□□ 0.51
SDHAP3-202ENST00000515467 ESYT2A0FGR8 921 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms