RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 RMDN3Q96TC7 470 aa23.99■■□□□ 1.43
LSM6-207ENST00000515311 ANO3Q9BYT9 981 aa23.99■■□□□ 1.43
LSM6-207ENST00000515311 RPTORQ8N122 1335 aa23.99■■□□□ 1.43
LSM6-207ENST00000515311 MYH7BA7E2Y1 1941 aa23.98■■□□□ 1.43
LSM6-207ENST00000515311 CCDC194A0A1B0GVG4 234 aa23.98■■□□□ 1.43
LSM6-207ENST00000515311 COBLO75128 1261 aa23.98■■□□□ 1.43
LSM6-207ENST00000515311 ECM2O94769 699 aaPredicted RBP23.98■■□□□ 1.43
LSM6-207ENST00000515311 HOXD10P28358 340 aa23.98■■□□□ 1.43
LSM6-207ENST00000515311 RGS2P41220 211 aa23.98■■□□□ 1.43
LSM6-207ENST00000515311 CAP1Q01518 475 aa23.98■■□□□ 1.43
LSM6-207ENST00000515311 MCTP1Q6DN14 999 aa23.98■■□□□ 1.43
LSM6-207ENST00000515311 ZNF467Q7Z7K2 595 aaPredicted RBP23.98■■□□□ 1.43
LSM6-207ENST00000515311 DPP9Q86TI2 863 aa23.98■■□□□ 1.43
LSM6-207ENST00000515311 NSUN6Q8TEA1 469 aaKnown RBP23.98■■□□□ 1.43
LSM6-207ENST00000515311 TAAR1Q96RJ0 339 aa23.98■■□□□ 1.43
LSM6-207ENST00000515311 PXMP2Q9NR77 195 aa23.98■■□□□ 1.43
LSM6-207ENST00000515311 CIZ1Q9ULV3 898 aaPredicted RBP23.98■■□□□ 1.43
LSM6-207ENST00000515311 LRRC37A2A6NM11 1700 aa23.98■■□□□ 1.43
LSM6-207ENST00000515311 SOWAHBA6NEL2 793 aa23.97■■□□□ 1.43
LSM6-207ENST00000515311 KIF28PB7ZC32 967 aa23.97■■□□□ 1.43
LSM6-207ENST00000515311 ASTN1O14525 1302 aa23.97■■□□□ 1.43
LSM6-207ENST00000515311 FOXN1O15353 648 aa23.97■■□□□ 1.43
LSM6-207ENST00000515311 HSPA1AP0DMV8 641 aaKnown RBP23.97■■□□□ 1.43
LSM6-207ENST00000515311 HSPA1BP0DMV9 641 aaKnown RBP23.97■■□□□ 1.43
LSM6-207ENST00000515311 ZSCAN22P10073 491 aaPredicted RBP23.97■■□□□ 1.43
LSM6-207ENST00000515311 HSPA8P11142 646 aaKnown RBP23.97■■□□□ 1.43
LSM6-207ENST00000515311 SREBF1P36956 1147 aa23.97■■□□□ 1.43
LSM6-207ENST00000515311 BRAPQ7Z569 592 aa23.97■■□□□ 1.43
LSM6-207ENST00000515311 FGD4Q96M96 766 aa23.97■■□□□ 1.43
LSM6-207ENST00000515311 PURBQ96QR8 312 aaKnown RBP23.97■■□□□ 1.43
LSM6-207ENST00000515311 XRCC5P13010 732 aaKnown RBP23.96■■□□□ 1.43
LSM6-207ENST00000515311 CTCFP49711 727 aaPredicted RBP23.96■■□□□ 1.43
LSM6-207ENST00000515311 NUCB2P80303 420 aa23.96■■□□□ 1.43
LSM6-207ENST00000515311 PKP1Q13835 747 aa23.96■■□□□ 1.43
LSM6-207ENST00000515311 NONOQ15233 471 aaKnown RBP eCLIP23.96■■□□□ 1.43
LSM6-207ENST00000515311 ARHGEF16Q5VV41 709 aa23.96■■□□□ 1.43
LSM6-207ENST00000515311 IWS1Q96ST2 819 aa23.96■■□□□ 1.43
LSM6-207ENST00000515311 APBA2Q99767 749 aa23.96■■□□□ 1.43
LSM6-207ENST00000515311 MYH15Q9Y2K3 1946 aa23.95■■□□□ 1.42
LSM6-207ENST00000515311 B4DLN1 442 aa23.95■■□□□ 1.42
LSM6-207ENST00000515311 BRD1O95696 1058 aa23.95■■□□□ 1.42
LSM6-207ENST00000515311 ALDH5A1P51649 535 aaPredicted RBP23.95■■□□□ 1.42
LSM6-207ENST00000515311 PRMT2P55345 433 aa23.95■■□□□ 1.42
LSM6-207ENST00000515311 RESTQ13127 1097 aa23.95■■□□□ 1.42
LSM6-207ENST00000515311 PIK3AP1Q6ZUJ8 805 aa23.95■■□□□ 1.42
LSM6-207ENST00000515311 MSL3Q8N5Y2 521 aaKnown RBP23.95■■□□□ 1.42
LSM6-207ENST00000515311 CRYGNQ8WXF5 182 aa23.95■■□□□ 1.42
LSM6-207ENST00000515311 PGBD1Q96JS3 809 aa23.95■■□□□ 1.42
LSM6-207ENST00000515311 MPHOSPH6Q99547 160 aaKnown RBP23.95■■□□□ 1.42
LSM6-207ENST00000515311 PDCD2LQ9BRP1 358 aa23.95■■□□□ 1.42
LSM6-207ENST00000515311 ZSCAN16Q9H4T2 348 aaPredicted RBP23.95■■□□□ 1.42
LSM6-207ENST00000515311 SRRDQ9UH36 339 aa23.95■■□□□ 1.42
LSM6-207ENST00000515311 EIF2AK2P19525 551 aaKnown RBP23.94■■□□□ 1.42
LSM6-207ENST00000515311 EDNRBP24530 442 aa23.94■■□□□ 1.42
LSM6-207ENST00000515311 FLT3LGP49771 235 aa23.94■■□□□ 1.42
LSM6-207ENST00000515311 PRKCZQ05513 592 aa23.94■■□□□ 1.42
LSM6-207ENST00000515311 EARS2Q5JPH6 523 aaKnown RBP23.94■■□□□ 1.42
LSM6-207ENST00000515311 XRRA1Q6P2D8 792 aa23.94■■□□□ 1.42
LSM6-207ENST00000515311 FERMT3Q86UX7 667 aa23.94■■□□□ 1.42
LSM6-207ENST00000515311 MORC4Q8TE76 937 aa23.94■■□□□ 1.42
LSM6-207ENST00000515311 MAML3Q96JK9 1138 aa23.94■■□□□ 1.42
LSM6-207ENST00000515311 ASB14A6NK59 587 aa23.93■■□□□ 1.42
LSM6-207ENST00000515311 ARHGAP4P98171 946 aa23.93■■□□□ 1.42
LSM6-207ENST00000515311 IRF5Q13568 498 aa23.93■■□□□ 1.42
LSM6-207ENST00000515311 PGM5Q15124 567 aa23.93■■□□□ 1.42
LSM6-207ENST00000515311 PCNX4Q63HM2 1172 aa23.93■■□□□ 1.42
LSM6-207ENST00000515311 MAMDC4Q6UXC1 1216 aa23.93■■□□□ 1.42
LSM6-207ENST00000515311 NPLOC4Q8TAT6 608 aa23.93■■□□□ 1.42
LSM6-207ENST00000515311 TBCKQ8TEA7 893 aa23.93■■□□□ 1.42
LSM6-207ENST00000515311 GABRQQ9UN88 632 aa23.93■■□□□ 1.42
LSM6-207ENST00000515311 MCM3APO60318 1980 aa23.92■■□□□ 1.42
LSM6-207ENST00000515311 FAM205CA6NFA0 338 aa23.92■■□□□ 1.42
LSM6-207ENST00000515311 F13A1P00488 732 aa23.92■■□□□ 1.42
LSM6-207ENST00000515311 CYP3A4P08684 503 aa23.92■■□□□ 1.42
LSM6-207ENST00000515311 TRAPPC10P48553 1259 aa23.92■■□□□ 1.42
LSM6-207ENST00000515311 USP11P51784 963 aa23.92■■□□□ 1.42
LSM6-207ENST00000515311 INF2Q27J81 1249 aa23.92■■□□□ 1.42
LSM6-207ENST00000515311 OLFML2BQ68BL8 750 aa23.92■■□□□ 1.42
LSM6-207ENST00000515311 ZDHHC9Q9Y397 364 aa23.92■■□□□ 1.42
LSM6-207ENST00000515311 SYNGAP1Q96PV0 1343 aa23.91■■□□□ 1.42
LSM6-207ENST00000515311 STAM2O75886 525 aa23.91■■□□□ 1.42
LSM6-207ENST00000515311 NR3C2P08235 984 aa23.91■■□□□ 1.42
LSM6-207ENST00000515311 CYP2B6P20813 491 aa23.91■■□□□ 1.42
LSM6-207ENST00000515311 CCND2P30279 289 aa23.91■■□□□ 1.42
LSM6-207ENST00000515311 OTOP1Q7RTM1 612 aa23.91■■□□□ 1.42
LSM6-207ENST00000515311 NEK8Q86SG6 692 aa23.91■■□□□ 1.42
LSM6-207ENST00000515311 VSIG10LQ86VR7 867 aa23.91■■□□□ 1.42
LSM6-207ENST00000515311 TRMT44Q8IYL2 757 aaKnown RBP23.91■■□□□ 1.42
LSM6-207ENST00000515311 IL31RAQ8NI17 732 aa23.91■■□□□ 1.42
LSM6-207ENST00000515311 CHMP5Q9NZZ3 219 aa23.91■■□□□ 1.42
LSM6-207ENST00000515311 NOL7Q9UMY1 257 aaKnown RBP23.91■■□□□ 1.42
LSM6-207ENST00000515311 IGHA2P01877 340 aa23.9■■□□□ 1.42
LSM6-207ENST00000515311 UBXN2AP68543 259 aa23.9■■□□□ 1.42
LSM6-207ENST00000515311 RILPL1Q5EBL4 403 aa23.9■■□□□ 1.42
LSM6-207ENST00000515311 NAP1L4Q99733 375 aaKnown RBP23.9■■□□□ 1.42
LSM6-207ENST00000515311 TINF2Q9BSI4 451 aa23.9■■□□□ 1.42
LSM6-207ENST00000515311 KIAA1217Q5T5P2 1943 aa23.9■■□□□ 1.42
LSM6-207ENST00000515311 CIITAP33076 1130 aa23.89■■□□□ 1.41
LSM6-207ENST00000515311 LBX1P52954 281 aa23.89■■□□□ 1.41
LSM6-207ENST00000515311 PDE4DQ08499 809 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms