RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 NAPAP54920 295 aa16.07■□□□□ 0.16
USP46-209ENST00000514536 PFKFB3Q16875 520 aaPredicted RBP16.07■□□□□ 0.16
USP46-209ENST00000514536 TAPT1Q6NXT6 567 aa16.07■□□□□ 0.16
USP46-209ENST00000514536 USP17L6PQ6QN14 398 aa16.07■□□□□ 0.16
USP46-209ENST00000514536 SMARCC2Q8TAQ2 1214 aa16.07■□□□□ 0.16
USP46-209ENST00000514536 CUL5Q93034 780 aa16.07■□□□□ 0.16
USP46-209ENST00000514536 LENG1Q96BZ8 264 aaPredicted RBP16.07■□□□□ 0.16
USP46-209ENST00000514536 VTA1Q9NP79 307 aa16.07■□□□□ 0.16
USP46-209ENST00000514536 PXMP2Q9NR77 195 aa16.07■□□□□ 0.16
USP46-209ENST00000514536 MYH6P13533 1939 aa16.06■□□□□ 0.16
USP46-209ENST00000514536 STXBP3O00186 592 aa16.06■□□□□ 0.16
USP46-209ENST00000514536 MEIS2O14770 477 aa16.06■□□□□ 0.16
USP46-209ENST00000514536 PFKFB2O60825 505 aa16.06■□□□□ 0.16
USP46-209ENST00000514536 MYCNP04198 464 aaPredicted RBP16.06■□□□□ 0.16
USP46-209ENST00000514536 SCG2P13521 617 aa16.06■□□□□ 0.16
USP46-209ENST00000514536 ADCYAP1R1P41586 468 aa16.06■□□□□ 0.16
USP46-209ENST00000514536 SSRP1Q08945 709 aaKnown RBP16.06■□□□□ 0.16
USP46-209ENST00000514536 SCRN1Q12765 414 aa16.06■□□□□ 0.16
USP46-209ENST00000514536 PKN1Q16512 942 aa16.06■□□□□ 0.16
USP46-209ENST00000514536 TYW1BQ6NUM6 668 aa16.06■□□□□ 0.16
USP46-209ENST00000514536 DIS3LQ8TF46 1054 aaKnown RBP16.06■□□□□ 0.16
USP46-209ENST00000514536 IWS1Q96ST2 819 aa16.06■□□□□ 0.16
USP46-209ENST00000514536 BACH2Q9BYV9 841 aa16.06■□□□□ 0.16
USP46-209ENST00000514536 BARHL2Q9NY43 387 aa16.06■□□□□ 0.16
USP46-209ENST00000514536 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.05■□□□□ 0.16
USP46-209ENST00000514536 PIK3CDO00329 1044 aa16.05■□□□□ 0.16
USP46-209ENST00000514536 ADCY6O43306 1168 aa16.05■□□□□ 0.16
USP46-209ENST00000514536 PGK1P00558 417 aa16.05■□□□□ 0.16
USP46-209ENST00000514536 NR3C2P08235 984 aa16.05■□□□□ 0.16
USP46-209ENST00000514536 MNX1P50219 401 aaPredicted RBP16.05■□□□□ 0.16
USP46-209ENST00000514536 TNFAIP2Q03169 654 aa16.05■□□□□ 0.16
USP46-209ENST00000514536 STXBP2Q15833 593 aa16.05■□□□□ 0.16
USP46-209ENST00000514536 GJC2Q5T442 439 aaPredicted RBP16.05■□□□□ 0.16
USP46-209ENST00000514536 IQSEC1Q6DN90 963 aa16.05■□□□□ 0.16
USP46-209ENST00000514536 CPLX2Q6PUV4 134 aaKnown RBP16.05■□□□□ 0.16
USP46-209ENST00000514536 ANKLE1Q8NAG6 615 aa16.05■□□□□ 0.16
USP46-209ENST00000514536 PAWRQ96IZ0 340 aaKnown RBP16.05■□□□□ 0.16
USP46-209ENST00000514536 RNF26Q9BY78 433 aaPredicted RBP16.05■□□□□ 0.16
USP46-209ENST00000514536 XPNPEP3Q9NQH7 507 aa16.05■□□□□ 0.16
USP46-209ENST00000514536 RBM27Q9P2N5 1060 aaKnown RBP16.05■□□□□ 0.16
USP46-209ENST00000514536 RBBP6Q7Z6E9 1792 aaKnown RBP16.05■□□□□ 0.16
USP46-209ENST00000514536 SMCO2A6NFE2 343 aa16.04■□□□□ 0.16
USP46-209ENST00000514536 hCG_1984214I3L0E3 225 aa16.04■□□□□ 0.16
USP46-209ENST00000514536 LARGE1O95461 756 aa16.04■□□□□ 0.16
USP46-209ENST00000514536 MYCLP12524 364 aaPredicted RBP16.04■□□□□ 0.16
USP46-209ENST00000514536 UBE2SQ16763 222 aa16.04■□□□□ 0.16
USP46-209ENST00000514536 ME3Q16798 604 aa16.04■□□□□ 0.16
USP46-209ENST00000514536 UBE2Q1Q7Z7E8 422 aa16.04■□□□□ 0.16
USP46-209ENST00000514536 TRIM22Q8IYM9 498 aa16.04■□□□□ 0.16
USP46-209ENST00000514536 ZNF713Q8N859 430 aaPredicted RBP16.04■□□□□ 0.16
USP46-209ENST00000514536 NECAB1Q8N987 351 aa16.04■□□□□ 0.16
USP46-209ENST00000514536 ARRDC4Q8NCT1 418 aa16.04■□□□□ 0.16
USP46-209ENST00000514536 PDCD2LQ9BRP1 358 aa16.04■□□□□ 0.16
USP46-209ENST00000514536 LCTP09848 1927 aa16.04■□□□□ 0.16
USP46-209ENST00000514536 DTNBO60941 627 aa16.04■□□□□ 0.16
USP46-209ENST00000514536 DUSP11O75319 330 aaKnown RBP16.04■□□□□ 0.16
USP46-209ENST00000514536 SMPD1P17405 629 aa16.04■□□□□ 0.16
USP46-209ENST00000514536 PGM5Q15124 567 aa16.04■□□□□ 0.16
USP46-209ENST00000514536 LRRC41Q15345 812 aa16.04■□□□□ 0.16
USP46-209ENST00000514536 TMEM63BQ5T3F8 832 aa16.04■□□□□ 0.16
USP46-209ENST00000514536 NECAB2Q7Z6G3 386 aa16.04■□□□□ 0.16
USP46-209ENST00000514536 ZFP91Q96JP5 570 aaPredicted RBP16.04■□□□□ 0.16
USP46-209ENST00000514536 TBC1D32Q96NH3 1257 aa16.04■□□□□ 0.16
USP46-209ENST00000514536 WDR11Q9BZH6 1224 aa16.04■□□□□ 0.16
USP46-209ENST00000514536 RIC8AQ9NPQ8 531 aa16.04■□□□□ 0.16
USP46-209ENST00000514536 EIF3JO75822 258 aaKnown RBP16.03■□□□□ 0.16
USP46-209ENST00000514536 PTGS1P23219 599 aa16.03■□□□□ 0.16
USP46-209ENST00000514536 ADCY7P51828 1080 aa16.03■□□□□ 0.16
USP46-209ENST00000514536 RABEP1Q15276 862 aa16.03■□□□□ 0.16
USP46-209ENST00000514536 PPP1R18Q6NYC8 613 aa16.03■□□□□ 0.16
USP46-209ENST00000514536 SEPT14Q6ZU15 432 aa16.03■□□□□ 0.16
USP46-209ENST00000514536 VSIG10LQ86VR7 867 aa16.03■□□□□ 0.16
USP46-209ENST00000514536 IL31RAQ8NI17 732 aa16.03■□□□□ 0.16
USP46-209ENST00000514536 LIMCH1Q9UPQ0 1083 aa16.03■□□□□ 0.16
USP46-209ENST00000514536 MCM3APO60318 1980 aa16.02■□□□□ 0.16
USP46-209ENST00000514536 RBM47A0AV96 593 aaKnown RBP16.02■□□□□ 0.16
USP46-209ENST00000514536 DYNC1LI2O43237 492 aaPredicted RBP16.02■□□□□ 0.16
USP46-209ENST00000514536 CDKL5O76039 1030 aa16.02■□□□□ 0.16
USP46-209ENST00000514536 IRX5P78411 483 aaPredicted RBP16.02■□□□□ 0.16
USP46-209ENST00000514536 RNF180Q86T96 592 aa16.02■□□□□ 0.16
USP46-209ENST00000514536 C11orf49Q9H6J7 331 aa16.02■□□□□ 0.16
USP46-209ENST00000514536 GNEQ9Y223 722 aaKnown RBP16.02■□□□□ 0.16
USP46-209ENST00000514536 KBTBD13C9JR72 458 aa16.01■□□□□ 0.15
USP46-209ENST00000514536 DNM1LO00429 736 aa16.01■□□□□ 0.15
USP46-209ENST00000514536 ADAMTS4O75173 837 aa16.01■□□□□ 0.15
USP46-209ENST00000514536 CTDNEP1O95476 244 aa16.01■□□□□ 0.15
USP46-209ENST00000514536 CCND2P30279 289 aa16.01■□□□□ 0.15
USP46-209ENST00000514536 DUSP28Q4G0W2 176 aa16.01■□□□□ 0.15
USP46-209ENST00000514536 SCFD2Q8WU76 684 aa16.01■□□□□ 0.15
USP46-209ENST00000514536 GTF3C6Q969F1 213 aa16.01■□□□□ 0.15
USP46-209ENST00000514536 SPC25Q9HBM1 224 aa16.01■□□□□ 0.15
USP46-209ENST00000514536 VPS54Q9P1Q0 977 aa16.01■□□□□ 0.15
USP46-209ENST00000514536 PCDHA6Q9UN73 950 aa16.01■□□□□ 0.15
USP46-209ENST00000514536 PCDHA8Q9Y5H6 950 aa16.01■□□□□ 0.15
USP46-209ENST00000514536 SYNRGQ9UMZ2 1314 aa16.01■□□□□ 0.15
USP46-209ENST00000514536 MYADML2A6NDP7 307 aa16■□□□□ 0.15
USP46-209ENST00000514536 SPDYE3A6NKU9 549 aa16■□□□□ 0.15
USP46-209ENST00000514536 DEXIO95424 95 aa16■□□□□ 0.15
USP46-209ENST00000514536 C6orf222P0C671 652 aaPredicted RBP16■□□□□ 0.15
USP46-209ENST00000514536 TXNP10599 105 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms