RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.97□□□□□ -1.77
CHD1-211ENST00000514344 CNOT1A5YKK6 2376 aaKnown RBP3.97□□□□□ -1.77
CHD1-211ENST00000514344 ATG2AQ2TAZ0 1938 aa3.97□□□□□ -1.77
CHD1-211ENST00000514344 GRM6O15303 877 aa3.96□□□□□ -1.77
CHD1-211ENST00000514344 NBNO60934 754 aa3.96□□□□□ -1.77
CHD1-211ENST00000514344 BRD1O95696 1058 aa3.96□□□□□ -1.77
CHD1-211ENST00000514344 NUBP1P53384 320 aa3.96□□□□□ -1.77
CHD1-211ENST00000514344 RBM10P98175 930 aaKnown RBP3.96□□□□□ -1.77
CHD1-211ENST00000514344 PURAQ00577 322 aaKnown RBP3.96□□□□□ -1.77
CHD1-211ENST00000514344 ICA1Q05084 483 aa3.96□□□□□ -1.77
CHD1-211ENST00000514344 EXOSC9Q06265 439 aaKnown RBP3.96□□□□□ -1.77
CHD1-211ENST00000514344 MVPQ14764 893 aaKnown RBP3.96□□□□□ -1.77
CHD1-211ENST00000514344 FAM83BQ5T0W9 1011 aa3.96□□□□□ -1.77
CHD1-211ENST00000514344 CNKSR3Q6P9H4 555 aa3.96□□□□□ -1.77
CHD1-211ENST00000514344 FAM133AQ8N9E0 248 aa3.96□□□□□ -1.77
CHD1-211ENST00000514344 NUP88Q99567 741 aaPredicted RBP3.96□□□□□ -1.77
CHD1-211ENST00000514344 PHF7Q9BWX1 381 aaPredicted RBP3.96□□□□□ -1.77
CHD1-211ENST00000514344 VCPKMTQ9H867 229 aa3.96□□□□□ -1.77
CHD1-211ENST00000514344 FOCADQ5VW36 1801 aa3.96□□□□□ -1.77
CHD1-211ENST00000514344 PDS5AQ29RF7 1337 aaKnown RBP3.96□□□□□ -1.77
CHD1-211ENST00000514344 IGF2RP11717 2491 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 NLRC5Q86WI3 1866 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 ABHD14A-ACY1A0A1B0GW23 586 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 WDR46O15213 610 aaKnown RBP3.96□□□□□ -1.78
CHD1-211ENST00000514344 NCK2O43639 380 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 PI15O43692 258 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 CTNNB1P35222 781 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 IL15P40933 162 aaPredicted RBP3.96□□□□□ -1.78
CHD1-211ENST00000514344 DMWDQ09019 674 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 PTGISQ16647 500 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 KIAA0319Q5VV43 1072 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 KIAA1211Q6ZU35 1233 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 LRRC8DQ7L1W4 858 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 ZNF467Q7Z7K2 595 aaPredicted RBP3.96□□□□□ -1.78
CHD1-211ENST00000514344 TTC6Q86TZ1 520 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 KREMEN2Q8NCW0 462 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 MSLNLQ96KJ4 702 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 APOL5Q9BWW9 433 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 USP44Q9H0E7 712 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 ARHGEF10LQ9HCE6 1279 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 RAVER2Q9HCJ3 691 aaKnown RBP3.96□□□□□ -1.78
CHD1-211ENST00000514344 CLEC1BQ9P126 229 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 PPP1R9AQ9ULJ8 1098 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 ADAMTS5Q9UNA0 930 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 SALL2Q9Y467 1007 aaPredicted RBP3.96□□□□□ -1.78
CHD1-211ENST00000514344 FANCIQ9NVI1 1328 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 MICAL3Q7RTP6 2002 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 EYA4O95677 639 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 POLR3DP05423 398 aaPredicted RBP3.96□□□□□ -1.78
CHD1-211ENST00000514344 ATXN1P54253 815 aaKnown RBP3.96□□□□□ -1.78
CHD1-211ENST00000514344 PPP4CP60510 307 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 TFCP2Q12800 502 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 CBX2Q14781 532 aaPredicted RBP3.96□□□□□ -1.78
CHD1-211ENST00000514344 LRRFIP1Q32MZ4 808 aaKnown RBP3.96□□□□□ -1.78
CHD1-211ENST00000514344 SIAH1Q8IUQ4 282 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 REPS2Q8NFH8 660 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 RIN2Q8WYP3 895 aaPredicted RBP3.96□□□□□ -1.78
CHD1-211ENST00000514344 RUBCNQ92622 972 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 SEZ6LQ9BYH1 1024 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 TMX2Q9Y320 296 aa3.96□□□□□ -1.78
CHD1-211ENST00000514344 MYO5AQ9Y4I1 1855 aaKnown RBP3.95□□□□□ -1.78
CHD1-211ENST00000514344 FAM205CA6NFA0 338 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 CIAO1O76071 339 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 ADRB1P08588 477 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 SELPP16109 830 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 NKX3-2P78367 333 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 ADAM15Q13444 863 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 MTMR3Q13615 1198 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 ADGRD2Q7Z7M1 963 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 MAGEB6Q8N7X4 407 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 AFAP1L1Q8TED9 768 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 HAUS7Q99871 368 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 EHD4Q9H223 541 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 CDH22Q9UJ99 828 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 COG6Q9Y2V7 657 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 CTDP1Q9Y5B0 961 aaPredicted RBP3.95□□□□□ -1.78
CHD1-211ENST00000514344 HELZ2Q9BYK8 2649 aaKnown RBP3.95□□□□□ -1.78
CHD1-211ENST00000514344 AMHP03971 560 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 ASGR2P07307 311 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 CKBP12277 381 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 CYP7A1P22680 504 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 COPB2P35606 906 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 NRIP1P48552 1158 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 HTRA4P83105 476 aaPredicted RBP3.95□□□□□ -1.78
CHD1-211ENST00000514344 TMEM179Q6ZVK1 233 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 WWC1Q8IX03 1113 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 DBF4BQ8NFT6 615 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 KIFC2Q96AC6 838 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 CHMP4CQ96CF2 233 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 PURBQ96QR8 312 aaKnown RBP3.95□□□□□ -1.78
CHD1-211ENST00000514344 MTG1Q9BT17 334 aaPredicted RBP3.95□□□□□ -1.78
CHD1-211ENST00000514344 IFIH1Q9BYX4 1025 aaKnown RBP3.95□□□□□ -1.78
CHD1-211ENST00000514344 SH2D4AQ9H788 454 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 POLR3EQ9NVU0 708 aa3.95□□□□□ -1.78
CHD1-211ENST00000514344 CDV3Q9UKY7 258 aaKnown RBP3.95□□□□□ -1.78
CHD1-211ENST00000514344 PER2O15055 1255 aa3.94□□□□□ -1.78
CHD1-211ENST00000514344 LGR5O75473 907 aa3.94□□□□□ -1.78
CHD1-211ENST00000514344 IDH1O75874 414 aaKnown RBP3.94□□□□□ -1.78
CHD1-211ENST00000514344 GLP2RO95838 553 aa3.94□□□□□ -1.78
CHD1-211ENST00000514344 EEF2P13639 858 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms