RNA–Protein interactions for RNA: ENST00000514030.1

SNX2-212, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 823 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-212ENST00000514030 SMAD4Q13485 552 aaKnown RBP6.65□□□□□ -1.34
SNX2-212ENST00000514030 GNPTABQ3T906 1256 aa6.65□□□□□ -1.34
SNX2-212ENST00000514030 DDX11Q96FC9 970 aa6.65□□□□□ -1.34
SNX2-212ENST00000514030 KRTAP9-8Q9BYQ0 159 aa6.65□□□□□ -1.34
SNX2-212ENST00000514030 AP5M1Q9H0R1 490 aa6.65□□□□□ -1.34
SNX2-212ENST00000514030 PHAXQ9H814 394 aaKnown RBP6.65□□□□□ -1.34
SNX2-212ENST00000514030 SPATA6Q9NWH7 488 aaPredicted RBP6.65□□□□□ -1.34
SNX2-212ENST00000514030 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.65□□□□□ -1.34
SNX2-212ENST00000514030 C2orf71A6NGG8 1288 aa6.64□□□□□ -1.35
SNX2-212ENST00000514030 MATN3O15232 486 aa6.64□□□□□ -1.35
SNX2-212ENST00000514030 VAMP1P23763 118 aa6.64□□□□□ -1.35
SNX2-212ENST00000514030 GRB10Q13322 594 aa6.64□□□□□ -1.35
SNX2-212ENST00000514030 DPY19L1Q2PZI1 675 aa6.64□□□□□ -1.35
SNX2-212ENST00000514030 RGL3Q3MIN7 710 aa6.64□□□□□ -1.35
SNX2-212ENST00000514030 ETV3LQ6ZN32 361 aa6.64□□□□□ -1.35
SNX2-212ENST00000514030 RUFY4Q6ZNE9 571 aa6.64□□□□□ -1.35
SNX2-212ENST00000514030 ZC3H18Q86VM9 953 aaKnown RBP6.64□□□□□ -1.35
SNX2-212ENST00000514030 LINC00482Q8N8I6 264 aa6.64□□□□□ -1.35
SNX2-212ENST00000514030 C8orf49Q96NF6 230 aa6.64□□□□□ -1.35
SNX2-212ENST00000514030 RBM15Q96T37 977 aaKnown RBP eCLIP6.64□□□□□ -1.35
SNX2-212ENST00000514030 SUGT1Q9Y2Z0 365 aa6.64□□□□□ -1.35
SNX2-212ENST00000514030 C1QTNF3-AMACRE9PGA6 284 aa6.63□□□□□ -1.35
SNX2-212ENST00000514030 ZNF536O15090 1300 aa6.63□□□□□ -1.35
SNX2-212ENST00000514030 AKAP8O43823 692 aaKnown RBP6.63□□□□□ -1.35
SNX2-212ENST00000514030 RPL13P26373 211 aaKnown RBP6.63□□□□□ -1.35
SNX2-212ENST00000514030 COL9A2Q14055 689 aaPredicted RBP6.63□□□□□ -1.35
SNX2-212ENST00000514030 FAM26FQ5R3K3 315 aa6.63□□□□□ -1.35
SNX2-212ENST00000514030 CPNE8Q86YQ8 564 aa6.63□□□□□ -1.35
SNX2-212ENST00000514030 MTA3Q9BTC8 594 aa6.63□□□□□ -1.35
SNX2-212ENST00000514030 MCMBPQ9BTE3 642 aa6.63□□□□□ -1.35
SNX2-212ENST00000514030 C1QTNF3Q9BXJ4 246 aa6.63□□□□□ -1.35
SNX2-212ENST00000514030 KLHL25Q9H0H3 589 aa6.63□□□□□ -1.35
SNX2-212ENST00000514030 FBLN5Q9UBX5 448 aa6.63□□□□□ -1.35
SNX2-212ENST00000514030 CGGBP1Q9UFW8 167 aaPredicted RBP6.63□□□□□ -1.35
SNX2-212ENST00000514030 VAMP4O75379 141 aa6.62□□□□□ -1.35
SNX2-212ENST00000514030 TCF3P15923 654 aa6.62□□□□□ -1.35
SNX2-212ENST00000514030 ZNF20P17024 532 aa6.62□□□□□ -1.35
SNX2-212ENST00000514030 THBS2P35442 1172 aa6.62□□□□□ -1.35
SNX2-212ENST00000514030 SLC7A5Q01650 507 aa6.62□□□□□ -1.35
SNX2-212ENST00000514030 GLB1LQ6UWU2 654 aa6.62□□□□□ -1.35
SNX2-212ENST00000514030 KYQ8NBH2 561 aa6.62□□□□□ -1.35
SNX2-212ENST00000514030 MROH6A6NGR9 719 aa6.61□□□□□ -1.35
SNX2-212ENST00000514030 FUCA1P04066 466 aa6.61□□□□□ -1.35
SNX2-212ENST00000514030 NTRK1P04629 796 aa6.61□□□□□ -1.35
SNX2-212ENST00000514030 C8BP07358 591 aa6.61□□□□□ -1.35
SNX2-212ENST00000514030 TBC1D10BQ4KMP7 808 aaPredicted RBP6.61□□□□□ -1.35
SNX2-212ENST00000514030 CRACR2BQ8N4Y2 399 aaPredicted RBP6.61□□□□□ -1.35
SNX2-212ENST00000514030 TTLL6Q8N841 843 aa6.61□□□□□ -1.35
SNX2-212ENST00000514030 DVL3Q92997 716 aaPredicted RBP6.61□□□□□ -1.35
SNX2-212ENST00000514030 GORASP1Q9BQQ3 440 aa6.61□□□□□ -1.35
SNX2-212ENST00000514030 C11orf84Q9BUA3 381 aaPredicted RBP6.61□□□□□ -1.35
SNX2-212ENST00000514030 METTL5Q9NRN9 209 aaKnown RBP6.61□□□□□ -1.35
SNX2-212ENST00000514030 LTBP3Q9NS15 1303 aa6.6□□□□□ -1.35
SNX2-212ENST00000514030 EPHX1P07099 455 aa6.6□□□□□ -1.35
SNX2-212ENST00000514030 SURF1Q15526 300 aa6.6□□□□□ -1.35
SNX2-212ENST00000514030 CCDC81Q6ZN84 652 aa6.6□□□□□ -1.35
SNX2-212ENST00000514030 PLEKHH3Q7Z736 793 aa6.6□□□□□ -1.35
SNX2-212ENST00000514030 OR6P1Q8NGX9 317 aa6.6□□□□□ -1.35
SNX2-212ENST00000514030 SPATA32Q96LK8 384 aa6.6□□□□□ -1.35
SNX2-212ENST00000514030 FGD4Q96M96 766 aa6.6□□□□□ -1.35
SNX2-212ENST00000514030 INVSQ9Y283 1065 aa6.6□□□□□ -1.35
SNX2-212ENST00000514030 PCDHGB7Q9Y5F8 929 aa6.6□□□□□ -1.35
SNX2-212ENST00000514030 C7orf72A4D263 438 aa6.59□□□□□ -1.35
SNX2-212ENST00000514030 SUV39H1O43463 412 aa6.59□□□□□ -1.35
SNX2-212ENST00000514030 FSHBP01225 129 aa6.59□□□□□ -1.35
SNX2-212ENST00000514030 ZNF394Q53GI3 561 aa6.59□□□□□ -1.35
SNX2-212ENST00000514030 CD300LDQ6UXZ3 194 aa6.59□□□□□ -1.35
SNX2-212ENST00000514030 ARHGEF39Q8N4T4 335 aa6.59□□□□□ -1.35
SNX2-212ENST00000514030 C19orf47Q8N9M1 422 aaKnown RBP6.59□□□□□ -1.35
SNX2-212ENST00000514030 SLC16A11Q8NCK7 471 aa6.59□□□□□ -1.35
SNX2-212ENST00000514030 KISS1RQ969F8 398 aaPredicted RBP6.59□□□□□ -1.35
SNX2-212ENST00000514030 RCC1LQ96I51 464 aaKnown RBP6.59□□□□□ -1.35
SNX2-212ENST00000514030 KRTAP3-1Q9BYR8 98 aa6.59□□□□□ -1.35
SNX2-212ENST00000514030 NGRNQ9NPE2 291 aaKnown RBP6.59□□□□□ -1.35
SNX2-212ENST00000514030 MARCH2Q9P0N8 246 aa6.59□□□□□ -1.35
SNX2-212ENST00000514030 SIT1Q9Y3P8 196 aa6.59□□□□□ -1.35
SNX2-212ENST00000514030 RECKO95980 971 aa6.58□□□□□ -1.36
SNX2-212ENST00000514030 GDF5P43026 501 aa6.58□□□□□ -1.36
SNX2-212ENST00000514030 EIF6P56537 245 aaKnown RBP6.58□□□□□ -1.36
SNX2-212ENST00000514030 MIB1Q86YT6 1006 aa6.58□□□□□ -1.36
SNX2-212ENST00000514030 SEC14L1Q92503 715 aa6.58□□□□□ -1.36
SNX2-212ENST00000514030 IGSF5Q9NSI5 407 aa6.58□□□□□ -1.36
SNX2-212ENST00000514030 PPP1R11O60927 126 aaPredicted RBP6.57□□□□□ -1.36
SNX2-212ENST00000514030 NAT2P11245 290 aa6.57□□□□□ -1.36
SNX2-212ENST00000514030 FANCCQ00597 558 aa6.57□□□□□ -1.36
SNX2-212ENST00000514030 MCTP2Q6DN12 878 aa6.57□□□□□ -1.36
SNX2-212ENST00000514030 POMZP3Q6PJE2 187 aa6.57□□□□□ -1.36
SNX2-212ENST00000514030 LCORQ96JN0 433 aaPredicted RBP6.57□□□□□ -1.36
SNX2-212ENST00000514030 MMP19Q99542 508 aa6.57□□□□□ -1.36
SNX2-212ENST00000514030 YIPF4Q9BSR8 244 aa6.57□□□□□ -1.36
SNX2-212ENST00000514030 CLEC1BQ9P126 229 aa6.57□□□□□ -1.36
SNX2-212ENST00000514030 PCDHB10Q9UN67 800 aa6.57□□□□□ -1.36
SNX2-212ENST00000514030 C9orf118A6NHY6 69 aa6.56□□□□□ -1.36
SNX2-212ENST00000514030 C6P13671 934 aa6.56□□□□□ -1.36
SNX2-212ENST00000514030 C9orf131Q5VYM1 1079 aa6.56□□□□□ -1.36
SNX2-212ENST00000514030 CDK5RAP1Q96SZ6 601 aaKnown RBP6.56□□□□□ -1.36
SNX2-212ENST00000514030 BTG4Q9NY30 223 aa6.56□□□□□ -1.36
SNX2-212ENST00000514030 AKT3Q9Y243 479 aa6.56□□□□□ -1.36
SNX2-212ENST00000514030 ANKRD34BA5PLL1 514 aa6.55□□□□□ -1.36
SNX2-212ENST00000514030 SCAMP3O14828 347 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms