RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 ADCY7P51828 1080 aa11.27□□□□□ -0.61
TOPBP1-209ENST00000513818 GUCY1B3Q02153 619 aa11.27□□□□□ -0.61
TOPBP1-209ENST00000513818 PRAMEF19Q5SWL8 479 aa11.27□□□□□ -0.61
TOPBP1-209ENST00000513818 PPP1R18Q6NYC8 613 aa11.27□□□□□ -0.61
TOPBP1-209ENST00000513818 SLAIN1Q8ND83 568 aa11.27□□□□□ -0.61
TOPBP1-209ENST00000513818 SMARCC2Q8TAQ2 1214 aa11.27□□□□□ -0.61
TOPBP1-209ENST00000513818 SP7Q8TDD2 431 aaPredicted RBP11.27□□□□□ -0.61
TOPBP1-209ENST00000513818 ALG1Q9BT22 464 aa11.27□□□□□ -0.61
TOPBP1-209ENST00000513818 RBM27Q9P2N5 1060 aaKnown RBP11.27□□□□□ -0.61
TOPBP1-209ENST00000513818 C19orf67A6NJJ6 358 aa11.26□□□□□ -0.61
TOPBP1-209ENST00000513818 K7ELQ4 463 aaPredicted RBP11.26□□□□□ -0.61
TOPBP1-209ENST00000513818 HMGCRP04035 888 aa11.26□□□□□ -0.61
TOPBP1-209ENST00000513818 PTGS1P23219 599 aa11.26□□□□□ -0.61
TOPBP1-209ENST00000513818 NLRP5P59047 1200 aa11.26□□□□□ -0.61
TOPBP1-209ENST00000513818 MTFR1Q15390 333 aa11.26□□□□□ -0.61
TOPBP1-209ENST00000513818 JAKMIP3Q5VZ66 844 aa11.26□□□□□ -0.61
TOPBP1-209ENST00000513818 ANO1Q5XXA6 986 aa11.26□□□□□ -0.61
TOPBP1-209ENST00000513818 ARMCX2Q7L311 632 aa11.26□□□□□ -0.61
TOPBP1-209ENST00000513818 EEPD1Q7L9B9 569 aa11.26□□□□□ -0.61
TOPBP1-209ENST00000513818 HSCBQ8IWL3 235 aa11.26□□□□□ -0.61
TOPBP1-209ENST00000513818 FBXO16Q8IX29 292 aaPredicted RBP11.26□□□□□ -0.61
TOPBP1-209ENST00000513818 TRPV1Q8NER1 839 aa11.26□□□□□ -0.61
TOPBP1-209ENST00000513818 CUL5Q93034 780 aa11.26□□□□□ -0.61
TOPBP1-209ENST00000513818 LENG1Q96BZ8 264 aaPredicted RBP11.26□□□□□ -0.61
TOPBP1-209ENST00000513818 PSTPIP2Q9H939 334 aa11.26□□□□□ -0.61
TOPBP1-209ENST00000513818 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.26□□□□□ -0.61
TOPBP1-209ENST00000513818 ZHX1Q9UKY1 873 aaPredicted RBP11.26□□□□□ -0.61
TOPBP1-209ENST00000513818 FRMPD3Q5JV73 1810 aa11.25□□□□□ -0.61
TOPBP1-209ENST00000513818 hCG_1984214I3L0E3 225 aa11.25□□□□□ -0.61
TOPBP1-209ENST00000513818 SNAI1O95863 264 aaPredicted RBP11.25□□□□□ -0.61
TOPBP1-209ENST00000513818 XRCC5P13010 732 aaKnown RBP11.25□□□□□ -0.61
TOPBP1-209ENST00000513818 CCND3P30281 292 aaPredicted RBP11.25□□□□□ -0.61
TOPBP1-209ENST00000513818 GHRHRQ02643 423 aa11.25□□□□□ -0.61
TOPBP1-209ENST00000513818 CACNB2Q08289 660 aaPredicted RBP11.25□□□□□ -0.61
TOPBP1-209ENST00000513818 TRAF1Q13077 416 aa11.25□□□□□ -0.61
TOPBP1-209ENST00000513818 OLFML2BQ68BL8 750 aa11.25□□□□□ -0.61
TOPBP1-209ENST00000513818 ZNF713Q8N859 430 aaPredicted RBP11.25□□□□□ -0.61
TOPBP1-209ENST00000513818 RGS22Q8NE09 1264 aa11.25□□□□□ -0.61
TOPBP1-209ENST00000513818 CCDC148Q8NFR7 591 aa11.25□□□□□ -0.61
TOPBP1-209ENST00000513818 PXYLP1Q8TE99 480 aa11.25□□□□□ -0.61
TOPBP1-209ENST00000513818 RMDN3Q96TC7 470 aa11.25□□□□□ -0.61
TOPBP1-209ENST00000513818 TINF2Q9BSI4 451 aa11.25□□□□□ -0.61
TOPBP1-209ENST00000513818 UNC93B1Q9H1C4 597 aa11.25□□□□□ -0.61
TOPBP1-209ENST00000513818 RIC8AQ9NPQ8 531 aa11.25□□□□□ -0.61
TOPBP1-209ENST00000513818 PXMP2Q9NR77 195 aa11.25□□□□□ -0.61
TOPBP1-209ENST00000513818 SLC5A4Q9NY91 659 aa11.25□□□□□ -0.61
TOPBP1-209ENST00000513818 ESYT2A0FGR8 921 aa11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 IGHA2P01877 340 aa11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 MYCLP12524 364 aaPredicted RBP11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 GJB2P29033 226 aa11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 CUL4AQ13619 759 aa11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 NPY5RQ15761 445 aa11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 PKN2Q16513 984 aaKnown RBP11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 TMEM63BQ5T3F8 832 aa11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 ARHGEF16Q5VV41 709 aa11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 MFSD14CQ5VZR4 134 aa11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 ZNF467Q7Z7K2 595 aaPredicted RBP11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 TNS4Q8IZW8 715 aa11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 REXO1Q8N1G1 1221 aaKnown RBP11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 FAM184AQ8NB25 1140 aa11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 OXER1Q8TDS5 423 aa11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 CCDC12Q8WUD4 166 aaPredicted RBP11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 SNX21Q969T3 373 aa11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 ZNF333Q96JL9 665 aa11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 PDCD2LQ9BRP1 358 aa11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 LLPHQ9BRT6 129 aaKnown RBP11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 ANO3Q9BYT9 981 aa11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 ZMYND12Q9H0C1 365 aa11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 C6orf50Q9HD87 102 aa11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 ADD3Q9UEY8 706 aaKnown RBP11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 PCDHA6Q9UN73 950 aa11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 DIS3Q9Y2L1 958 aaKnown RBP11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 PCDHA8Q9Y5H6 950 aa11.24□□□□□ -0.61
TOPBP1-209ENST00000513818 FAM205CA6NFA0 338 aa11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 SPDYE3A6NKU9 549 aa11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 PIK3CDO00329 1044 aa11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 CYBAP13498 195 aa11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 CCL5P13501 91 aa11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 CNGA1P29973 690 aa11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 CLK2P49760 499 aaKnown RBP11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 MRPL12P52815 198 aaKnown RBP11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 HMGN5P82970 282 aaKnown RBP11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 PDE4DQ08499 809 aa11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 PGM5Q15124 567 aa11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 MAP3K21Q5TCX8 1036 aa11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 ARMC5Q96C12 935 aa11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 PHF20Q9BVI0 1012 aa11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 KATNBL1Q9H079 304 aa11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 PDGFCQ9NRA1 345 aa11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 PCDHA4Q9UN74 947 aa11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 SMC3Q9UQE7 1217 aa11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 FRMPD4Q14CM0 1322 aa11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 RPTORQ8N122 1335 aa11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 SYNGAP1Q96PV0 1343 aa11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 MYH7BA7E2Y1 1941 aa11.23□□□□□ -0.61
TOPBP1-209ENST00000513818 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.22□□□□□ -0.61
TOPBP1-209ENST00000513818 ASB14A6NK59 587 aa11.22□□□□□ -0.61
TOPBP1-209ENST00000513818 ADCY6O43306 1168 aa11.22□□□□□ -0.61
TOPBP1-209ENST00000513818 SORBS3O60504 671 aa11.22□□□□□ -0.61
TOPBP1-209ENST00000513818 ZNF865P0CJ78 1059 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms