RNA–Protein interactions for RNA: ENST00000513794.1

TRIM23-207, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-207ENST00000513794 PDGFCQ9NRA1 345 aa13.54□□□□□ -0.24
TRIM23-207ENST00000513794 SMCHD1A6NHR9 2005 aa13.54□□□□□ -0.24
TRIM23-207ENST00000513794 B4DLN1 442 aa13.53□□□□□ -0.24
TRIM23-207ENST00000513794 KBTBD13C9JR72 458 aa13.53□□□□□ -0.24
TRIM23-207ENST00000513794 SMARCA1P28370 1054 aa13.53□□□□□ -0.24
TRIM23-207ENST00000513794 ADCYAP1R1P41586 468 aa13.53□□□□□ -0.24
TRIM23-207ENST00000513794 MRPL12P52815 198 aaKnown RBP13.53□□□□□ -0.24
TRIM23-207ENST00000513794 ATN1P54259 1190 aaPredicted RBP13.53□□□□□ -0.24
TRIM23-207ENST00000513794 TNFAIP2Q03169 654 aa13.53□□□□□ -0.24
TRIM23-207ENST00000513794 PDE4DQ08499 809 aa13.53□□□□□ -0.24
TRIM23-207ENST00000513794 APOBRQ0VD83 1088 aa13.53□□□□□ -0.24
TRIM23-207ENST00000513794 LRRC41Q15345 812 aa13.53□□□□□ -0.24
TRIM23-207ENST00000513794 RNF180Q86T96 592 aa13.53□□□□□ -0.24
TRIM23-207ENST00000513794 SGMS1Q86VZ5 419 aa13.53□□□□□ -0.24
TRIM23-207ENST00000513794 SYTL5Q8TDW5 730 aaPredicted RBP13.53□□□□□ -0.24
TRIM23-207ENST00000513794 BRF1Q92994 677 aa13.53□□□□□ -0.24
TRIM23-207ENST00000513794 MPHOSPH6Q99547 160 aaKnown RBP13.53□□□□□ -0.24
TRIM23-207ENST00000513794 SEC63Q9UGP8 760 aaKnown RBP13.53□□□□□ -0.24
TRIM23-207ENST00000513794 ASTN1O14525 1302 aa13.53□□□□□ -0.24
TRIM23-207ENST00000513794 HTTP42858 3142 aa13.53□□□□□ -0.24
TRIM23-207ENST00000513794 BAZ2BQ9UIF8 2168 aaKnown RBP13.52□□□□□ -0.24
TRIM23-207ENST00000513794 DYNC1LI2O43237 492 aaPredicted RBP13.52□□□□□ -0.25
TRIM23-207ENST00000513794 EPB41L2O43491 1005 aaKnown RBP13.52□□□□□ -0.25
TRIM23-207ENST00000513794 GALR2O43603 387 aaPredicted RBP13.52□□□□□ -0.25
TRIM23-207ENST00000513794 EIF5BO60841 1220 aaKnown RBP13.52□□□□□ -0.25
TRIM23-207ENST00000513794 RPS6KB1P23443 525 aa13.52□□□□□ -0.25
TRIM23-207ENST00000513794 HOXA13P31271 388 aaPredicted RBP13.52□□□□□ -0.25
TRIM23-207ENST00000513794 HABP4Q5JVS0 413 aaKnown RBP13.52□□□□□ -0.25
TRIM23-207ENST00000513794 ARHGEF16Q5VV41 709 aa13.52□□□□□ -0.25
TRIM23-207ENST00000513794 IQSEC1Q6DN90 963 aa13.52□□□□□ -0.25
TRIM23-207ENST00000513794 APOA5Q6Q788 366 aa13.52□□□□□ -0.25
TRIM23-207ENST00000513794 FCHSD1Q86WN1 690 aa13.52□□□□□ -0.25
TRIM23-207ENST00000513794 DNERQ8NFT8 737 aa13.52□□□□□ -0.25
TRIM23-207ENST00000513794 VTI1AQ96AJ9 217 aa13.52□□□□□ -0.25
TRIM23-207ENST00000513794 RMDN3Q96TC7 470 aa13.52□□□□□ -0.25
TRIM23-207ENST00000513794 SPC25Q9HBM1 224 aa13.52□□□□□ -0.25
TRIM23-207ENST00000513794 NR2E3Q9Y5X4 410 aa13.52□□□□□ -0.25
TRIM23-207ENST00000513794 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.51□□□□□ -0.25
TRIM23-207ENST00000513794 GOLGA8AA7E2F4 631 aa13.51□□□□□ -0.25
TRIM23-207ENST00000513794 GOLGA8BA8MQT2 603 aa13.51□□□□□ -0.25
TRIM23-207ENST00000513794 GCOM1H8Y6P7 765 aaPredicted RBP13.51□□□□□ -0.25
TRIM23-207ENST00000513794 DNM1LO00429 736 aa13.51□□□□□ -0.25
TRIM23-207ENST00000513794 DUSP11O75319 330 aaKnown RBP13.51□□□□□ -0.25
TRIM23-207ENST00000513794 POLR2MP0CAP2 368 aa13.51□□□□□ -0.25
TRIM23-207ENST00000513794 IRX5P78411 483 aaPredicted RBP13.51□□□□□ -0.25
TRIM23-207ENST00000513794 RTN1Q16799 776 aa13.51□□□□□ -0.25
TRIM23-207ENST00000513794 TAPT1Q6NXT6 567 aa13.51□□□□□ -0.25
TRIM23-207ENST00000513794 RUFY3Q7L099 469 aa13.51□□□□□ -0.25
TRIM23-207ENST00000513794 FBXO16Q8IX29 292 aaPredicted RBP13.51□□□□□ -0.25
TRIM23-207ENST00000513794 NSUN6Q8TEA1 469 aaKnown RBP13.51□□□□□ -0.25
TRIM23-207ENST00000513794 SPZ1Q9BXG8 430 aa13.51□□□□□ -0.25
TRIM23-207ENST00000513794 KATNBL1Q9H079 304 aa13.51□□□□□ -0.25
TRIM23-207ENST00000513794 AP5M1Q9H0R1 490 aa13.51□□□□□ -0.25
TRIM23-207ENST00000513794 ZSWIM6Q9HCJ5 1215 aa13.51□□□□□ -0.25
TRIM23-207ENST00000513794 COL20A1Q9P218 1284 aa13.51□□□□□ -0.25
TRIM23-207ENST00000513794 CYP46A1Q9Y6A2 500 aa13.51□□□□□ -0.25
TRIM23-207ENST00000513794 V9GY48 417 aaPredicted RBP13.51□□□□□ -0.25
TRIM23-207ENST00000513794 BRCA2P51587 3418 aa13.51□□□□□ -0.25
TRIM23-207ENST00000513794 CENPFP49454 3210 aa13.51□□□□□ -0.25
TRIM23-207ENST00000513794 H0YGN5 161 aa13.5□□□□□ -0.25
TRIM23-207ENST00000513794 OPLAHO14841 1288 aa13.5□□□□□ -0.25
TRIM23-207ENST00000513794 C6orf222P0C671 652 aaPredicted RBP13.5□□□□□ -0.25
TRIM23-207ENST00000513794 COL6A1P12109 1028 aa13.5□□□□□ -0.25
TRIM23-207ENST00000513794 MYCLP12524 364 aaPredicted RBP13.5□□□□□ -0.25
TRIM23-207ENST00000513794 SMPD1P17405 629 aa13.5□□□□□ -0.25
TRIM23-207ENST00000513794 EIF2AK2P19525 551 aaKnown RBP13.5□□□□□ -0.25
TRIM23-207ENST00000513794 ADD1P35611 737 aaKnown RBP13.5□□□□□ -0.25
TRIM23-207ENST00000513794 KCNA10Q16322 511 aa13.5□□□□□ -0.25
TRIM23-207ENST00000513794 GNASQ5JWF2 1037 aa13.5□□□□□ -0.25
TRIM23-207ENST00000513794 TMEM63BQ5T3F8 832 aa13.5□□□□□ -0.25
TRIM23-207ENST00000513794 TMTC3Q6ZXV5 915 aa13.5□□□□□ -0.25
TRIM23-207ENST00000513794 C7orf61Q8IZ16 206 aa13.5□□□□□ -0.25
TRIM23-207ENST00000513794 MORC4Q8TE76 937 aa13.5□□□□□ -0.25
TRIM23-207ENST00000513794 WDR11Q9BZH6 1224 aa13.5□□□□□ -0.25
TRIM23-207ENST00000513794 UPF3BQ9BZI7 483 aaKnown RBP13.5□□□□□ -0.25
TRIM23-207ENST00000513794 MAF1Q9H063 256 aa13.5□□□□□ -0.25
TRIM23-207ENST00000513794 VTA1Q9NP79 307 aa13.5□□□□□ -0.25
TRIM23-207ENST00000513794 RBM28Q9NW13 759 aaKnown RBP13.5□□□□□ -0.25
TRIM23-207ENST00000513794 ZNF236Q9UL36 1845 aa13.49□□□□□ -0.25
TRIM23-207ENST00000513794 TTLL13PA6NNM8 815 aa13.49□□□□□ -0.25
TRIM23-207ENST00000513794 ADCY6O43306 1168 aa13.49□□□□□ -0.25
TRIM23-207ENST00000513794 SEC24BO95487 1268 aa13.49□□□□□ -0.25
TRIM23-207ENST00000513794 PTGS1P23219 599 aa13.49□□□□□ -0.25
TRIM23-207ENST00000513794 METAP2P50579 478 aaKnown RBP eCLIP13.49□□□□□ -0.25
TRIM23-207ENST00000513794 STXBP2Q15833 593 aa13.49□□□□□ -0.25
TRIM23-207ENST00000513794 LRRC26Q2I0M4 334 aa13.49□□□□□ -0.25
TRIM23-207ENST00000513794 SLC39A5Q6ZMH5 540 aa13.49□□□□□ -0.25
TRIM23-207ENST00000513794 SEPT14Q6ZU15 432 aa13.49□□□□□ -0.25
TRIM23-207ENST00000513794 SMARCC2Q8TAQ2 1214 aa13.49□□□□□ -0.25
TRIM23-207ENST00000513794 CUL5Q93034 780 aa13.49□□□□□ -0.25
TRIM23-207ENST00000513794 PDRG1Q9NUG6 133 aa13.49□□□□□ -0.25
TRIM23-207ENST00000513794 MAP3K20Q9NYL2 800 aaKnown RBP13.49□□□□□ -0.25
TRIM23-207ENST00000513794 SYNRGQ9UMZ2 1314 aa13.48□□□□□ -0.25
TRIM23-207ENST00000513794 LOC102724159A0A0B4J2E5 919 aa13.48□□□□□ -0.25
TRIM23-207ENST00000513794 CCDC196A0A1B0GTZ2 297 aa13.48□□□□□ -0.25
TRIM23-207ENST00000513794 MYADML2A6NDP7 307 aa13.48□□□□□ -0.25
TRIM23-207ENST00000513794 NR3C2P08235 984 aa13.48□□□□□ -0.25
TRIM23-207ENST00000513794 TXNP10599 105 aaKnown RBP13.48□□□□□ -0.25
TRIM23-207ENST00000513794 CDC27P30260 824 aa13.48□□□□□ -0.25
TRIM23-207ENST00000513794 HSD17B4P51659 736 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms